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    Recent progress in molecular simulation of nanoporous graphene membranes for gas separation

    , Article Journal of the Korean Physical Society ; Volume 71, Issue 1 , 2017 , Pages 54-62 ; 03744884 (ISSN) Fatemi, S. M ; Baniasadi, A ; Moradi, M ; Sharif University of Technology
    Abstract
    If an ideal membrane for gas separation is to be obtained, the following three characteristics should be considered: the membrane should be as thin as possible, be mechanically robust, and have welldefined pore sizes. These features will maximize its solvent flux, preserve it from fracture, and guarantee its selectivity. Graphene is made up of a hexagonal honeycomb lattice of carbon atoms with sp2 hybridization state forming a one-atom-thick sheet of graphite. Following conversion of the honeycomb lattices into nanopores with a specific geometry and size, a nanoporous graphene membrane that offers high efficiency as a separation membrane because of the ultrafast molecular permeation rate as... 

    Designing a new multifunctional peptide for metal chelation and Aβ inhibition

    , Article Archives of Biochemistry and Biophysics ; Volume 653 , 2018 , Pages 1-9 ; 00039861 (ISSN) Shamloo, A ; Asadbegi, M ; Khandan, V ; Amanzadi, A ; Sharif University of Technology
    Academic Press Inc  2018
    Abstract
    According to the Amyloid hypothesis, as the foremost scientific explanation for Alzheimer Disease (AD), the neuropathology of AD is related to toxic fragments of amyloid beta (Aβ) protein. Based on this hypothesis, an attractive therapeutic approach was demonstrated to identify multifunctional peptides able to modulate Aβ pathologies as the source of AD. On this premise, a bifunctional polypeptide based on the iAβ5p lead compound, was designed to inhibit Aβ aggregation and free metal ions. Herein, the efficacy of this novel drug in Zn2+ and Cd2+ ion chelation was examined through an integrated technique comprising combined Docking, QM, and MD simulations. MD relaxation of a set of probable... 

    Properties of Nafion Under Uniaxial Loading at Different Temperatures: A Molecular Dynamics Study

    , Article Polymer - Plastics Technology and Engineering ; Volume 54, Issue 8 , 2015 , Pages 806-813 ; 03602559 (ISSN) Ozmaian, M ; Naghdabadi, R ; Sharif University of Technology
    Taylor and Francis Inc  2015
    Abstract
    Nafion membrane encounters many different thermal conditions and mechanical loadings because of its wide range of applications as a proton exchange membrane (PEM). Molecular dynamics simulation of hydrated Nafion at different temperatures is carried out to investigate the alteration of the physical properties of Nafion under uniaxial loading over a wide range of temperatures. According to the simulation results, increase of the temperature reduces the yield stress. The results also show that the polymer chains ordering increases the glass transition temperature and enhances the self-diffusion coefficient of water in hydrated Nafion. Comparisons show that the elastic modulus and viscosity... 

    Vibrational analysis of Ag, Cu and Ni nanobeams using a hybrid continuum-atomistic model

    , Article International Journal of Mechanical Sciences ; Volume 165 , 2020 Ghafouri Pourkermani, A ; Azizi, B ; Nejat Pishkenari, H ; Sharif University of Technology
    Elsevier Ltd  2020
    Abstract
    An important issue in the study of the nanostructures behaviors is the surface effects, which increases with the increase of the surface-to-volume ratio. Continuum theories are capable of modeling structures at micro and larger scales with enough precision and low computational costs. However, these theories are unable to predict the mechanical properties of nanostructures accurately. On the other hand, due to their high precision, atomistic modeling techniques are extensively employed for the study of systems at nanoscale; however, computational costs of these techniques are relatively high. In this research, we aim to study the vibrational behavior of nanobeams made of three FCC metals;... 

    A novel model for analysis of multilayer graphene sheets taking into account the interlayer shear effect

    , Article Meccanica ; Volume 53, Issue 11-12 , 2018 , Pages 3061-3082 ; 00256455 (ISSN) Nikfar, M ; Asghari, M ; Sharif University of Technology
    Springer Netherlands  2018
    Abstract
    In this study, a multiplate shear model is developed for dynamic analysis of multilayer graphene sheets with arbitrary shapes considering the interlayer shear effect. By utilizing the model, then some free-vibration analysis is presented. According to the experimental results, the weak interlayer van der Waals interaction cannot maintain the integrity of carbon atoms in adjacent layers. Therefore, it is required that the interlayer shear effect is accounted to study multilayer graphene mechanical behavior. The governing differential equation of motion is derived for the multilayer graphene sheets utilizing a variational approach based on the Kirchhoff plate model. The essential and natural... 

    Mass transfer through PDMS/zeolite 4A MMMs for hydrogen separation: Molecular dynamics and grand canonical Monte Carlo simulations

    , Article International Communications in Heat and Mass Transfer ; Volume 108 , 2019 ; 07351933 (ISSN) Riasat Harami, H ; Amirkhani, F ; Khadem, S. A ; Rezakazemi, M ; Asghari, M ; Shirazian, S ; Sharif University of Technology
    Elsevier Ltd  2019
    Abstract
    In industry, utilizing membrane separation technology to purify natural gas streams is of remarkable significance. Molecular Simulation was used in the current article to study the structural and gas separation properties of polydimethylsiloxane (PDMS)/zeolite 4A Mixed Matrix Membranes (MMMs). To explore the optimal performance of MMMs, several structural analyses, namely Fractional Free Volume (FFV), Radial Distribution Function (RDF), X-Ray Diffraction (XRD) and also Glass Transition Temperature (Tg) as one of the most important properties of membranes have been evaluated. Also, the solubilities and diffusivities of periodic cells were respectively measured using MSD and adsorption...