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alizadehsani--r
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Disease diagnosis with a hybrid method SVR using NSGA-II
, Article Neurocomputing ; Vol. 136 , 2014 , pp. 14-29 ; Habibi, J ; Alizadehsani, R ; Sharif University of Technology
2014
Abstract
Early diagnosis of any disease at a lower cost is preferable. Automatic medical diagnosis classification tools reduce financial burden on health care systems. In medical diagnosis, patterns consist of observable symptoms and the results of diagnostic tests, which have various associated costs and risks. In this paper, we have experimented and suggested an automated pattern classification method for classifying four diseases into two classes. In the literature on machine learning or data mining, regression and classification problems are typically viewed as two distinct problems differentiated by continuous or categorical dependent variables. There are endeavors to use regression methods to...
Diagnosis of coronary artery disease using cost-sensitive algorithms
, Article Proceedings - 12th IEEE International Conference on Data Mining Workshops, ICDMW 2012 ; 2012 , Pages 9-16 ; 9780769549255 (ISBN) ; Hosseini, M. J ; Sani, Z. A ; Ghandeharioun, A ; Boghrati, R ; Sharif University of Technology
2012
Abstract
One of the main causes of death the world over are cardiovascular diseases, of which coronary artery disease (CAD) is a major type. This disease occurs when the diameter narrowing of one of the left anterior descending, left circumflex, or right coronary arteries is equal to or greater than 50 percent. Angiography is the principal diagnostic modality for the stenosis of heart vessels; however, because of its complications and costs, researchers are looking for alternative methods such as data mining. This study conducts data mining algorithms on the Z-Alizadeh Sani dataset which has been collected from 303 random visitors to Tehran's Shaheed Rajaei Cardiovascular, Medical and Research...
Diagnosis of coronary artery disease using data mining techniques based on symptoms and ECG features
, Article European Journal of Scientific Research ; Volume 82, Issue 4 , Aug , 2012 , Pages 542-553 ; 1450216X (ISSN) ; Habibi, J ; Hosseini, M. J ; Boghrati, R ; Ghandeharioun, A ; Bahadorian, B ; Sani, Z. A ; Sharif University of Technology
EuroJournals, Inc
2012
Abstract
The most common heart disease is Coronary artery disease (CAD). CAD is one of the main causes of heart attacks and deaths across the globe. Early diagnosis of this disease is therefore, of great importance. A large number of methods have thus far been devised for diagnosing CAD. Most of these techniques have been conducted on the basis of the Irvine dataset (University of California), which not only has a limited number of features but is also full of missing values and thus lacks reliability. The present study was designed to seek a new set, free from missing values, comprising features such as the functional class, dyspnea, Q wave, ST elevation, ST depression, and T inversion. Information...
Intralesional immunotherapy compared to cryotherapy in the treatment of warts
, Article International Journal of Dermatology ; Volume 56, Issue 4 , 2017 , Pages 474-478 ; 00119059 (ISSN) ; Jabbari Azad, F ; Mahboubi Oskouei, Y ; Jafari, M ; Tehranian, S ; Alizadehsani, R ; Layegh, P ; Sharif University of Technology
Blackwell Publishing Ltd
2017
Abstract
Background: Warts are the most common clinical manifestation of the human papilloma-virus infection in the skin and mucous membranes. In spite of the various therapeutic modalities for nongenital skin warts, there is still no single method to be used as an approved treatment. In this study, we compared the efficacy of immunotherapy and cryotherapy on wart lesions. Methods: Sixty patients with verruca vulgaris and plantar warts were randomly divided into two groups. One group received intralesional injection of candida antigen repeated every 3 weeks until complete improvement of all warts or for a maximum of three sessions. The second group was treated by cryotherapy with liquid nitrogen for...
A data mining approach for diagnosis of coronary artery disease
, Article Computer Methods and Programs in Biomedicine ; Volume 111, Issue 1 , 2013 , Pages 52-61 ; 01692607 (ISSN) ; Habibi, J ; Hosseini, M. J ; Mashayekhi, H ; Boghrati, R ; Ghandeharioun, A ; Bahadorian, B ; Sani, Z. A ; Sharif University of Technology
2013
Abstract
Cardiovascular diseases are very common and are one of the main reasons of death. Being among the major types of these diseases, correct and in-time diagnosis of coronary artery disease (CAD) is very important. Angiography is the most accurate CAD diagnosis method; however, it has many side effects and is costly. Existing studies have used several features in collecting data from patients, while applying different data mining algorithms to achieve methods with high accuracy and less side effects and costs. In this paper, a dataset called Z-Alizadeh Sani with 303 patients and 54 features, is introduced which utilizes several effective features. Also, a feature creation method is proposed to...
Coronary artery disease detection using computational intelligence methods
, Article Knowledge-Based Systems ; Volume 109 , 2016 , Pages 187-197 ; 09507051 (ISSN) ; Zangooei, M. H ; Hosseini, M. J ; Habibi, J ; Khosravi, A ; Roshanzamir, M ; Khozeimeh, F ; Sarrafzadegan, N ; Nahavandi, S ; Sharif University of Technology
Elsevier B.V
2016
Abstract
Nowadays, cardiovascular diseases are very common and are one of the main causes of death worldwide. One major type of such diseases is the coronary artery disease (CAD). The best and most accurate method for the diagnosis of CAD is angiography, which has significant complications and costs. Researchers are, therefore, seeking novel modalities for CAD diagnosis via data mining methods. To that end, several algorithms and datasets have been developed. However, a few studies have considered the stenosis of each major coronary artery separately. We attempted to achieve a high rate of accuracy in the diagnosis of the stenosis of each major coronary artery. Analytical methods were used to...
Network vulnerability analysis through vulnerability take-grant model (VTG)
, Article 7th International Conference on Information and Communications Security, ICICS 2005, Beijing, 10 December 2005 through 13 December 2005 ; Volume 3783 LNCS , 2005 , Pages 256-268 ; 03029743 (ISSN); 3540309349 (ISBN); 9783540309345 (ISBN) ; Sadoddin, R ; Jalili, R ; Zakeri, R ; Omidian, A. R ; Sharif University of Technology
2005
Abstract
Modeling and analysis of information system vulnerabilities helps us to predict possible attacks to networks using the network configuration and vulnerabilities information. As a fact, exploiting most of vulnerabilities result in access rights alteration. In this paper, we propose a new vulnerability analysis method based on the Take-Grant protection model. We extend the initial Take-Grant model to address the notion of vulnerabilities and introduce the vulnerabilities rewriting rules to specify how the protection state of the system can be changed by exploiting vulnerabilities. Our analysis is based on a bounded polynomial algorithm, which generates the closure of the Take-Grant graph...
Sequence dependence of the binding energy in chaperone-driven polymer translocation through a nanopore
, Article Physical Review E - Statistical, Nonlinear, and Soft Matter Physics ; Volume 83, Issue 1 , January , 2011 ; 15393755 (ISSN) ; Ejtehadi, M. R ; Metzler, R ; Sharif University of Technology
2011
Abstract
We study the translocation of stiff polymers through a nanopore, driven by the chemical-potential gradient exerted by binding proteins (chaperones) on the trans side of the pore. Bound chaperones prevent backsliding through the pore and, therefore, partially rectify the polymer passage. We show that the sequence of chain monomers with different binding affinity for the chaperones significantly affects the translocation dynamics. In particular, we investigate the effect of the nearest-neighbor adjacency probability of the two monomer types. Depending on the magnitude of the involved binding energies, the translocation speed may either increase or decrease with the adjacency probability. We...
First passage time distribution of chaperone driven polymer translocation through a nanopore: Homopolymer and heteropolymer cases
, Article Journal of Chemical Physics ; Volume 135, Issue 24 , 2011 ; 00219606 (ISSN) ; Metzler, R ; Ejtehadi, M. R ; Sharif University of Technology
2011
Abstract
Combining the advection-diffusion equation approach with Monte Carlo simulations we study chaperone driven polymer translocation of a stiff polymer through a nanopore. We demonstrate that the probability density function of first passage times across the pore depends solely on the Péclet number, a dimensionless parameter comparing drift strength and diffusivity. Moreover it is shown that the characteristic exponent in the power-law dependence of the translocation time on the chain length, a function of the chaperone-polymer binding energy, the chaperone concentration, and the chain length, is also effectively determined by the Péclet number. We investigate the effect of the chaperone size on...
Reply: Abedpour, asgari, and tabar
, Article Physical Review Letters ; Volume 106, Issue 20 , 2011 ; 00319007 (ISSN) ; Asgari, R ; Tabar, M. R. R ; Sharif University of Technology
2011
Irreversibility in response to forces acting on graphene sheets
, Article Physical Review Letters ; Volume 104, Issue 19 , May , 2010 ; 00319007 (ISSN) ; Asgari, R ; Tabar, M. R. R ; Sharif University of Technology
2010
Abstract
The amount of rippling in graphene sheets is related to the interactions with the substrate or with the suspending structure. Here, we report on an irreversibility in the response to forces that act on suspended graphene sheets. This may explain why one always observes a ripple structure on suspended graphene. We show that a compression-relaxation mechanism produces static ripples on graphene sheets and determine a peculiar temperature Tc, such that for T
Analysis of design goals of cryptography algorithms based on different components
, Article Indonesian Journal of Electrical Engineering and Computer Science ; Volume 23, Issue 1 , 2021 , Pages 540-548 ; 25024752 (ISSN) ; Aref, M. R ; Khorshiddoust, R. R ; Sharif University of Technology
Institute of Advanced Engineering and Science
2021
Abstract
Cryptography algorithms are a fundamental part of a cryptographic system that is designed and implemented to increase information security. They are the center of attention of experts in the information technology domains. Although the cryptography algorithms are implemented to attain the goals such as confidentially, integrity, and authenticity of designing, but other matters that must be noticed by designers include speed, resource consumption, reliability, flexibility, usage type, and so on. For the useful allocation of hardware, software, and human resources, it is important to identify the role of each of the factors influencing the design of cryptographic algorithms to invest in the...
Conservation of statistical results under the reduction of pair-contact interactions to solvation interactions
, Article Physical Review E - Statistical, Nonlinear, and Soft Matter Physics ; Volume 72, Issue 6 , 2005 ; 15393755 (ISSN) ; Farzami, R. R ; Ejtehadi, M. R ; Sharif University of Technology
2005
Abstract
We show that the hydrophobicity of sequences is the leading term in Miyazawa-Jernigan interactions. Being the source of additive (solvation) terms in pair-contact interactions, they were used to reduce the energy parameters while resulting in a clear vector manipulation of energy. The reduced (additive) potential performs considerably successful in predicting the statistical properties of arbitrary structures. The evaluated designabilities of the structures by both models are highly correlated. Suggesting geometrically nondegenerate vectors (structures) as proteinlike structures, the additive model is a powerful tool for protein design. Moreover, a crossing point in the log-linear diagram of...
Multifunctional hyperelastic structured surface for tunable and switchable transparency
, Article Applied Sciences (Switzerland) ; Volume 11, Issue 5 , 2021 , Pages 1-11 ; 20763417 (ISSN) ; Goudarzi, T ; Fleury, R ; Naghdabadi, R ; Sharif University of Technology
MDPI AG
2021
Abstract
We leverage the crucial hyperelastic properties of a multifunctional structured surface to optimize the reconfigurability of the electromagnetic transmission under large nonlinear mechanical deformations. This multiphysics, multifunctional, hyperelastic structured surface (HSS) offers two simultaneous intriguing functionalities; tunability and switchability. It is made of copper reso-nators and a Polydimethylsiloxane (PDMS) substrate, which is one of the most favorable deformable substrates due to its hyperelastic behavior. The proposed HSS is fabricated via an original cost-effective technique and the multiphysics functionalities are captured in both experimental tests and numerical...
MaxHiC: A robust background correction model to identify biologically relevant chromatin interactions in Hi-C and capture Hi-C experiments
, Article PLoS Computational Biology ; Volume 18, Issue 6 , 2022 ; 1553734X (ISSN) ; Modegh, R. G ; Rabiee, H. R ; Sarbandi, E. R ; Rezaie, N ; Tam, K. T ; Forrest, A. R. R ; Sharif University of Technology
Public Library of Science
2022
Abstract
Hi-C is a genome-wide chromosome conformation capture technology that detects interactions between pairs of genomic regions and exploits higher order chromatin structures. Conceptually Hi-C data counts interaction frequencies between every position in the genome and every other position. Biologically functional interactions are expected to occur more frequently than transient background and artefactual interactions. To identify biologically relevant interactions, several background models that take biases such as distance, GC content and mappability into account have been proposed. Here we introduce MaxHiC, a background correction tool that deals with these complex biases and robustly...
SER of M-PSK modulation in incremental-selective decode-and-forward cooperative communications over Rayleigh fading channels
, Article International Conference on Advanced Communication Technology, ICACT, 13 February 2011 through 16 February 2011 ; February , 2011 , Pages 432-437 ; 17389445 (ISSN) ; 9788955191554 (ISBN) ; Saadat, R ; Aref, M. R ; Mirjalily, G ; Sharif University of Technology
2011
Abstract
In this paper we consider a cooperative communication systems over Rayleigh fading channels. The system utilizes a combination of incremental and selective decode-and-forward (ISDF) relaying protocols. The symbol error rate (SER) of M-PSK modulation for the ISDF protocol is derived. Using an approximation of the SER expression, the optimal power allocation is investigated. In order to reduce the complexity of the receiver, we used a modified version of the ISDF protocol which does not use the storage or retransmission of the first phase signal. We also derived optimal power allocation coefficient for modified ISDF. It has been noted that for the optimal power allocation in the ISDF protocol,...
Power allocation for incremental-selective decode-and-forward cooperative communications over Rician fading channels
, Article International Conference on Advanced Communication Technology, ICACT, 13 February 2011 through 16 February 2011 ; February , 2011 , Pages 730-734 ; 17389445 (ISSN) ; 9788955191554 (ISBN) ; Saadat, R ; Aref, M. R ; Mirjalily, G ; Sharif University of Technology
2011
Abstract
In this paper we consider a relaying communication system over Rician fading channels. In this system we assume simple Incremental-Selective Decode-and-Forward (ISDF) protocol, which is jointly combining incremental and selective DF relaying protocols. In this protocol, storage or retransmission of the first phase signal are not allowed. We analyze the symbol error rate (SER) performance of the recommended protocol with M-PSK modulation. We evaluate the performance of the protocol in the frequency nonselective slow Rician fading channels. Using the approximation of the SER expression, the optimal power allocation is investigated. Our results show that at least 50% of total power must be used...
Efficient and practical protocol for silylation of hydroxyl groups using reusable lithium perchlorate dispread in silica gel under neutral condition [electronic resource]
, Article Journal of Organometallic Chemistry ; 2006, Volume 691, Issue 5, Pages 817–820 ; Yousefi, R ; Saidi, M. R ; Sharif University of Technology
Abstract
A very efficient and mild procedure for the trimethylsilylation of a wide variety of alcohols, including primary, allylic, benzylic, secondary, hindered secondary, tertiary, and phenols with hexamethyldisilazane on the surface of silica gel dispersed with LiClO4 in room temperature at few minutes in excellent yields under neutral conditions is reported. This procedure also allows the excellent selectivity under LP-SiO2 system for silylation of alcohols in the presence of amine and phenolic hydroxy groups
Modeling, estimation, and model predictive control for Covid-19 pandemic with finite security duration vaccine
, Article 30th International Conference on Electrical Engineering, ICEE 2022, 17 May 2022 through 19 May 2022 ; 2022 , Pages 78-83 ; 9781665480871 (ISBN) ; Baghbadorani, R. R ; Sharif University of Technology
Institute of Electrical and Electronics Engineers Inc
2022
Abstract
Spreading Covid19 has significantly impacted humans' affairs worldwide, either economically or in a sanitary manner. Besides social distance and hospitalization, making and introducing different vaccines help us ameliorate infection and mortality rates. In this research, we use a nonlinear dynamic model for Covid19, with eight states named susceptible, exposed, infected, quarantined, hospitalized, recovered, deceased, and insusceptible populations. Also, we use social distancing, hospitalization, and vaccination rate as three control inputs. This research aims to stop the Covid-19 from spreading worldwide and minimize exposed, infected and deceased populations using model predictive control....
Search for turbulent gas through interstellar scintillation
, Article Proceedings of the International Astronomical Union ; Volume 7, Issue S285 , 2011 , Pages 376-378 ; 17439213 (ISSN) ; 9781107019850 (ISBN) ; Ansari, R ; Habibi, F ; Rahvar, S ; Griffin R. E ; Hanisch R. J ; Seaman R. L ; Sharif University of Technology
2011
Abstract
Stars twinkle because their light propagates through the atmosphere. The same phenomenon is expected when the light of remote stars crosses a Galactic - disk or halo - refractive medium such as a molecular cloud. We present the promising results of a test performed with the ESO-NTT, and consider its potential