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    Developing a Heuristic Filter Utilizing Firefly Optimization Algorithm: A Case Study on State Estimation of a Slung Payload from a Quadrotor

    , M.Sc. Thesis Sharif University of Technology Raoufi, Mohsen (Author) ; Nobahari, Hadi (Supervisor)
    Abstract
    The aim of the present thesis is to develop a novel heuristic filter by utilizing Firefly Optimization Algorithm for state estimation of nonlinear, non-Gaussian systems. The proposed filter formulates the estimation problem as a dynamic, stochastic one. The swarm intelligence of the fireflies enables the filter to find and track the best estimation. To estimate the states of a system, the model of the system is required. Hence, an 8-DoF quadrotor with slung payload system, as a case study, is modeled by the tensor method. In this case, as a highly nonlinear system, in order not to rely on extra sensors for monitoring swing-angle, the estimation of payload states is needed. In this regard,... 

    Reactive Crystallization in an Impinging Jets Reactor

    , M.Sc. Thesis Sharif University of Technology Raoufi, Farzan (Author) ; Molaei Dehkordi, Asghar (Supervisor)
    Abstract
    Reactive crystallization or precipitation is an important industrial process. Many chemicals and biochemicals such as catalysts and pigments are produced by precipitation. Because of the advantages of impinging jets in chemical engineering processes, the main aim of this research was to investigate the application of this method in precipitation and to study the effects of different operating and design parameters on the product’s quality and properties. Two chemical models of barium sulfate and copper oxalate were used as main products. Each of these chemicals was produced by a liquid-liquid reaction of two aqueous solutions, which were fed to an impinging-jets reactor. Effects of... 

    Partition Function of Six-vertex Model

    , M.Sc. Thesis Sharif University of Technology Raoufi, Aran (Author) ; Zohuri-Zangeneh, Bijan (Supervisor)
    Abstract
    The six-vertex model is one of the lattice models of two dimensional statistical physics. In this model, like other models in statistical physics, the probability of occurrence of any configuration is proportional to the product of some local weights.The partition function of the model is the sum of products of local weights over all of the allowable configurations. The partition function has important physical interpretations and computing it is regarded as the first step toward the understanding of the model. In this thesis, we give a survey on different methods of calculating the partition functions. The important point is the generality of these methods such as employing Yang-Baxter... 

    An optimal time algorithm for minimum linear arrangement of chord graphs

    , Article Information Sciences ; Volume 238 , 2013 , Pages 212-220 ; 00200255 (ISSN) Raoufi, P ; Rostami, H ; Bagherinezhad, H ; Sharif University of Technology
    2013
    Abstract
    A linear arrangement φ of an undirected graph G = (V, E) with |V| = n nodes is a bijective function φ:V → {0, ..., n - 1}. The cost function is cost(G,φ)=∑uv∈E|(φ(u)-φ(v))| and opt(G) = min∀φcost(G, φ). The problem of finding opt(G) is called minimum linear arrangement (MINLA). The Minimum Linear Arrangement is an NP-hard problem in general. But there are some classes of graphs optimally solvable in polynomial time. In this paper, we show that the label of each node equals to the reverse of binary representation of its id in the optimal arrangement. Then, we design an O(n) algorithm to solve the minimum linear arrangement problem of Chord graphs  

    Piping Dam Breach Physical and Numerical Modelling Evaluation

    , M.Sc. Thesis Sharif University of Technology Seyed Raoufi, Arian (Author) ; Jafarzadeh, Fardin (Supervisor)
    Abstract
    In past few centuries , dams have been always a crucial part of human life . Using dams for agriculture and supplying water for people , has made them a valuable asset for countries . So evaluating dam safety and dam breach properties is so important. This issue is a geotechnical , structural and hydrological matter. Safety of earth dams could be threatened due to dam body breach caused by overtopping or pipping, during heavy floods, strong ground motions or any structural damage or defection. As in previous studies , calculating the final geometrical breach properties and time of failure was the main goal , we tried to connect this characteristics and find the relation of time and breach... 

    Comparison of performance prediction of solar water heaters between artificial neural networks and conventional correlations

    , Article International Journal of Global Energy Issues ; Volume 31, Issue 2 , 2009 , Pages 122-131 ; 09547118 (ISSN) Razavi, J ; Riazi, M. R ; Raoufi, F ; Sadeghi, A ; Sharif University of Technology
    2009
    Abstract
    The aim of this study was to develop a predictive method for heat transfer coefficients in solar water heaters and their performance evaluation of such heaters with different materials used as heat collectors. Two approaches have been used: conventional method and an Artificial Neural Network (ANN) to predict the performance of solar water heaters and to compare these two approaches. This performance is measured in terms of outlet temperature by using a set of conventional feed forward multi-layer neural networks. The actual experimental data which were used as our network's input gathered from published literature (for polypropylene tubes) and from the experiments carried out recently using... 

    Energy of Graphs

    , M.Sc. Thesis Sharif University of Technology Raoufi, Ensiyeh (Author) ; Akbari Feizabadi, Saeed (Supervisor) ; Fahmideh Gholami, Mahdi (Co-Supervisor)
    Abstract
    Energy of graphs first defined by Ivan Gutman in 1978[1]. Let G be a graph with (0,1)-adjacency matrix A and let λ_1≥⋯≥λ_n be eigenvalues of A. Grap h energy is defined as the sum of absolute values of the eigenvalues of A and is shown by ɛ(G). let H_1,…,H_k be the vertex-disjoint induced subgraphs of graph G, it is proved that energy of G is at least equal to the sum of energy of H_i subgraphs, where the summation is over i. Also by partitioning edges of G to L_1,…,L_k subgraphs, energy of G is at most equal to sum of energy of L_i subgraphs , where the summation is over i. In this thesi s we study energy of graphs, specially... 

    Graphene aerogel nanoparticles for in-situ loading/pH sensitive releasing anticancer drugs

    , Article Colloids and Surfaces B: Biointerfaces ; Volume 186 , 2020 Ayazi, H ; Akhavan, O ; Raoufi, M ; Varshochian, R ; Hosseini Motlagh, N. S ; Atyabi, F ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Free polymer graphene aerogel nanoparticles (GA NPs) were synthesized by using reduction/aggregation of graphene oxide (GO) sheets in the presence of vitamin C (as a biocompatible reductant agent) at a low temperature (40 °C), followed by an effective sonication. Synthesis of GA NPs in doxorubicin hydrochloride (DOX)-containing solution results in the simultaneous synthesis and drug loading with higher performance (than that of the separately synthesized and loaded samples). To investigate the mechanism of loading and the capability of GA NPs in the loading of other drug structures, two groups of ionized (DOX, Amikacin sulfate and, D-glucosamine hydrochloride) and non-ionized (Paclitaxel... 

    Cell shape affects nanoparticle uptake and toxicity: An overlooked factor at the nanobio interfaces

    , Article Journal of Colloid and Interface Science ; Volume 531 , 2018 , Pages 245-252 ; 00219797 (ISSN) Farvadi, F ; Ghahremani, M. H ; Hashemi, F ; Hormozi Nezhad, M. R ; Raoufi, M ; Zanganeh, S ; Atyabi, F ; Dinarvand, R ; Mahmoudi, M ; Sharif University of Technology
    Academic Press Inc  2018
    Abstract
    Hypothesis: It is now being increasingly accepted that cells in their native tissue show different morphologies than those grown on a culture plate. Culturing cells on the conventional two-dimensional (2D) culture plates does not closely resemble the in vivo three-dimensional (3D) structure of cells which in turn seems to affect cellular function. This is one of the reasons, among many others, that nanoparticles uptake and toxicology data from 2D culture plates and in vivo environments are not correlated with one another. In this study, we offer a novel platform technology for producing more in vivo-like models of in vitro cell culture. Experiments: The normal fibroblast cells (HU02) were... 

    Bare surface of gold nanoparticle induces inflammation through unfolding of plasma fibrinogen

    , Article Scientific Reports ; Volume 8, Issue 1 , 2018 ; 20452322 (ISSN) Kharazian, B ; Lohse, S. E ; Ghasemi, F ; Raoufi, M ; Saei, A. A ; Hashemi, F ; Farvadi, F ; Alimohamadi, R ; Jalali, S. A ; Shokrgozar, M. A ; Hadipour, N. L ; Ejtehadi, M. R ; Mahmoudi, M ; Sharif University of Technology
    Nature Publishing Group  2018
    Abstract
    The surface of nanoparticles (NPs) get coated by a wide range of biomolecules, upon exposure to biological fluids. It is now being increasingly accepted that NPs with particular physiochemical properties have a capacity to induce conformational changes to proteins and therefore influence their biological fates, we hypothesized that the gold NP’s metal surface may also be involved in the observed Fg unfolding and inflammatory response. To mechanistically test this hypothesis, we probed the interaction of Fg with gold surfaces using molecular dynamic simulation (MD) and revealed that the gold surface has a capacity to induce Fg conformational changes in favor of inflammation response. As the... 

    Sensing of alzheimer's disease and multiple sclerosis using nano-bio interfaces

    , Article Journal of Alzheimer's Disease ; Volume 59, Issue 4 , 2017 , Pages 1187-1202 ; 13872877 (ISSN) Hajipour, M. J ; Ghasemi, F ; Aghaverdi, H ; Raoufi, M ; Linnef, U ; Atyabi, F ; Nabipour, I ; Azhdarzadeh, M ; Derakhshankhah, H ; Lotfabadi, A ; Bargahi, A ; Alekhamis, Z ; Aghaie, A ; Hashemi, E ; Tafakhori, A ; Aghamollaii, V ; Mashhadi, M. M ; Sheibani, S ; Vali, H ; Mahmoudi, M ; Sharif University of Technology
    2017
    Abstract
    It is well understood that patients with different diseases may have a variety of specific proteins (e.g., type, amount, and configuration) in their plasmas. When nanoparticles (NPs) are exposed to these plasmas, the resulting coronas may incorporate some of the disease-specific proteins. Using gold (Au) NPs with different surface properties and corona composition, we have developed a technology for the discrimination and detection of two neurodegenerative diseases, Alzheimer's disease (AD) and multiple sclerosis (MS). Applying a variety of techniques, including UV-visible spectra, colorimetric response analyses and liquid chromatography-tandem mass spectrometry, we found the corona-NP... 

    Molecular interaction of fibrinogen with zeolite nanoparticles

    , Article Scientific Reports ; Volume 9, Issue 1 , 2019 ; 20452322 (ISSN) Derakhshankhah, H ; Hosseini, A ; Taghavi, F ; Jafari, S ; Lotfabadi, A ; Ejtehadi, M. R ; Shahbazi, S ; Fattahi, A ; Ghasemi, A ; Barzegari, E ; Evini, M ; Saboury, A. A ; Shahri, S. M. K ; Ghaemi, B ; Ng, E. P ; Awala, H ; Omrani, F ; Nabipour, I ; Raoufi, M ; Dinarvand, R ; shahpasand, K ; Mintova, S ; Hajipour, M. J ; Mahmoudi, M ; Sharif University of Technology
    Nature Publishing Group  2019
    Abstract
    Fibrinogen is one of the key proteins that participate in the protein corona composition of many types of nanoparticles (NPs), and its conformational changes are crucial for activation of immune systems. Recently, we demonstrated that the fibrinogen highly contributed in the protein corona composition at the surface of zeolite nanoparticles. Therefore, understanding the interaction of fibrinogen with zeolite nanoparticles in more details could shed light of their safe applications in medicine. Thus, we probed the molecular interactions between fibrinogen and zeolite nanoparticles using both experimental and simulation approaches. The results indicated that fibrinogen has a strong and...