Sharif Digital Repository

Lipoproteins are biochemical compounds containing both proteins and lipids. These particles carry chemicals like cholesterol and triglycerides that are not soluble in aqueous solutions. This paper presents modeling of lipoprotein system using coarse grain molecular dynamics technique and stability analysis of this system in a water solution like blood. A high density lipoprotein (HDL) that consists of two annular monomers is modeled. Also there are lipid bilayers located in center of the rings, so the whole HDL and lipid bilayers are called lipoprotein system. First, all atom model is provided and then coarse-grain model is obtained using MARTINI technique. Modeling of the system in all atom... 

Amyloid beta fibrillation can lead to major disorder of neurons processes and is associated with several neuronal diseases (e.g., Alzheimer's disease). We report here an importance of slight temperature changes, in the physiological range (35-42 °C), on the amyloid fibrillation process in the presence and absence of hydrophilic (silica) and hydrophobic (polystyrene) nanoparticles (NPs). The results highlight the fact that slight increases in temperature can induce inhibitory and acceleratory effects of hydrophobic and hydrophilic NPs on the fibrillation process, respectively. Using further in vivo considerations, the outcomes of this study can be used for considerable modifications on the... 

A novel thermosensitive hydrogel was synthesized by block copolymerization of monomethoxy poly(ethylene glycol) macromere (PEG) onto chitosan backbone, using potassium per sulfate as a free radical initiator. This block copolymer exhibits a thermoreversible transition from an injectable solution at low temperature to a gel at body temperature. Synthesized copolymers were characterized using FT-IR, 1H NMR, 13C NMR, and DSC techniques. Solubility test was performed to compare water and organo-solubility of chitosan before and after copolymerization. Sol-gel transition behavior was investigated using the vial inversion method and viscosity measurements. The gelation behavior makes the... 

We address the noninvasive temperature estimation from pulse-echo radio frequency signals from standard diagnostic ultrasound imaging equipment. In particular, we investigate the use of a high-resolution spectral estimation method for tracking frequency shifts at two or more harmonic frequencies associated with temperature change. The new approach, employing generalized second-order statistics, is shown to produce superior frequency shift estimates when compared to conventional high-resolution spectral estimation methods Seip and Ebbini (1995). Furthermore, temperature estimates from the new algorithm are compared with results from the more commonly used echo shift method described in Simon... 

Automotive industry frequently needs to test new products, according to different production parameters, in order to determine the actual thermal behavior of bodies before mass production is implemented. Numerical simulation of these processes can reduce the very expensive and time consuming experimental procedures. For the drying and hardening process of the top paint applied in the coating process, the body temperature must be raised according to the paint manufacturer regulations. Consequently, prediction of temperature distribution of the car body during various zones of ovens is very vital in the design and performance analysis of the paint dryers. In this research, a novel... 

The aim of this study is to develop iterative regularization algorithms based on parameter and function estimation techniques to solve two-dimensional/axisymmetric transient inverse heat conduction problems in curvilinear coordinate system. The multiblock method is used for geometric decomposition of the physical domain into regions with patched-overlapped interface grids. The central finite-difference version of the alternating-direction implicit technique together with structured body-fitted grids is implemented for numerical solution of the direct problem and other partial differential equations derived by inverse analysis. The approach of estimating unknown parameters and functions is...