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    Developing a structural-based local learning rule for classification tasks using ionic liquid space-based reservoir

    , Article Neural Computing and Applications ; Volume 34, Issue 17 , 2022 , Pages 15075-15093 ; 09410643 (ISSN) Iranmehr, E ; Shouraki, S. B ; Faraji, M ; Sharif University of Technology
    Springer Science and Business Media Deutschland GmbH  2022
    Abstract
    Coming up with a model which matches biological observations more closely has always been one of the main challenges in the field of artificial neural networks. Lately, an ionic model of reservoir networks containing spiking neurons (ILS-based reservoir network) has been proposed which seems to replicate some of the biological processes we have observed up until now. This paper presents a local learning rule for the ILS-based reservoir inspired by the biological fact that each incoming stimulus causes the formation of new dendritic spines, producing new synapses. This property may result in a higher degree of neuroplasticity, leading to a higher learning capacity. To evaluate the proposed... 

    Encrypted internet traffic classification using a supervised spiking neural network

    , Article Neurocomputing ; Volume 503 , 2022 , Pages 272-282 ; 09252312 (ISSN) Rasteh, A ; Delpech, F ; Aguilar Melchor, C ; Zimmer, R ; Shouraki, S. B ; Masquelier, T ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    Internet traffic recognition is essential for access providers since it helps them define adapted priorities in order to enhance user experience, e.g., a high priority for an audio conference and a low priority for a file transfer. As internet traffic becomes increasingly encrypted, the main classic traffic recognition technique, payload inspection, is rendered ineffective. Hence this paper uses machine learning techniques looking only at packet size and time of arrival. For the first time, Spiking neural networks (SNNs), which are inspired by biological neurons, were used for this task for two reasons. Firstly, they can recognize time-related data packet features. Secondly, they can be... 

    A new scheme for the development of IMU-based activity recognition systems for telerehabilitation

    , Article Medical Engineering and Physics ; Volume 108 , 2022 ; 13504533 (ISSN) Nasrabadi, A. M ; Eslaminia, A. R ; Bakhshayesh, P. R ; Ejtehadi, M ; Alibiglou, L ; Behzadipour, S ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    Wearable human activity recognition systems (HAR) using inertial measurement units (IMU) play a key role in the development of smart rehabilitation systems. Training of a HAR system with patient data is costly, time-consuming, and difficult for the patients. This study proposes a new scheme for the optimal design of HARs with minimal involvement of the patients. It uses healthy subject data for optimal design for a set of activities used in the rehabilitation of PD1 patients. It maintains its performance for individual PD subjects using a single session data collection and an adaptation procedure. In the optimal design, several classifiers (i.e. NM, k-NN, MLP with RBF as a hidden layer, and... 

    Convolutional neural networks for estimating the ripening state of fuji apples using visible and near-infrared spectroscopy

    , Article Food and Bioprocess Technology ; Volume 15, Issue 10 , 2022 , Pages 2226-2236 ; 19355130 (ISSN) Benmouna, B ; García Mateos, G ; Sabzi, S ; Fernandez Beltran, R ; Parras-Burgos, D ; Molina Martínez, J. M ; Sharif University of Technology
    Springer  2022
    Abstract
    The quality of fresh apple fruits is a major concern for consumers and manufacturers. Classification of these fruits according to their ripening stage is one of the most decisive factors in determining their quality. In this regard, the aim of this work is to develop a new method for non-destructive classification of the ripening state of Fuji apples using hyperspectral information in the visible and near-infrared (Vis/NIR) regions. Spectra of 172 apple samples in the range from 450 to 1000 nm were studied, which were selected from four different ripening stages. A convolutional neural network (CNN) model was proposed to perform the classification of the samples. The proposed method was... 

    Recent advances in aqueous virus removal technologies

    , Article Chemosphere ; Volume 305 , 2022 ; 00456535 (ISSN) Al-Hazmi, H. E ; Shokrani, H ; Shokrani, A ; Jabbour, K ; Abida, O ; Mousavi Khadem, S. S ; Habibzadeh, S ; Sonawane, S. H ; Saeb, M. R ; Bonilla-Petriciolet, A ; Badawi, M ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    The COVID-19 outbreak has triggered a massive research, but still urgent detection and treatment of this virus seems a public concern. The spread of viruses in aqueous environments underlined efficient virus treatment processes as a hot challenge. This review critically and comprehensively enables identifying and classifying advanced biochemical, membrane-based and disinfection processes for effective treatment of virus-contaminated water and wastewater. Understanding the functions of individual and combined/multi-stage processes in terms of manufacturing and economical parameters makes this contribution a different story from available review papers. Moreover, this review discusses... 

    A new supply chain distribution network design for two classes of customers using transfer recurrent neural network

    , Article International Journal of System Assurance Engineering and Management ; Volume 13, Issue 5 , 2022 , Pages 2604-2618 ; 09756809 (ISSN) Najjartabar Bisheh, M ; Nasiri, G. R ; Esmaeili, E ; Davoudpour, H ; Chang, S. I ; Sharif University of Technology
    Springer  2022
    Abstract
    Supply chain management integrates planning and controlling of materials, information, and finances in a process which begins from suppliers and ends with customers. Optimal planning decisions made in such a distribution network usually include transportation, facilities location, and inventory. This study presents a new approach for considering customers’ differentiation in an integrated location-allocation and inventory control model using transfer recurrent neural network (RNN). In this study, a location and allocation problem is integrated with inventory control decisions considering two classes of strategic and non-strategic customers. For the first time, a novel transfer RNN is applied... 

    TripletProt: Deep Representation Learning of Proteins Based On Siamese Networks

    , Article IEEE/ACM Transactions on Computational Biology and Bioinformatics ; Volume 19, Issue 6 , 2022 , Pages 3744-3753 ; 15455963 (ISSN) Nourani, E ; Asgari, E ; McHardy, A. C ; Mofrad, M. R. K ; Sharif University of Technology
    Institute of Electrical and Electronics Engineers Inc  2022
    Abstract
    Pretrained representations have recently gained attention in various machine learning applications. Nonetheless, the high computational costs associated with training these models have motivated alternative approaches for representation learning. Herein we introduce TripletProt, a new approach for protein representation learning based on the Siamese neural networks. Representation learning of biological entities which capture essential features can alleviate many of the challenges associated with supervised learning in bioinformatics. The most important distinction of our proposed method is relying on the protein-protein interaction (PPI) network. The computational cost of the generated... 

    A hierarchical machine learning model based on Glioblastoma patients' clinical, biomedical, and image data to analyze their treatment plans

    , Article Computers in Biology and Medicine ; Volume 150 , 2022 ; 00104825 (ISSN) Ershadi, M. M ; Rahimi Rise, Z ; Akhavan Niaki, S. T ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    Aim of study: Glioblastoma Multiforme (GBM) is an aggressive brain cancer in adults that kills most patients in the first year due to ineffective treatment. Different clinical, biomedical, and image data features are needed to analyze GBM, increasing complexities. Besides, they lead to weak performances for machine learning models due to ignoring physicians' knowledge. Therefore, this paper proposes a hierarchical model based on Fuzzy C-mean (FCM) clustering, Wrapper feature selection, and twelve classifiers to analyze treatment plans. Methodology/Approach: The proposed method finds the effectiveness of previous and current treatment plans, hierarchically determining the best decision for... 

    Vis-NIR hyperspectral imaging coupled with independent component analysis for saffron authentication

    , Article Food Chemistry ; Volume 393 , 2022 ; 03088146 (ISSN) Hashemi Nasab, F. S ; Parastar, H ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    In the present contribution, visible-near infrared hyperspectral imaging (Vis-NIR-HSI) combined with a novel chemometric approach based on mean-filed independent component analysis (MF-ICA) followed by multivariate classification techniques is proposed for saffron authentication and adulteration detection. First, MF-ICA was used to exploit pure spatial and spectral profiles of the components. Then, principal component analysis (PCA) and hierarchical cluster analysis (HCA) were used to find patterns of authentic samples based on their distribution maps. Then, detection of five common plant-derived adulterants of saffron including safflower, saffron style, calendula, rubia and turmeric were... 

    Global mortality of snakebite envenoming between 1990 and 2019

    , Article Nature Communications ; Volume 13, Issue 1 , 2022 ; 20411723 (ISSN) Roberts, N. L. S ; Johnson, E. K ; Zeng, S. M ; Hamilton, E. B ; Abdoli, A ; Alahdab, F ; Alipour, V ; Ancuceanu, R ; Andrei, C. L ; Anvari, D ; Arabloo, J ; Ausloos, M ; Awedew, A. F ; Badiye, A. D ; Bakkannavar, S. M ; Bhalla, A ; Bhardwaj, N ; Bhardwaj, P ; Bhaumik, S ; Bijani, A ; Boloor, A ; Cai, T ; Carvalho, F ; Chu, D.-T ; Couto, R. A. S ; Dai, X ; Desta, A. A ; Do, H. T ; Earl, L ; Eftekhari, A ; Esmaeilzadeh, F ; Farzadfar, F ; Fernandes, E ; Filip, I ; Foroutan, M ; Franklin, R. C ; Gaidhane, A. M ; Gebregiorgis, B. G ; Gebremichael, B ; Ghashghaee, A ; Golechha, M ; Hamidi, S ; Haque, S. E ; Hayat, K ; Herteliu, C ; Ilesanmi, O. S ; Islam, M. M ; Jagnoor, J ; Kanchan, T ; Kapoor, N ; Khan, E. A ; Khatib, M. N ; Khundkar, R ; Krishan, K ; Kumar, G. A ; Kumar, N ; Landires, I ; Lim, S. S ; Madadin, M ; Maled, V ; Manafi, N ; Marczak, L. B ; Menezes, R. G ; Meretoja, T. J ; Miller, T. R ; Mohammadian Hafshejani, A ; Mokdad, A. H ; Monteiro, F. N. P ; Moradi, M ; Nayak, V. C ; Nguyen, C. T ; Nguyen, H. L.T ; Nuñez-Samudio, V ; Ostroff, S. M ; Padubidri, J. R ; Pham, H. Q ; Pinheiro, M ; Pirestani, M ; Quazi Syed, Z ; Rabiee, N ; Radfar, A ; Rahimi Movaghar, V ; Rao, S. J ; Rastogi, P ; Rawaf, D. L ; Rawaf, S ; Reiner, R.C., Jr ; Sahebkar, A ; Samy, A. M ; Sawhney, M ; Schwebel, D. C ; Senthilkumaran, S ; Shaikh, M. A ; Skryabin, V. Y ; Skryabina, A. A ; Soheili, A ; Stokes, M. A ; Thapar, R ; Tovani Palone, M. R ; Tran, B. X ; Travillian, R. S ; Velazquez, D. Z ; Zhang, Z. J ; Naghavi, M ; Dandona, R ; Dandona, L ; James, S. L ; Pigott, D.M ; Murray, C. J. L ; Hay, S. I ; Vos, T ; Sharif University of Technology
    Nature Research  2022
    Abstract
    Snakebite envenoming is an important cause of preventable death. The World Health Organization (WHO) set a goal to halve snakebite mortality by 2030. We used verbal autopsy and vital registration data to model the proportion of venomous animal deaths due to snakes by location, age, year, and sex, and applied these proportions to venomous animal contact mortality estimates from the Global Burden of Disease 2019 study. In 2019, 63,400 people (95% uncertainty interval 38,900–78,600) died globally from snakebites, which was equal to an age-standardized mortality rate (ASMR) of 0.8 deaths (0.5–1.0) per 100,000 and represents a 36% (2–49) decrease in ASMR since 1990. India had the greatest number... 

    Evaluation of FT-IR spectroscopy combined with SIMCA and PLS‑DA for detection of adulterants in pistachio butter

    , Article Infrared Physics and Technology ; Volume 127 , 2022 ; 13504495 (ISSN) Khanban, F ; Bagheri Garmarudi, A ; Parastar, H ; Toth, G ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    This work scrutinized the adulteration of pistachio butter with three potential edible oils using Fourier transform infrared spectroscopy (FT-IR) and multivariate classification methods. Each of the classes, including non-adulterated samples and adulterated samples consisting of pistachio butter mixed with various concentrations of peanut oil, corn oil and sunflower oil, were classified. For this purpose, multivariate methods, including soft independent modeling of class analogy (SIMCA) and partial least squares discriminant analysis (PLS-DA), were applied to classify the FTIR data. After evaluating the model on unknown samples, the results indicated that PLS-DA was better than the SIMCA... 

    BIM and machine learning in seismic damage prediction for non-structural exterior infill walls

    , Article Automation in Construction ; Volume 139 , 2022 ; 09265805 (ISSN) Mousavi, M ; TohidiFar, A ; Alvanchi, A ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    Despite the seismic vulnerability of non-structural Exterior Infill Walls (EIWs), their resilient design has received minimal attention. This study addresses the issue by proposing a novel framework for predicting possible damage states of EIWs. The framework benefits from an automated combination of Building Information Modeling as a visualized 3D database of the building's components and the Machine Learning classification as the prediction engine. The framework's applicability is studied in a Proof of Concept example of the exterior walls of the buildings damaged in the 2017 earthquake in Kermanshah, Iran. The Extremely Randomized Trees classifier produced the best results for predicting... 

    A review on competitive pricing in supply chain management problems: models, classification, and applications

    , Article International Transactions in Operational Research ; Volume 29, Issue 4 , 2022 , Pages 2082-2115 ; 09696016 (ISSN) Ziari, M ; Ghomi Avili, M ; Pishvaee, M. S ; Jahani, H ; Sharif University of Technology
    John Wiley and Sons Inc  2022
    Abstract
    Supply chain management (SCM) deals with various strategic, tactical, and operational level decisions in which pricing is of utmost importance to decision makers. Most of the real-life supply chain pricing problems consider competition as a crucial factor in order to expand the market share and tackle emerging competitors. Accordingly, competitive pricing in SCM has attracted great attention by practitioners and academicians in the last four decades. Now after 40 years, it seems necessary to systematically review and classify the previous studies and present the most appealing future research directions. This paper provides a comprehensive review of the state-of-the-art published papers in... 

    Accurate modulation classification under impaired wireless channels via shallow convolutional neural networks

    , Article Physical Communication ; Volume 53 , 2022 ; 18744907 (ISSN) Ahangarzadeh, A ; Hashemi, M ; Nezamalhosseini, S. A ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    Classifying the modulation type of radio signals plays an important role in current and future wireless communication systems. We present a modulation classification method based on convolutional neural networks that reaches high accuracy in face of various channel characteristics and signal conditions without requiring the network to have a very large depth. Experiment results show that the proposed method reaches accurate classification under different system impairment settings that include sampling rate offset, carrier frequency offset, multi-path fading, and additive white Gaussian noise. For instance, compared to a state-of-the-art method, accuracy is improved up to 25% in classifying... 

    High-Speed multi-layer convolutional neural network based on free-space optics

    , Article IEEE Photonics Journal ; Volume 14, Issue 4 , 2022 ; 19430655 (ISSN) Sadeghzadeh, H ; Koohi, S ; Sharif University of Technology
    Institute of Electrical and Electronics Engineers Inc  2022
    Abstract
    Convolutional neural networks (CNNs) are at the heart of several machine learning applications, while they suffer from computational complexity due to their large number of parameters and operations. Recently, all-optical implementation of the CNNs has achieved many attentions, however, the recently proposed optical architectures for CNNs cannot fully utilize the tremendous capabilities of optical processing, due to the required electro-optical conversions in-between successive layers. To implement an all-optical multi-layer CNN, it is essential to optically implement all required operations, namely convolution, summation of channels' output for each convolutional kernel feeding the... 

    Data-driven damage assessment of reinforced concrete shear walls using visual features of damage

    , Article Journal of Building Engineering ; Volume 53 , 2022 ; 23527102 (ISSN) Mansourdehghan, S ; Dolatshahi, K. M ; Asjodi, A. H ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    This paper proposes a damage assessment framework based on the visual features of a damaged reinforced concrete shear wall, such as crack pattern distribution, crushing areal density, aspect ratio, and the presence of the boundary condition. The study contains two parts including: identifying the performance level of the damaged walls (i.e., Immediate Occupancy, Life Safety, and Collapse Prevention) and estimating the residual strength and drift ratio of the walls. The research database contains 236 images of 72 reinforced concrete shear walls tested in the laboratory under the quasi-static cyclic loadings at various drift ratios between 0 and 4%. To identify the performance level of a... 

    Virtual reservoir computer using an optical resonator

    , Article Optical Materials Express ; Volume 12, Issue 3 , 2022 , Pages 1140-1153 ; 21593930 (ISSN) Boshgazi, S ; Jabbari, A ; Mehrany, K ; Memarian, M ; Sharif University of Technology
    The Optical Society  2022
    Abstract
    Reservoir computing is a machine learning approach that enables us to use recurrent neural networks without involving the complexity of training algorithms and make hardware implementation possible. We present a novel photonic architecture of a reservoir computer that employs a nonlinear node and a resonator to implement a virtual recurrent neural network. This resonator behaves as an echo generator component that substitutes the delay line in delaybased reservoir computers available in the literature. The virtual neural network formed in our implementation is fundamentally different from the delay-based reservoir computers. Different virtual architectures based on the FSR and the Finesse of... 

    Predicting the objective and priority of issue reports in software repositories

    , Article Empirical Software Engineering ; Volume 27, Issue 2 , 2022 ; 13823256 (ISSN) Izadi, M ; Akbari, K ; Heydarnoori, A ; Sharif University of Technology
    Springer  2022
    Abstract
    Software repositories such as GitHub host a large number of software entities. Developers collaboratively discuss, implement, use, and share these entities. Proper documentation plays an important role in successful software management and maintenance. Users exploit Issue Tracking Systems, a facility of software repositories, to keep track of issue reports, to manage the workload and processes, and finally, to document the highlight of their team’s effort. An issue report is a rich source of collaboratively-curated software knowledge, and can contain a reported problem, a request for new features, or merely a question about the software product. As the number of these issues increases, it... 

    Significant pathological voice discrimination by computing posterior distribution of balanced accuracy

    , Article Biomedical Signal Processing and Control ; Volume 73 , 2022 ; 17468094 (ISSN) Pakravan, M ; Jahed, M ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    The ability to speak lucidly plays a key role in social relations. Consequently, the role of the larynx is quite important, and timely diagnosis of laryngeal diseases has proved to be crucial. In this study, a simple computational model for inverse of speech production model is employed to extract the glottal waveform using speech signal. This waveform has useful information about vocal folds performance in terms of providing evidence for distinguishing pathological disorders. Furthermore, obtaining the significance of classification results is important, because it leads to reliable inferences. This study utilizes the sustained vowel sound /a/ and a well-referenced database, namely MEEI. In... 

    ChOracle: A unified statistical framework for churn prediction

    , Article IEEE Transactions on Knowledge and Data Engineering ; Volume 34, Issue 4 , 2022 , Pages 1656-1666 ; 10414347 (ISSN) Khodadadi, A ; Hosseini, S. A ; Pajouheshgar, E ; Mansouri, F ; Rabiee, H. R ; Sharif University of Technology
    IEEE Computer Society  2022
    Abstract
    User churn is an important issue in online services that threatens the health and profitability of services. Most of the previous works on churn prediction convert the problem into a binary classification task where the users are labeled as churned and non-churned. More recently, some works have tried to convert the user churn prediction problem into the prediction of user return time. In this approach which is more realistic in real world online services, at each time-step the model predicts the user return time instead of predicting a churn label. However, the previous works in this category suffer from lack of generality and require high computational complexity. In this paper, we...