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    Finding maximum edge bicliques in convex bipartite graphs

    , Article Algorithmica ; Volume 64, Issue 2 , October , 2012 , Pages 311-325 ; 01784617 (ISSN) Nussbaum, D ; Pu, S ; Sack, J. R ; Uno, T ; Zarrabi Zadeh, H ; Sharif University of Technology
    Springer  2012
    Abstract
    A bipartite graph G = (A,B,E) is convex on B if there exists an ordering of the vertices of B such that for any vertex v ? A, vertices adjacent to v are consecutive in B. A complete bipartite subgraph of a graph G is called a biclique of G. Motivated by an application to analyzing DNA microarray data, we study the problem of finding maximum edge bicliques in convex bipartite graphs. Given a bipartite graph G = (A,B,E) which is convex on B, we present a new algorithm that computes a maximum edge biclique of G in O(nlog3 n log log n) time and O(n) space, where n = |A|. This improves the current O(n 2) time bound available for the problem. We also show that for two special subclasses of convex... 

    On double-star decomposition of graphs

    , Article Discussiones Mathematicae - Graph Theory ; Volume 37, Issue 3 , 2017 , Pages 835-840 ; 12343099 (ISSN) Akbari, S ; Haghi, S ; Maimani, H ; Seify, A ; Sharif University of Technology
    University of Zielona Gora  2017
    Abstract
    A tree containing exactly two non-pendant vertices is called a doublestar. A double-star with degree sequence (k1 +1, k2 +1, 1, ⋯ , 1) is denoted by Sk1,k2 . We study the edge-decomposition of graphs into double-stars. It was proved that every double-star of size k decomposes every 2k-regular graph. In this paper, we extend this result by showing that every graph in which every vertex has degree 2k + 1 or 2k + 2 and containing a 2-factor is decomposed into Sk1,k2 and Sk1-1,k2 , for all positive integers k1 and k2 such that k1 + k2 = k  

    Minimal prime ideals and cycles in annihilating-ideal graphs

    , Article Rocky Mountain Journal of Mathematics ; Volume 43, Issue 5 , 2013 , Pages 1415-1425 ; 00357596 (ISSN) Aalipour, G ; Akbari, S ; Nikandish, R ; Nikmehr, M. J ; Shaveisi, F ; Sharif University of Technology
    2013
    Abstract
    Let R be a commutative ring with identity, and let A(R) be the set of ideals with non-zero annihilator. The annihilating-ideal graph of R is defined as the graph AG(R) with the vertex set A(R)* = A(R) {0}, and two distinct vertices I and J are adjacent if and only if IJ = 0. In this paper, we study some connections between the graph theoretic properties of this graph and some algebraic properties of a commutative ring. We prove that if AG(R) is a tree, then either AG(R) is a star graph or a path of order 4 and, in the latter case, R = F × S, where F is a field and S is a ring with a unique non-trivial ideal. Moreover, we prove that if R has at least three minimal prime ideals, then AG(R) is... 

    On 1-sum flows in undirected graphs

    , Article Electronic Journal of Linear Algebra ; Volume 31, Issue 1 , 2016 , Pages 646-665 ; 10813810 (ISSN) Akbari, S ; Friedland, S ; Markstrom, K ; Zare, S ; Sharif University of Technology
    Abstract
    Let G = (V,E) be a simple undirected graph. For a given set L ⊂ ℝ, a function ω: E → L is called an L-flow. Given a vector γ ∈ ℝv, ω is a γ-L-flow if for each υ ∈ V, the sum of the values on the edges incident to υ is γ(υ). If γ(υ) = c, for all υ ∈ V, then the γ-L-flow is called a c-sum L-flow. In this paper, the existence of γ-L-flows for various choices of sets L of real numbers is studied, with an emphasis on 1-sum flows. Let L be a subset of real numbers containing 0 and denote L*:= L {0}. Answering a question from [S. Akbari, M. Kano, and S. Zare. A generalization of 0-sum flows in graphs. Linear Algebra Appl., 438:3629-3634, 2013.], the bipartite graphs which admit a 1-sum ℝ*-flow or... 

    When a zero-divisor graph is planar or a complete r-partite graph

    , Article Journal of Algebra ; Volume 270, Issue 1 , 2003 , Pages 169-180 ; 00218693 (ISSN) Akbari, S ; Maimani, H. R ; Yassemi, S ; Sharif University of Technology
    Academic Press Inc  2003
    Abstract
    Let Γ(R) be the zero-divisor graph of a commutative ring R. An interesting question was proposed by Anderson, Frazier, Lauve, and Livingston: For which finite commutative rings R is Γ (R) planar? We give an answer to this question. More precisely, we prove that if R is a local ring with at least 33 elements, and Γ(R) ≠ 0, then Γ(R) is not planar. We use the set of the associated primes to find the minimal length of a cycle in Γ(R). Also, we determine the rings whose zero-divisor graphs are complete r-partite graphs and show that for any ring R and prime number p, p ≥ 3, if Γ(R) is a finite complete p-partite graph, then Z(R) = p2, R = p3, and R is isomorphic to exactly one of the rings ℤp3,... 

    Community Detection in Bipartite Networks

    , M.Sc. Thesis Sharif University of Technology Pourghasemi Najafabadi, Ali (Author) ; Hemmatyar, Ali Mohammad Afshin (Supervisor) ; Kavousi, Kaveh (Co-Supervisor)
    Abstract
    In recent decades, a wide range of research has been done on the characteristics of networks in various domains. Community structure is one of the most important properties in networks. However, most community detection methods designed for unipartite networks. Bipartite networks are very important in many different fields because these networks explicitly shows conceptual connections between different types of entities, for example in bioinformatics science, business, social and economic systems. Recently, community detection in bipartite networks has risen attention by the technical community, due to the accessibility of huge bipartite network data from different domains and the spread of... 

    Connectedness of users-items networks and recommender systems

    , Article Applied Mathematics and Computation ; Vol. 243 , 2014 , Pages 578-584 ; ISSN: 00963003 Gharibshah, J ; Jalili, M ; Sharif University of Technology
    Abstract
    Recommender systems have become an important issue in network science. Collaborative filtering and its variants are the most widely used approaches for building recommender systems, which have received great attention in both academia and industry. In this paper, we studied the relationship between recommender systems and connectivity of users-items bipartite network. This results in a novel recommendation algorithm. In our method recommended items are selected based on the eigenvector corresponding to the algebraic connectivity of the graph - the second smallest eigenvalue of the Laplacian matrix. Since recommending an item to a user equals to adding a new link to the users-items bipartite... 

    A generalization of 0-sum flows in graphs

    , Article Linear Algebra and Its Applications ; Volume 438, Issue 9 , 2013 , Pages 3629-3634 ; 00243795 (ISSN) Akbari, S ; Kano, M ; Zare, S ; Sharif University of Technology
    2013
    Abstract
    Let G be a graph and H be an abelian group. For every subset SH a map φ:E(G)→S is called an S-flow. For a given S-flow of G, and every v∈V(G), define s(v)=∑uv∈E(G)φ(uv). Let k∈H. We say that a graph G admits a k-sum S-flow if there is an S-flow such that for each vertex v,s(v)=k. We prove that if G is a connected bipartite graph with two parts X={x1,⋯,xr}, Y={y1,⋯, ys} and c1,⋯,cr,d1,⋯, ds are real numbers, then there is an R-flow such that s( xi)=ci and s(yj)=dj, for 1≤i≤r,1≤j≤s if and only if ∑i=1rci=∑j=1s dj. Also, it is shown that if G is a connected non-bipartite graph and c1,⋯,cn are arbitrary integers, then there is a Z-flow such that s(vi)=ci, for i=1, ⋯,n if and only if the number... 

    Correlation-enabled energy exchange in quantum systems without external driving

    , Article Physical Review A ; Volume 105, Issue 2 , 2022 ; 24699926 (ISSN) Pyhäranta, T ; Alipour, S ; Rezakhani, A. T ; Ala Nissila, T ; Sharif University of Technology
    American Physical Society  2022
    Abstract
    We study the role of correlation in mechanisms of energy exchange between an interacting bipartite quantum system and its environment by decomposing the energy of the system to local and correlation-related contributions. When the system Hamiltonian is time independent, no external work is performed. In this case, energy exchange between the system and its environment occurs only due to the change in the state of the system. We investigate the possibility of a special case where the energy exchange with the environment occurs exclusively due to changes in the correlation between the constituent parts of the bipartite system, while their local energies remain constant. We find sufficient... 

    Path and Cycle Factors in 3-Regular Graphs

    , M.Sc. Thesis Sharif University of Technology Haghparast, Nastaran (Author) ; Akbari, Saeed (Supervisor)
    Abstract
    Given a graph G and a set F of connected graphs, an F-packing of G is a subgraph of G whose components are isomorphic to one member of F. In addition, if H is a subgraph of G, then an H-packing is defined similarly. The maximum F-packing is an F-packing such that it has the maximum number of vertices. If the F-packing F is a spanning subgraph of G, then F is called an F-factor. If each member of F is a path of order at least two (cycle), then an F-factor is called a path (cycle) factor. In this thesis, the focus was on the path factor and cycle factor in 3-regular graphs and these factors were investigated in 2-connected graphs, 3-connected graphs and bipartite graphs. Moreovere special... 

    Path Factors in Graphs

    , M.Sc. Thesis Sharif University of Technology Rabinia Haratbar, Sanaz (Author) ; Akbari, Saeed (Supervisor)
    Abstract
    Let G be a graph. A path factor of a graph G is a family of distinct paths with at least two vertices which forms a partition for the vertices of G. For a family of non-isomorphic graphs, F; an F-packing of G is a subgraph of G such that each of its component is isomorphic to a member of F. An F-packing P of G is called an F-factor if the set of vertices in graph G and P are the same. The F-packing problem is the problem of finding an F-packing having the maximum number of vertices in G. In graph theory packing of the vertices of paths, cycles and stars are interesting subjects . This thesis is devoted to determine the conditions under which graph G has a {Pk}-factor, where by Pk we mean a... 

    Entanglement from dissipative dynamics into overlapping environments

    , Article Physical Review A - Atomic, Molecular, and Optical Physics ; Vol. 90, issue. 6 , Dec , 2014 Mengoni, R ; Memarzadeh, L ; Mancini, S ; Sharif University of Technology
    Abstract
    We consider two ensembles of qubits dissipating into two overlapping environments, that is, with a certain number of qubits in common that dissipate into both environments. We then study the dynamics of bipartite entanglement between the two ensembles by excluding the common qubits. To get analytical solutions for an arbitrary number of qubits we consider initial states with a single excitation and show that the largest amount of entanglement can be created when excitations are initially located among side (noncommon) qubits. Moreover, the stationary entanglement exhibits a monotonic (nonmonotonic) scaling versus the number of common (side) qubits  

    Zero-sum magic labelings and null sets of regular graphs

    , Article Electronic Journal of Combinatorics ; Vol. 21, issue. 2 , May , 2014 ; ISSN: 10778926 Akbari, S ; Rahmati, F ; Zare, S ; Sharif University of Technology
    Abstract
    For every h ∈ ℕ, a graph G with the vertex set V (G) and the edge set E(G) is said to be h-magic if there exists a labeling l: E(G) → ℤh{0} such that the induced vertex labeling s: V (G) → ℤh, defined by s(v) = Puv∈E(G) l(uv) is a constant map. When this constant is zero, we say that G admits a zero-sum h-magic labeling. The null set of a graph G, denoted by N(G), is the set of all natural numbers h ∈ ℕ such that G admits a zero-sum h-magic labeling. In 2012, the null sets of 3-regular graphs were determined. In this paper we show that if G is an r-regular graph, then for even r (r > 2), N(G) = ℕ and for odd r (r ≠ 5), ℕ {2, 4} ⊆ N(G). Moreover, we prove that if r is odd and G is a 2-edge... 

    Identifying Influential Users in Bipartite Networks and it’s Application in Recommender Systems

    , M.Sc. Thesis Sharif University of Technology Taheri, Mohammad (Author) ; Movaghar, Ali (Supervisor)
    Abstract
    With the growth of spreading information across social networks, users face with many options. More specifically, try to find out information is so troublesome in this context.In response to this problem, recommender systems aim at providing suggestions of interest for end-users. Also, we see many social networks in real-life which have the potential to be used in a variety of recommender systems. In the bipartite networks of users and items weighted edges is formed between each user and each item in the training set. On the other hand, developing a recommender system that takes into account the social network of the user improves the accuracy of traditional recommender systems.The purpose... 

    HellRank: a hellinger-based centrality measure for bipartite social networks

    , Article Social Network Analysis and Mining ; Volume 7, Issue 22 , 2017 ; 18695450 (ISSN) Taheri, S. M ; Mahyar, H ; Firouzi, M ; Ghalebi, E ; Grosu, R ; Movaghar, A ; Sharif University of Technology
    Abstract
    Measuring centrality in a social network, especially in bipartite mode, poses many challenges, for example, the requirement of full knowledge of the network topology, and the lack of properly detecting top-kbehavioral representative users. To overcome the above mentioned challenges, we propose HellRank, an accurate centrality measure for identifying central nodes in bipartite social networks. HellRank is based on the Hellinger distance between two nodes on the same side of a bipartite network. We theoretically analyze the impact of this distance on a bipartite network and find upper and lower bounds for it. The computation of the HellRank centrality measure can be distributed, by letting... 

    Observational equivalence in system estimation: contractions in complex networks

    , Article IEEE Transactions on Network Science and Engineering ; 2017 ; 23274697 (ISSN) Doostmohammadian, M ; Rabiee, H. R ; Zarrabi, H ; Khan, U ; Sharif University of Technology
    Abstract
    Observability of complex systems/networks is the focus of this paper, which is shown to be closely related to the concept of contraction. Indeed, for observable network tracking it is necessary/sufficient to have one node in each contraction measured. Therefore, nodes in a contraction are equivalent to recover for loss of observability, implying that contraction size is a key factor for observability recovery. Here, developing a polynomial order contraction detection algorithm, we analyze the distribution of contractions, studying its relation with key network properties. Our results show that contraction size is related to network clustering coefficient and degree heterogeneity.... 

    On the signed edge domination number of graphs

    , Article Discrete Mathematics ; Volume 309, Issue 3 , 2009 , Pages 587-594 ; 0012365X (ISSN) Akbari, S ; Bolouki, S ; Hatami, P ; Siami, M ; Sharif University of Technology
    2009
    Abstract
    Let γs′ (G) be the signed edge domination number of G. In 2006, Xu conjectured that: for any 2-connected graph G of order n (n ≥ 2), γs′ (G) ≥ 1. In this article we show that this conjecture is not true. More precisely, we show that for any positive integer m, there exists an m-connected graph G such that γs′ (G) ≤ - frac(m, 6) | V (G) |. Also for every two natural numbers m and n, we determine γs′ (Km, n), where Km, n is the complete bipartite graph with part sizes m and n. © 2008 Elsevier B.V. All rights reserved  

    Detecting Community Structures in Patients with Peripheral Nervous System Disorders

    , M.Sc. Thesis Sharif University of Technology Hosseinioun, Morteza (Author) ; Hemmatyar, Ali Mohammad Afshin (Supervisor) ; Movaghar, Ali (Supervisor)
    Abstract
    Nowadays, many biological systems are modeled by bipartite networks. So, using network's concepts and techniques such as community detection may lead us to more accurate outcomes.In this thesis, we have presented an algorithm for detection of communities in a network of patients with Peripheral Nervous System (PNS) issues. The bipartite network of the patients is formed based on the dataset which is collected with cooperation of a Spinal Specialty Clinic. In our algorithm, called MRComSim, three different methods are used to project the bipartite graph to unipartite graph. Then the projected unipartite graph of each method is used for community detection. The output result of our algorithm... 

    Distillation of free entanglement from bound entangled states using weak measurements

    , Article Physical Review A - Atomic, Molecular, and Optical Physics ; Volume 88, Issue 6 , 2013 ; ISSN: 10502947 Baghbanzadeh, S ; Rezakhani, A. T ; Sharif University of Technology
    2013
    Abstract
    We propose a scheme for distillation of free bipartite entanglement from bipartite bound entangled states. The crucial element of our scheme is an ancillary system that is coupled to the initial bound entangled state via appropriate weak measurements. We show that in this protocol free entanglement can be always generated with nonzero probability by using a single copy of the bound entangled state. We also derive a lower bound on the entanglement cost of the protocol and conclude that, on average, applying weaker measurements results in relatively higher values of free entanglement as well as lower costs  

    Commutativity of the adjacency matrices of graphs

    , Article Discrete Mathematics ; Volume 309, Issue 3 , 2009 , Pages 595-600 ; 0012365X (ISSN) Akbari, S ; Moazami, F ; Mohammadian, A ; Sharif University of Technology
    2009
    Abstract
    We say that two graphs G1 and G2 with the same vertex set commute if their adjacency matrices commute. In this paper, we find all integers n such that the complete bipartite graph Kn, n is decomposable into commuting perfect matchings or commuting Hamilton cycles. We show that there are at most n - 1 linearly independent commuting adjacency matrices of size n; and if this bound occurs, then there exists a Hadamard matrix of order n. Finally, we determine the centralizers of some families of graphs. © 2008 Elsevier B.V. All rights reserved