Sharif Digital Repository

Aims: Due to large sized genetic database of population in a given society, researchers face serious problem to analyze genetic data and provide accurate genetic identification. Variation in molecular markers such as SNPs, mtDNAs, STRs and Y-chromosome are utilized for different purposes, including genetic identification. In our country due to natural disasters and imposed war, the use of this technology was considered and according to the requirements, an optimal database was designed that has the capability of analyzing genetic data. Methods: After obtaining individual genetic information, a software was designed for the analysis of genetic information as well as to serve as a common... 

Since their introduction, Cognitive Radio Networks (CRN), as a new solution to the problem of spectrum scarcity, have received great attention from the research society. An important field in database-driven CRN studies is pivoted on their security issues. A critical issue in this context is user’s location privacy, which is potentially under serious threat. The query process by secondary users (SU) from the database is one of the points where the problem rises. In this paper, we propose a Privacy-Preserving Query Process (PPQP), accordingly. This method lets SUs deal in the process of spectrum query without sacrificing their location information. Analytical assessment of PPQP’s privacy... 

Nowadays, a large volume of an organization's sensitive data is stored in databases making them attractive to attackers. The useful information attackers try to obtain in the preliminary steps, is the database structure or schema. One of the popular approaches to infer and extract the schema of a database is to analyze the returned error messages from its DBMS. In this paper, we propose a framework to handle and modify the error messages automatically in order to prevent schema revealing. To this aim, after identifying and introducing an appropriate set of categories of error messages, each error message that is returned from a DBMS is placed in a proper category. According to the policy... 

With increasing use of computers in everyday life, improved communication between machines and human is needed. To make a right communication and understand a humankind face which is made in a graphical environment, implementing the audio and visual projects like lip reading, audio and visual speech recognition and lip making are needed. Lack of a complete audio and visual database for this application in Farsi language made us provide a new complete Farsi database for this project that is called SFAVD. It is a unique audio and visual database which in addition to considering Farsi conceptual and speech structure, it considers influence of speech on lip changes. This database is created for... 

The growth of database application usage requires DataBase Management Systems (DBMS) that are accessible, reliable, and dependable. One approach to handle these requirements is replication mechanism. Replication mechanism can be divided into various categories. Some related works consider two categories for replication mechanisms: heterogeneous and homogenous however majority of them classify them in three groups: physical, trigger-based and log based schema. Log-based replication mechanisms are the most widely used category among DBMS vendors. Adapting such approach for heterogeneous systems is a complex task, because of lack of log understanding in the other end. Semantic technologies... 

Automatic translation of a high-level specification language to an executable implementation would be highly useful in maximizing the benefits of formal methods. We will introduce a set of translation functions to fill the specification-implementation gap in the domain of database applications. Because the mathematical foundation of Z has many properties in common with SQL, a direct mapping from Z to SQL structures can be found. We derive a set of translation functions from Z to SQL for the generation of a database. The proposed methodology results in reducing the expenses and duration of the software development, and also, prevents the errors originated from the manual translation of... 

This paper introduces a large-scale, validated database for Persian called Sharif Emotional Speech Database (ShEMO). The database includes 3000 semi-natural utterances, equivalent to 3 h and 25 min of speech data extracted from online radio plays. The ShEMO covers speech samples of 87 native-Persian speakers for five basic emotions including anger, fear, happiness, sadness and surprise, as well as neutral state. Twelve annotators label the underlying emotional state of utterances and majority voting is used to decide on the final labels. According to the kappa measure, the inter-annotator agreement is 64% which is interpreted as “substantial agreement”. We also present benchmark results... 

This paper introduces a large-scale, validated database for Persian called Sharif Emotional Speech Database (ShEMO). The database includes 3000 semi-natural utterances, equivalent to 3 h and 25 min of speech data extracted from online radio plays. The ShEMO covers speech samples of 87 native-Persian speakers for five basic emotions including anger, fear, happiness, sadness and surprise, as well as neutral state. Twelve annotators label the underlying emotional state of utterances and majority voting is used to decide on the final labels. According to the kappa measure, the inter-annotator agreement is 64% which is interpreted as “substantial agreement”. We also present benchmark results... 

Gelatin-based functional films were prepared by the addition of grapefruit seed extract (GSE, 5 wt% based on gelatin) and various amounts of TiO2 (0.5, 1.0, 3.0, and 5.0 wt% based on gelatin). TiO2 was evenly dispersed in the gelatin film, but the film surface roughness was increased as the concentration of TiO2 increased. The mechanical strength and water contact angle (WCA) of the composite film were the highest, while the water vapor permeability (WVP) was the lowest when 0.5 wt% TiO2 was used. The addition of GSE slightly reduced the UV light transmittance, but the addition of TiO2 almost completely prevented the UV light transmission. The addition of GSE and TiO2 did not significantly... 

Analysis of cancer mutational signatures have been instrumental in identification of responsible endogenous and exogenous molecular processes in cancer. The quantitative approach used to deconvolute mutational signatures is becoming an integral part of cancer research. Therefore, development of a stand-alone tool with a user-friendly interface for analysis of cancer mutational signatures is necessary. In this manuscript we introduce CANCERSIGN, which enables users to identify 3-mer and 5-mer mutational signatures within whole genome, whole exome or pooled samples. Additionally, this tool enables users to perform clustering on tumor samples based on the proportion of mutational signatures in... 

Content base image retrieval is an important research field with many applications. In this paper we presents a new approach for finding similar images to a given query, in a general-purpose image database using content-based image retrieval. Color and texture are used as basic features to describe images. In addition, a binary tree structure is used to describe higher level features of an image. It has been used to keep information about separate segments of the images. The performance of the proposed system has been compared with the SIMPLIcity system using COREL image database. Our experimental results showed that among 10 image categories available in COREL database, our system had a... 

Today, many applications produce and use time series data. The data of this type may contain sensitive information. So they should be protected against unauthorized accesses. In this paper, security issues of time series data are identified and an access and inference control model for satisfying the identified security requirements is proposed. Using this model, administrators can define authorization rules based on various time-based granularities (e.g. day or month) and apply value-based constraints over the accessed times series data. Furthermore, they can define policy rules over the composition of multiple time-series other than the base time-series data. Detecting and resolving... 

An important security challenge in database outsourcing scenarios is the correctness verification of query results. The proposed approaches in the literature, impose high overhead on both the service provider and specially the clients. In this paper, we propose the Trust-Based Fake Tuples approach to audit the correctness of query results. In this approach, some fake tuples are included among the real ones in order to verify the correctness of the results. The experience learnt from past results is used in this paper to evaluate the trust toward the service provider. This trust value is used to tune the number of fake tuples and subsequently the imposed overhead. As the trust value toward... 

Identifying and measuring the impact and value of scientific output plays an important role in today's world of information overload. On one side, governments are trying to distribute research funds in ways that support research in strategically important fields, on the other side, researchers and scientists are seeking to access only relevant and quality information that have mainly worthy of their attention. Nowadays, countries are evaluated not only by their national products, military power, geographical area, etc., but also by such factors as the production and consumption of scientific information. Scientometric approaches are used to provide appropriate tools for evaluating scientific... 

In this study, we are proposing a novel nonlinear classification approach to discriminate between Alzheimer's Disease (AD) and a control group using T1-weighted and T2-weighted Magnetic Resonance Images (MRI's) of brain. Since T1-weighted images and T2-weighted images have inherent physical differences, obviously each of them has its own particular medical data and hence, we extracted some specific features from each. Then the variations of the relevant eigenvalues of the extracted features were tracked to pick up the most informative ones. The final features were assigned to two parallel systems to be nonlinearly categorized. Considering the fact that AD defects the white and gray regions... 

Nowadays, due to the growing role that analytical, predictive and decision making activities perform in organizations, organizational data are very important. In order to utilizing organizational data, it should be transmitted from the operational and transactional environment to a dimensional or normal database. However, not only differences in platforms and data types are some issues that should be overcome, but also variety of data types such as non-structural and text format files should be considered. In this way, exploiting updated data storages is necessary for quick and accurate services and raising customers' satisfaction. Although real time data storages are frequently used in...