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    A correlative model to predict in vivo AUC for nanosystem drug delivery with release rate-limited absorption

    , Article Journal of Pharmacy and Pharmaceutical Sciences ; Volume 15, Issue 4 , 2012 , Pages 583-591 ; 14821826 (ISSN) Barzegar Jalali, M ; Mohammadi, K ; Mohammadi, G ; Valizadeh, H ; Barzegar Jalali, A ; Adibkia, K ; Nokhodchi, A ; Sharif University of Technology
    2012
    Abstract
    Purpose. Drug release from nanosystems at the sites of either absorption or effect biophase is a major determinant of its biological action. Thus, in vitro drug release is of paramount importance in gaining insight for the systems performance in vivo. Methods. A novel in vitro in vivo correlation, IVIVC, model denoted as double reciprocal area method was presented and applied to 19 drugs from 55 nano formulations with total 336 data, gathered from literature. Results. The proposed model correlated the in vitro with in vivo parameters with overall error of 12.4 ± 3.9%. Also the trained version of the model predicted the test formulations with overall error of 15.8 ± 3.7% indicating the... 

    Brain tumor segmentation based on 3D neighborhood features using rule-based learning

    , Article 11th International Conference on Machine Vision, ICMV 2018, 1 November 2018 through 3 November 2018 ; Volume 11041 , 2019 ; 0277786X (ISSN); 9781510627482 (ISBN) Barzegar, Z ; Jamzad, M ; Sharif University of Technology
    SPIE  2019
    Abstract
    In order to plan precise treatment or accurate tumor removal surgery, brain tumor segmentation is critical for detecting all parts of tumor and its surrounding tissues. To visualize brain anatomy and detect its abnormalities, we use multi-modal Magnetic Resonance Imaging (MRI) as input. This paper introduces an efficient and automated algorithm based on the 3D bit-plane neighborhood concept for Brain Tumor segmentation using a rule-based learning algorithm. In the proposed approach, in addition to using intensity values in each slice, we consider sets of three consecutive slices to extract information from 3D neighborhood. We construct a Rule base using sequential covering algorithm. Through... 

    Brain tumor segmentation based on 3D neighborhood features using rule-based learning

    , Article 11th International Conference on Machine Vision, ICMV 2018, 1 November 2018 through 3 November 2018 ; Volume 11041 , 2019 ; 0277786X (ISSN) ; 9781510627482 (ISBN) Barzegar, Z ; Jamzad, M ; Sharif University of Technology
    SPIE  2019
    Abstract
    In order to plan precise treatment or accurate tumor removal surgery, brain tumor segmentation is critical for detecting all parts of tumor and its surrounding tissues. To visualize brain anatomy and detect its abnormalities, we use multi-modal Magnetic Resonance Imaging (MRI) as input. This paper introduces an efficient and automated algorithm based on the 3D bit-plane neighborhood concept for Brain Tumor segmentation using a rule-based learning algorithm. In the proposed approach, in addition to using intensity values in each slice, we consider sets of three consecutive slices to extract information from 3D neighborhood. We construct a Rule base using sequential covering algorithm. Through... 

    A reliable ensemble-based classification framework for glioma brain tumor segmentation

    , Article Signal, Image and Video Processing ; Volume 14, Issue 8 , 2020 , Pages 1591-1599 Barzegar, Z ; Jamzad, M ; Sharif University of Technology
    Springer Science and Business Media Deutschland GmbH  2020
    Abstract
    Glioma is one of the most frequent primary brain tumors in adults that arise from glial cells. Automatic and accurate segmentation of glioma is critical for detecting all parts of tumor and its surrounding tissues in cancer detection and surgical planning. In this paper, we present a reliable classification framework for detection and segmentation of abnormal tissues including brain glioma tumor portions such as edemas and tumor core. This framework learns weighted features extracted from the 3D cubic neighborhoods regarding to gray-level differences that indicate the spatial relationships among voxels. In addition to intensity values in each slice, we consider sets of three consecutive... 

    Numerical study of Geostationary Orbit thermal cycle effects of a tubular adhesive joint: Dynamic behavior

    , Article Journal of Adhesion ; Volume 96, Issue 16 , 2020 , Pages 1431-1448 Barzegar, M ; Mokhtari, M ; Sharif University of Technology
    Bellwether Publishing, Ltd  2020
    Abstract
    Space environments have a significant influence on advanced composite structures and adhesive joints. Degradation in the mechanical properties of aerospace materials changes the dynamic behavior of the structures and adhesive joints. In this paper, a typical tubular adhesive joint with material degradation due to geostationary orbit (GEO) thermal cycles has been studied numerically with Python scripts. Adhesive joint geometry and boundary conditions are the main parametric study parameters. The results show that the first non–zero natural frequencies of the clamped-free tubular adhesive joint decreased due to mechanical property degradation. A dynamic behavior comparison of the degradation... 

    WLFS: Weighted label fusion learning framework for glioma tumor segmentation in brain MRI

    , Article Biomedical Signal Processing and Control ; Volume 68 , 2021 ; 17468094 (ISSN) Barzegar, Z ; Jamzad, M ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    Glioma is a common type of tumor that develops in the brain. Due to many differences in the shape and appearance, accurate segmentation of glioma for identifying all parts of the tumor and its surrounding tissues in cancer detection is a challenging task in cancer detection. In recent researches, the combination of atlas-based segmentation and machine learning methods have presented superior performance over other automatic brain MRI segmentation algorithms. To overcome the side effects of limited existing information on atlas-based segmentation, and the long training and the time consuming phase of learning methods, we proposed a semi-supervised learning framework by introducing a... 

    A rigorous algebraic-analytical method for pore network extraction from micro-tomography images

    , Article Journal of Hydrology ; Volume 590 , 2020 Barzegar, F ; Masihi, M ; Azadi Tabar, M ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Static and dynamic properties of porous media are highly dependent on its internal geometry. CT scan images are generally used to characterize porous media geometry. Direct simulation of fluid flow on CT scan images is possible but considerably time-consuming. In this study, a new method was developed for extracting a simplified representation known as “pore network model” by utilizing a rigorous algebraic-analytical method. By using a moving frame in the 3D matrix of the CT scan image and stepwise identifying-removing of image components, running time for a 4003 voxels sample in a typical computer system decreased to less than 350 s. The identification of throats was based on a new... 

    Progressive damage analysis of an adhesively bonded composite T-joint under bending, considering micro-scale effects of fiber volume fraction of adherends

    , Article Composite Structures ; Volume 258 , 2021 ; 02638223 (ISSN) Barzegar, M ; Davoodi Moallem, M ; Mokhtari, M ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    In this study, a numerical study on failure assessment and stress distribution on the adhesive region in a composite T-joint under bending load case is investigated using cohesive zone method (CZM). The Finite Element Model (FEM) has been verified with experimental results. To study the load transfer capability of the T-joint, five different adhesives are considered in the adhesive region and the effect of geometrical parameters such as stringer thickness, corner radius, and adherend thickness as well as micromechanical properties of reinforced fiber composite adherends are investigated. Effective properties of two composite adherends including Carbon-Epoxy (IM7/8552) and Glass-Epoxy... 

    Finite element modelling of perturbed stellar systems

    , Article Monthly Notices of the Royal Astronomical Society ; Volume 404, Issue 3 , Jan , 2010 , Pages 1519-1528 ; 00358711 (ISSN) Jalali, M. A ; Sharif University of Technology
    2010
    Abstract
    I formulate a general finite element method (FEM) for self-gravitating stellar systems. I split the configuration space to finite elements, and express the potential and density functions over each element in terms of their nodal values and suitable interpolating functions. General expressions are then introduced for the Hamiltonian and phase-space distribution functions of the stars that visit a given element. Using the weighted residual form of Poisson's equation, I derive the Galerkin projection of the perturbed collisionless Boltzmann equation, and assemble the global evolutionary equations of nodal distribution functions. The FEM is highly adaptable to all kinds of potential and density... 

    Unstable disk galaxies. II. the origin of growing and stationary modes

    , Article Astrophysical Journal ; Volume 689, Issue 1 , 2008 , Pages 134-147 ; 0004637X (ISSN) Jalali, M. A ; Sharif University of Technology
    Institute of Physics Publishing  2008
    Abstract
    I decompose the unstable growing modes of stellar disks to their Fourier components and present the physical mechanism of instabilities in the context of resonances. When the equilibrium distribution function is a nonunifonn function of the orbital angular momentum, the capture of stars into the corotation resonance imbalances the disk angular momentum and triggers growing bar and spiral modes. The stellar disk can then recover its angular momentum balance through the response of nonresonant stars. I carry out a complete analysis of orbital structure corresponding to each Fourier component in the radial angle and present a mathematical condition for the occurrence of van Kampen modes, which... 

    Unstable disk galaxies. I. Modal properties

    , Article Astrophysical Journal ; Volume 669, Issue 1 , 2007 , Pages 218-231 ; 0004637X (ISSN) Jalali, M. A ; Sharif University of Technology
    Institute of Physics Publishing  2007
    Abstract
    I utilize the Petrov-Galerkin formulation and develop a new method for solving the unsteady collisionless Boltzmann equation in both the linear and nonlinear regimes. In the first-order approximation, the method reduces to a linear eigen-value problem which is solved using standard numerical methods. I apply the method to the dynamics of a model stellar disk which is embedded in the field of a soft-centered logarithmic potential. The outcome is the full spectrum of eigen-frequencies and their conjugate normal modes for prescribed azimuthal wavenumbers. The results show that the fundamental bar mode is isolated in the frequency space, while spiral modes belong to discrete families that... 

    Global drag-induced instabilities in protoplanetary disks

    , Article Astrophysical Journal ; Volume 772, Issue 1 , 2013 ; 0004637X (ISSN) Jalali, M. A ; Sharif University of Technology
    2013
    Abstract
    We use the Fokker-Planck equation and model the dispersive dynamics of solid particles in annular protoplanetary disks whose gas component is more massive than the particle phase. We model particle-gas interactions as hard sphere collisions, determine the functional form of diffusion coefficients, and show the existence of two global unstable modes in the particle phase. These modes have spiral patterns with the azimuthal wavenumber m = 1 and rotate slowly. We show that in ring-shaped disks, the phase-space density of solid particles increases linearly in time toward an accumulation point near the location of pressure maximum, while instabilities grow exponentially. Therefore, planetesimals... 

    Heat transfer of swirling impinging jets ejected from Nozzles with twisted tapes utilizing CFD technique

    , Article Case Studies in Thermal Engineering ; Volume 6 , September , 2015 , Pages 104-115 ; 2214157X (ISSN) Amini, Y ; Mokhtari, M ; Haghshenasfard, M ; Barzegar Gerdroodbary, M ; Sharif University of Technology
    Elsevier Ltd  2015
    Abstract
    This research investigated the forced convection heat transfer by using the swirling impinging jets. This study focused on nozzles, which equipped with twisted tapes via a numerical approach. The computational domain created by utilizing the fully structured meshes, which had very high quality from the viewpoint of aspect ratio and skewness. The numerical simulations were performed at four different jet-to-plate distances (L/D) of 2, 4, 6 and 8, four Reynolds numbers of 4000, 8000, 12,000 and 16,000, and also four different twist ratios (y/w) of 3, 4, 5 and 6. The mesh-independent tests were conducted based upon the average Nusselt number. The obtained results revealed good agreement with... 

    “It from Bit” and Quantum Mechanics

    , Article Foundations of Science ; 2019 ; 12331821 (ISSN) Barzegar, A ; Shafiee, A ; Taqavi, M ; Sharif University of Technology
    Springer  2019
    Abstract
    John Archibald Wheeler is one of the staunchest advocates of the idea that information is more fundamental than anything else in physics. In this paper, we examine the status of this idea summarized in Wheeler’s slogan ‘it from bit’ in the context of Bohmian Mechanics and spontaneous collapse models. We will argue that any question about the status of ‘it from bit’ crucially depends on the particular interpretation of these theories one favors. © 2019, Springer Nature B.V  

    “It from Bit” and Quantum Mechanics

    , Article Foundations of Science ; 2019 ; 12331821 (ISSN) Barzegar, A ; Shafiee, A ; Taqavi, M ; Sharif University of Technology
    Springer  2019
    Abstract
    John Archibald Wheeler is one of the staunchest advocates of the idea that information is more fundamental than anything else in physics. In this paper, we examine the status of this idea summarized in Wheeler’s slogan ‘it from bit’ in the context of Bohmian Mechanics and spontaneous collapse models. We will argue that any question about the status of ‘it from bit’ crucially depends on the particular interpretation of these theories one favors. © 2019, Springer Nature B.V  

    First-principles study of molecule adsorption on Ni-decorated monolayer MoS2

    , Article Journal of Computational Electronics ; Volume 18, Issue 3 , 2019 , Pages 826-835 ; 15698025 (ISSN) Barzegar, M ; Berahman, M ; Asgari, R ; Sharif University of Technology
    Springer New York LLC  2019
    Abstract
    The interactions between four different gas molecules (methanol, o-xylene, p-xylene and m-xylene) and Ni-decorated monolayer MoS2 were investigated by means of density functional computations to exploit its potential application as a gas sensor. The electronic properties of the Ni-decorated monolayer MoS2 and gas molecule (adsorbent–adsorbate properties) strongly depend on the Ni-decorated monolayer MoS2 structure and the molecular configuration of the adsorbate. The adsorption properties of volatile organic compound (VOC) molecules on Ni-decorated MoS2 has been studied taking into account the parameters such as adsorption energy, energy bandgap, density of states, and Mulliken charge... 

    Zeilinger on information and reality

    , Article Foundations of Science ; Volume 26, Issue 4 , 2021 , Pages 1007-1019 ; 12331821 (ISSN) Barzegar, A ; Taqavi, M ; Shafiee, A ; Sharif University of Technology
    Springer Science and Business Media B.V  2021
    Abstract
    According to Zeilinger’s information interpretation of quantum mechanics ‘the distinction between reality and our knowledge of reality, between reality and information, cannot be made. They are in a deep sense indistinguishable’. This is what we call Zeilinger’s thesis. This thesis has been criticized as a lapse into ‘informational immaterialism’ and amounting to nothing more than a tautology. However, we will argue that this criticism is based on a pre-Kantian view of reality, namely metaphysical realism which could be questioned on the basis of Putnam’s arguments. Furthermore, it will be argued that to understand Zeilinger’s thesis one should abandon the pre-Kantian perspective of... 

    Ultra-low power current mode all- MOS ASK demodulator for radio frequency identification applications

    , Article IET Circuits, Devices and Systems ; Volume 10, Issue 2 , 2016 , Pages 130-134 ; 1751858X (ISSN) Mousavi, N ; Sharifkhani, M ; Jalali, M ; Sharif University of Technology
    Institution of Engineering and Technology  2016
    Abstract
    An ultra-low power amplitude shift keying (ASK) demodulator for radio frequency identification (RFID) tags is presented. On the basis of a fast averaging stage, the proposed ASK-demodulator uses a current domain switching envelope amplifier which yields low-power operation. More importantly, it removes the need for a conventional voltage comparator. Designed and fabricated in a 0.18 μm complementary metal-oxide-semiconductor process on about 3000 μm2 silicon area, the proposed demodulator consumes only 7.5 μA from a magnetically coupled induced power. Operating with a 13.56 MHz carrier frequency, the circuit supports modulation indices from 7 up to 100%. The demodulator may as well be used... 

    Numerical investigation of the heat transfer of a ferrofluid inside a tube in the presence of a non-uniform magnetic field

    , Article European Physical Journal Plus ; Volume 132, Issue 2 , 2017 ; 21905444 (ISSN) Hariri, S ; Mokhtari, M ; Barzegar Gerdroodbary, M ; Fallah, K ; Sharif University of Technology
    Springer Verlag  2017
    Abstract
    In this article, a three-dimensional numerical investigation is performed to study the effect of a magnetic field on a ferrofluid inside a tube. This study comprehensively analyzes the influence of a non-uniform magnetic field in the heat transfer of a tube while a ferrofluid (water with 0.86 vol% nanoparticles (Fe3O4) is let flow. The SIMPLEC algorithm is used for obtaining the flow and heat transfer inside the tube. The influence of various parameters, such as concentration of nanoparticles, intensity of the magnetic field, wire distance and Reynolds number, on the heat transfer is investigated. According to the obtained results, the presence of a non-uniform magnetic field significantly... 

    Influence of the angle of incident shock wave on mixing of transverse hydrogen micro-jets in supersonic crossflow

    , Article International Journal of Hydrogen Energy ; Volume 40, Issue 30 , August , 2015 , Pages 9590-9601 ; 03603199 (ISSN) Barzegar Gerdroodbary, M ; Jahanian, O ; Mokhtari, M ; Sharif University of Technology
    Elsevier Ltd  2015
    Abstract
    A three-dimensional numerical study has been performed to investigate the influence of angle of shock waves on sonic transverse Hydrogen micro-jets subjected to a supersonic crossflow. This study focuses on mixing of the Hydrogen jet in a Mach 4.0 crossflow with a global equivalence ratio of 0.5. Flow structure and fuel/air mixing mechanism were investigated numerically. Parametric studies were conducted on the angle of shock wave by using the Reynolds-averaged Navier-Stokes equations with Menter's Shear Stress Transport turbulence model. Complex jet interactions were found in the downstream region with a variety of flow features depending upon the angle of shock incident. These flow...