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    The Differential Diagnosis of Crohn's Disease and Celiac Disease Using Nuclear Magnetic Resonance Spectroscopy

    , Article Applied Magnetic Resonance ; Volume 45, Issue 5 , May , 2014 , Pages 451-459 Fathi, F ; Kasmaee, L. M ; Sohrabzadeh, K ; Nejad, M. R ; Tafazzoli, M ; Oskouie, A. A ; Sharif University of Technology
    Abstract
    Crohn's disease and celiac disease belong to a group of autoimmune conditions that affect the digestive system, specifically the small intestine. They both attack the digestive tract and share many symptoms. Thus, the discovery of proper methods would be a major step toward differentiating celiac disease from Crohn's disease. The aim of this study was to search for the metabolic biomarkers to differentiate between these two diseases. Proton nuclear magnetic resonance spectroscopy (1H NMR) was employed as the metabolic profiling method to look for serum metabolites that differentiate between celiac disease and Crohn's disease. Classification of celiac disease and Crohn's disease was done... 

    MRI-PET image fusion based on NSCT transform using local energy and local variance fusion rules

    , Article Journal of Medical Engineering and Technology ; Vol. 38, issue. 4 , 2014 , p. 211-219 Amini, N ; Fatemizadeh, E ; Behnam, H ; Sharif University of Technology
    Abstract
    Image fusion means to integrate information from one image to another image. Medical images according to the nature of the images are divided into structural (such as CT and MRI) and functional (such as SPECT, PET). This article fused MRI and PET images and the purpose is adding structural information from MRI to functional information of PET images. The images decomposed with Nonsubsampled Contourlet Transform and then two images were fused with applying fusion rules. The coefficients of the low frequency band are combined by a maximal energy rule and coefficients of the high frequency bands are combined by a maximal variance rule. Finally, visual and quantitative criteria were used to... 

    Protein fibrillation and nanoparticle interactions: Opportunities and challenges

    , Article Nanoscale ; Volume 5, Issue 7 , Jan , 2013 , Pages 2570-2588 ; 20403364 (ISSN) Mahmoudi, M ; Kalhor, H. R ; Laurent, S ; Lynch, I ; Sharif University of Technology
    2013
    Abstract
    Due to their ultra-small size, nanoparticles (NPs) have distinct properties compared with the bulk form of the same materials. These properties are rapidly revolutionizing many areas of medicine and technology. NPs are recognized as promising and powerful tools to fight against the human brain diseases such as multiple sclerosis or Alzheimer's disease. In this review, after an introductory part on the nature of protein fibrillation and the existing approaches for its investigations, the effects of NPs on the fibrillation process have been considered. More specifically, the role of biophysicochemical properties of NPs, which define their affinity for protein monomers, unfolded monomers,... 

    Spatial analysis and mapping of malaria risk in an endemic area, south of Iran: A GIS based decision making for planning of control

    , Article Acta Tropica ; Volume 122, Issue 1 , 2012 , Pages 132-137 ; 0001706X (ISSN) Hanafi Bojd, A. A ; Vatandoost, H ; Oshaghi, M. A ; Charrahy, Z ; Haghdoost, A. A ; Zamani, G ; Abedi, F ; Sedaghat, M. M ; Soltani, M ; Shahi, M ; Raeisi, A ; Sharif University of Technology
    2012
    Abstract
    Bashagard district is one of the important malaria endemic areas in southern Iran. From this region a total of 16,199 indigenous cases have been reported in recent years. The aim of this study was to determine the situation of the disease and provide the risk map for the area. ArcGIS9.2 was used for mapping spatial distribution of malaria incidence. Hot spots were obtained using evidence-based weighting method for transmission risk. Environmental factors including temperature, relative humidity, altitude, slope and distance to rivers were combined by weighted multi criteria evaluation for mapping malaria hazard area at the district level. Similarly, risk map was developed by overlaying... 

    Discriminating early stage AD patients from healthy controls using synchronization analysis of EEG

    , Article 2011 6th International Conference on Digital Information Management, ICDIM 2011 ; 2011 , Pages 282-287 ; 9781457715389 (ISBN) Jalili, M ; Sharif University of Technology
    Abstract
    In this paper we study how the meso-scale and micro-scale electroencephalography (EEG) synchronization measures can be used for discriminating patients suffering from Alzheimer's disease (AD) from normal control subjects. To this end, two synchronization measures, namely power spectral density and multivariate phase synchronization, are considered and the topography of the changes in patients vs. Controls is shown. The AD patients showed increased power spectral density in the frontal area in theta band and widespread decrease in the higher frequency bands. It was also characterized with decreased multivariate phase synchronization in the left fronto-temporal and medial regions, which was... 

    Parallel nonlinear analysis of weighted brain's gray and white matter images for Alzheimer's dementia diagnosis

    , Article 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC'10, 31 August 2010 through 4 September 2010, Buenos Aires ; 2010 , Pages 5573-5576 ; 9781424441235 (ISBN) Razavian, S. M. J ; Torabi, M ; Kim, K ; Sharif University of Technology
    2010
    Abstract
    In this study, we are proposing a novel nonlinear classification approach to discriminate between Alzheimer's Disease (AD) and a control group using T1-weighted and T2- weighted Magnetic Resonance Images (MRI's) of brain. Since T1-weighted images and T2-weighted images have inherent physical differences, obviously each of them has its own particular medical data and hence, we extracted some specific features from each. Then the variations of the relevant eigenvalues of the extracted features were tracked to pick up the most informative ones. The final features were assigned to two parallel systems to be nonlinearly categorized. Considering the fact that AD defects the white and gray regions... 

    Margination and adhesion of micro- and nanoparticles in the coronary circulation: a step towards optimised drug carrier design

    , Article Biomechanics and Modeling in Mechanobiology ; 2017 , Pages 1-17 ; 16177959 (ISSN) Forouzandehmehr, M ; Shamloo, A ; Sharif University of Technology
    Abstract
    Obstruction of left anterior descending artery (LAD) due to the thrombosis or atherosclerotic plaques is the leading cause of death worldwide. Targeted delivery of drugs through micro- and nanoparticles is a very promising approach for developing new strategies in clot-busting or treating restenosis. In this work, we modelled the blood flow characteristics in a patient-specific reconstructed LAD artery by the fluid–solid interaction method and based on physiological boundary conditions. Next, we provided a Lagrangian description of micro- and nanoparticles dynamics in the blood flow considering their Brownian motion and the particle–particle interactions. Our results state that the number of... 

    Inhibition mechanisms of a pyridazine-based amyloid inhibitor: as a β-sheet destabilizer and a helix bridge maker

    , Article Journal of Physical Chemistry B ; Volume 121, Issue 32 , 2017 , Pages 7633-7645 ; 15206106 (ISSN) Kalhor, H. R ; Jabbari, M. P ; Sharif University of Technology
    Abstract
    Conformational diseases have been investigated extensively in recent years; as a result, a number of drug candidates have been introduced as amyloid inhibitors; however, no effective therapies have been put forward. RS-0406 with pyridazine as its core chemical structure has so far shown promising results in inhibiting amyloid formation. In the present work, using molecular dynamics, we undertook the investigation of RS-0406 interactions with U-shaped Aβ1−42 and Aβ1−40 pentamers, Aβ1−42 monomers, and double-horseshoe-like Aβ1−42. To set better parameters for the small molecule, experimental and computational log P values were obtained. In addition, an analogue of RS-0406 was also simulated... 

    Smart nanostructures for cargo delivery: uncaging and activating by light

    , Article Journal of the American Chemical Society ; Volume 139, Issue 13 , 2017 , Pages 4584-4610 ; 00027863 (ISSN) Karimi, M ; Sahandi Zangabad, P ; Baghaee Ravari, S ; Ghazadeh, M ; Mirshekari, H ; Hamblin, M. R ; Sharif University of Technology
    Abstract
    Nanotechnology has begun to play a remarkable role in various fields of science and technology. In biomedical applications, nanoparticles have opened new horizons, especially for biosensing, targeted delivery of therapeutics, and so forth. Among drug delivery systems (DDSs), smart nanocarriers that respond to specific stimuli in their environment represent a growing field. Nanoplatforms that can be activated by an external application of light can be used for a wide variety of photoactivated therapies, especially light-triggered DDSs, relying on photoisomerization, photo-cross-linking/un-cross-linking, photoreduction, and so forth. In addition, light activation has potential in photodynamic... 

    A Postural control model to assess the improvement of balance rehabilitation in parkinson's disease

    , Article Proceedings of the IEEE RAS and EMBS International Conference on Biomedical Robotics and Biomechatronics, 26 August 2018 through 29 August 2018 ; Volume 2018-August , 2018 , Pages 1019-1024 ; 21551774 (ISSN) ; 9781538681831 (ISBN) Rahmati, Z ; Behzadipour, S ; Schouten, A. C ; Taghizadeh, G ; Sharif University of Technology
    Abstract
    Studies have shown that balance and mobility in people with Parkinson's disease (PD) can improve through rehabilitation interventions. However, until now no quantitative method investigated how these patients improve their balance control. In this study, a single inverted pendulum model with PID controller was used to describe the improvement of forty PD patients after a 12-session therapy program, and to compare their balance with twenty healthy subjects. The Center of Pressure (COP) data were recorded in seven sensory conditions - on rigid and foam surface, each with eyes open and closed, and with visual disturbance; and stance on rigid surface with attached vibrator to the Achilles... 

    Superheated water extraction of catechins from green tea leaves: Modeling and simulation

    , Article Scientia Iranica ; Volume 16, Issue 2 C , 2009 , Pages 99-107 ; 10263098 (ISSN) Goodarznia, I ; Abdollahi Govar, A ; Sharif University of Technology
    2009
    Abstract
    Catechins from fresh green tea leaves as potential sources of anticancer and antioxidant components were target materials in this work. Superheated water extraction, which is a kind of leaching operation, and solvent partition with chloroform and ethyl acetate were utilized to recover Catechins from tea leaves. Then, a mathematical model was developed to simulate the superheated water extraction of Catechins. The unsteady state mass balance of the solute in solid and superheated water phases led to two partial differential equations. The model was solved numerically using a linear equilibrium relationship. The model parameters were predicted applying existing experimental correlations. An... 

    Discrimination between Alzheimer's disease and control group in MR-images based on texture analysis using artificial neural network

    , Article ICBPE 2006 - 2006 International Conference on Biomedical and Pharmaceutical Engineering, Singapore, 11 December 2006 through 14 December 2006 ; 2006 , Pages 79-83 ; 8190426249 (ISBN); 9788190426244 (ISBN) Torabi, M ; Ardekani, R. D ; Fatemizadeh, E ; Sharif University of Technology
    2006
    Abstract
    In this study, we have proposed a novel method investigates MR-Images for normal and abnormal brains which effected by Alzheimer's Disease (AD) to extract 336 number of different features based on texture analysis. Before applying this algorithm, we have to use a registration method because of variety in size of normal and abnormal images. Consequently, the output of Texture Analysis System (TAS) is a vector containing 336 elements that are features extracted from texture. This vector is considered as the input of the Artificial Neural Network (ANN) which is feed-forward one. The features extracted from the Gray-level Co-occurrence Matrix (GLCM) have been interpreted and compared with normal... 

    Noninvasive detection of coronary artery disease by arterio-oscillo-graphy

    , Article IEEE Transactions on Biomedical Engineering ; Volume 52, Issue 4 , 2005 , Pages 743-747 ; 00189294 (ISSN) Pouladian, M ; Hashemi Golpayegani, M. R ; Abbaspour Tehrani Fard, A ; Bubvay Nejad, M ; Sharif University of Technology
    2005
    Abstract
    Coronary artery disease (CAD) causes oscillations in peripheral arteries. Oscillations of the walls of the brachial arteries of 51 patients were recorded [together with the electrocardiogram (ECG)] by an accelerometer at different cuff pressures. By analyzing the energy of the oscillations in the 30-250 Hz band, 16 of 22 patients with CAD and 26 of 29 non-CAD subjects were classified correctly, independent of the ECG, and with no effect of heart murmurs  

    Adaptive control strategy for treatment of hepatitis C infection

    , Article Industrial and Engineering Chemistry Research ; Volume 58, Issue 33 , 2019 , Pages 15262-15270 ; 08885885 (ISSN) Zeinali, S ; Shahrokhi, M ; Sharif University of Technology
    American Chemical Society  2019
    Abstract
    In this work, an efficient treatment strategy for hepatitis C disease using interferon (IFN) has been proposed on the basis of the back-stepping control technique. The basic model of the hepatitis C virus (HCV) has been considered for controller design. To tackle the problem of model parameter variations, the adaptive version of the back-stepping method has been utilized. For applying the proposed treatment, all states should be available while only the viral load is measured. To solve this problem, a nonlinear Luenberger-like observer has been designed to estimate the unmeasured states. In the proposed treatment, limitation of the drug efficacy has been taken into account. Asymptotical... 

    Development of a sensitive diagnostic device based on zeolitic imidazolate frameworks-8 using ferrocene-graphene oxide as electroactive indicator for pseudomonas aeruginosa detection

    , Article ACS Sustainable Chemistry and Engineering ; Volume 7, Issue 15 , 2019 , Pages 12760-12769 ; 21680485 (ISSN) Shahrokhian, S ; Ranjbar, S ; Sharif University of Technology
    American Chemical Society  2019
    Abstract
    Since Gram-negative bacteria have a predominant role in nosocomial infections, there are high demands to develop a fast and sensitive method for diagnosis of bacteria in clinical samples. To address this challenge, we designed a novel electrochemical biosensor based on aptamers immobilized in engineered zeolitic imidazolate Framework-8 (ZIFs-8) via EDC-NHS chemistry. Cyclic voltammetry and electrochemical impedance spectroscopy techniques were conducted to monitor the electrochemical characterization. With respect to unique π-πinteractions between aptamer and graphene oxide (GO), the differential pulse voltammetry technique was applied with ferrocene-graphene oxide (Fc-GO) as an... 

    Nanomaterials for photothermal and photodynamic cancer therapy

    , Article Applied Physics Reviews ; Volume 9, Issue 1 , 2022 ; 19319401 (ISSN) Nasseri, B ; Alizadeh, E ; Bani, F ; Davaran, S ; Akbarzadeh, A ; Rabiee, N ; Bahadori, A ; Ziaei, M ; Bagherzadeh, M ; Saeb, M. R ; Mozafari, M ; Hamblin, M. R ; Sharif University of Technology
    American Institute of Physics Inc  2022
    Abstract
    In recent years, the role of optically sensitive nanomaterials has become powerful moieties in therapeutic techniques and has become particularly emphasized. Currently, by the extraordinary development of nanomaterials in different fields of medicine, they have found new applications. Phototherapy modalities, such as photothermal therapy (PTT) by toxic heat generation and photodynamic therapy (PDT) by reactive oxygen species, are known as promising phototherapeutic techniques, which can overcome the limitations of conventional protocols. Moreover, nanomaterial-based PDT and PTT match the simultaneous immune therapy and increase the immune system stimulation resulting from the denaturation of... 

    Postural control learning dynamics in Parkinson's disease: Early improvement with plateau in stability, and continuous progression in flexibility and mobility

    , Article BioMedical Engineering Online ; Volume 19, Issue 1 , 2020 Rahmati, Z ; Behzadipour, S ; Schouten, A. C ; Taghizadeh, G ; Firoozbakhsh, K ; Sharif University of Technology
    BioMed Central Ltd  2020
    Abstract
    Background: Balance training improves postural control in Parkinson's disease (PD). However, a systematic approach for the development of individualized, optimal training programs is still lacking, as the learning dynamics of the postural control in PD, over a training program, are poorly understood. Objectives: We investigated the learning dynamics of the postural control in PD, during a balance-training program, in terms of the clinical, posturographic, and novel model-based measures. Methods: Twenty patients with PD participated in a balance-training program, 3 days a week, for 6 weeks. Clinical tests assessed functional balance and mobility pre-training, mid-training, and post-training.... 

    Shadow of cyber ostracism over remote environment: Implication on remote work challenges, virtual work environment and employee mental well-being during a Covid-19 pandemic

    , Article Acta Psychologica ; Volume 225 , 2022 ; 00016918 (ISSN) Yang, L ; Murad, M ; Mirza, F ; Chaudhary, N. I ; Saeed, M ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    This study aimed to identify the influence of workplace cyber ostracism on employee online work engagement and employee mental well-being with the mediating roles of remote work challenges such as loneliness, procrastination, work-home interference, and ineffective communication. As amidst lockdown due to COVID-19, the data was collected from 303 respondents through an online questionnaire that was distributed in virtual groups among friends, relatives, and other fellows who were working in the private sector organizations of Pakistan. The hypotheses were tested using the partial least square structural equation modeling PLS-SEM technique. The findings of this study showed that workplace... 

    Nonlinear robust adaptive sliding mode control of influenza epidemic in the presence of uncertainty

    , Article Journal of Process Control ; Volume 56 , 2017 , Pages 48-57 ; 09591524 (ISSN) Sharifi, M ; Moradi, H ; Sharif University of Technology
    Elsevier Ltd  2017
    Abstract
    In this paper, a nonlinear robust adaptive sliding mode control strategy is presented for the influenza epidemics in the presence of model uncertainties. The nonlinear epidemiological model of influenza with five state variables (the numbers of susceptible, exposed, infected, asymptomatic and recovered individuals) and two control inputs (vaccination and antiviral treatment) is considered. The objective of the proposed controller is decreasing the number of susceptible and infected humans to zero by tracking the desired scenarios. As a result of this decreasing, the number of exposed and asymptomatic individuals is also decreased and converged to the zero. Accordingly, it is shown that the... 

    Muscular activity comparison between non-amputees and transfemoral amputees during normal transient-state walking speed

    , Article Medical Engineering and Physics ; Volume 95 , 2021 , Pages 39-44 ; 13504533 (ISSN) Mehryar, P ; Shourijeh, M. S ; Rezaeian, T ; Khandan, A. R ; Messenger, N ; O'Connor, R ; Farahmand, F ; Dehghani Sanij, A ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    Research question: Would there be differences in muscle activation between healthy subjects’ (HS) dominant leg and transfemoral amputees’ (TFA) intact-leg/contralateral-limb (IL) during normal transient-state walking speed? Methods: The muscle activation patterns are obtained by calculating the linear envelope of the EMG signals for each group. The activation patterns/temporal changes are compared between-population using statistical parametric mapping (SPM). Results: Individual muscle activity showed significant differences in all muscles except vastus lateralis (VL), semitendinosus (SEM) and tensor fascia latae (TFL) activities. Significance: The information could be used by the therapists...