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    The validity and inter-rater reliability of a video-based posture-matching tool to estimate cumulative loads on the lower back

    , Article Journal of Biomedical Physics and Engineering ; Volume 12, Issue 4 , 2022 , Pages 417-430 ; 22517200 (ISSN) Ghaneh Ezabadi, S ; Abdoli Eramaki, M ; Arjmand, N ; Abouhossein, A ; Zakerian, S. A ; Sharif University of Technology
    Shriaz University of Medical Sciences  2022
    Abstract
    Background: Low back pain (LBP) is known as one of the most common workrelated musculoskeletal disorders. Spinal cumulative loads (CLs) during manual material handling (MMH) tasks are the main risk factors for LBP. However, there is no valid and reliable quantitative lifting analysis tool available for quantifying CLs among Iranian workers performing MMH tasks. Objective: This study aimed to investigate the validity and inter-rater reliability of a posture-matching load assessment tool (PLAT) for estimating the L5-S1 static cumulative compression (CC) and shear (CS) loads based on predictive regression equations. Material and Methods: This experimental study was conducted among six... 

    Submaximal electromyography-driven musculoskeletal modeling of the human trunk during static tasks: Equilibrium and stability analyses

    , Article Journal of Electromyography and Kinesiology ; Volume 65 , 2022 ; 10506411 (ISSN) Ghezelbash, F ; Shirazi Adl, A ; Gagnon, D ; Shahvarpour, A ; Arjmand, N ; Eskandari, A. H ; Larivière, C ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    Conventional electromyography-driven (EMG) musculoskeletal models are calibrated during maximum voluntary contraction (MVC) tasks, but individuals with low back pain cannot perform unbiased MVCs. To address this issue, EMG-driven models can be calibrated in submaximal tasks. However, the effects of maximal (when data points include the maximum contraction) and submaximal calibration techniques on model outputs (e.g., muscle forces, spinal loads) remain yet unknown. We calibrated a subject-specific EMG-driven model, using maximal/submaximal isometric contractions, and simulated different independent tasks. Both approaches satisfactorily predicted external moments (Pearson's correlation ∼... 

    WordPars: A tool for orthographic and phonological neighborhood and other psycholinguistic statistics in Persian

    , Article Behavior Research Methods ; Volume 54, Issue 4 , 2022 , Pages 1902-1911 ; 1554351X (ISSN) Esmaeelpour, E ; Saneei, S ; Nourbakhsh, M ; Sharif University of Technology
    Springer  2022
    Abstract
    This paper presents a Windows program providing statistics on word and non-word stimuli in Persian, including word frequency, orthographic and phonological length, orthographic and phonological neighbors, and transposed-letter neighbors. It also generates possible non-words that are orthographic neighbors of the target word. Persian is an under-represented Indo-European language that has historically been influenced by Arabic and adopted certain characteristics in its writing, e.g., the omission of short vowels. This tool aims to help researchers in psycholinguistics, specifically with regard to isolated word recognition in Persian. This downloadable program computes the aforementioned... 

    The association between motor modules and movement primitives of gait: A muscle and kinematic synergy study

    , Article Journal of Biomechanics ; Volume 134 , 2022 ; 00219290 (ISSN) Esmaeili, S ; Karami, H ; Baniasad, M ; Shojaeefard, M ; Farahmand, F ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    In spite of the extensive literature on the analysis of the muscle synergies during gait, the functionality of these synergies has not been studied in detail. This study explored the relationship between the motor modules and the kinematic maneuvers involved in human walking. Motion and surface electromyography data (of 28 trunk and lower extremity muscles) were acquired from ten healthy subjects during ten trials of self-selected speed gait each. The joint angle trajectories were half-wave rectified and divided into two independent positive directional degrees-of-freedom. The muscle and kinematic synergies were both extracted using the non-negative matrix factorization (NNMF) technique and... 

    Significant pathological voice discrimination by computing posterior distribution of balanced accuracy

    , Article Biomedical Signal Processing and Control ; Volume 73 , 2022 ; 17468094 (ISSN) Pakravan, M ; Jahed, M ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    The ability to speak lucidly plays a key role in social relations. Consequently, the role of the larynx is quite important, and timely diagnosis of laryngeal diseases has proved to be crucial. In this study, a simple computational model for inverse of speech production model is employed to extract the glottal waveform using speech signal. This waveform has useful information about vocal folds performance in terms of providing evidence for distinguishing pathological disorders. Furthermore, obtaining the significance of classification results is important, because it leads to reliable inferences. This study utilizes the sustained vowel sound /a/ and a well-referenced database, namely MEEI. In... 

    Automated analysis of karyotype images

    , Article Journal of Bioinformatics and Computational Biology ; Volume 20, Issue 3 , 2022 ; 02197200 (ISSN) Khazaei, E ; Emrany, A ; Tavassolipour, M ; Mahjoubi, F ; Ebrahimi, A ; Motahari, S. A ; Sharif University of Technology
    World Scientific  2022
    Abstract
    Karyotype is a genetic test that is used for detection of chromosomal defects. In a karyotype test, an image is captured from chromosomes during the cell division. The captured images are then analyzed by cytogeneticists in order to detect possible chromosomal defects. In this paper, we have proposed an automated pipeline for analysis of karyotype images. There are three main steps for karyotype image analysis: image enhancement, image segmentation and chromosome classification. In this paper, we have proposed a novel chromosome segmentation algorithm to decompose overlapped chromosomes. We have also proposed a CNN-based classifier which outperforms all the existing classifiers. Our... 

    Sensory representation of visual stimuli in the coupling of low-frequency phase to spike times

    , Article Brain Structure and Function ; Volume 227, Issue 5 , 2022 , Pages 1641-1654 ; 18632653 (ISSN) Zarei, M ; Jahed, M ; Dezfouli, M. P ; Daliri, M. R ; Sharif University of Technology
    Springer Science and Business Media Deutschland GmbH  2022
    Abstract
    Neural synchronization has been engaged in several brain mechanisms. Previous studies have shown that the interaction between the time of spiking activity and phase of local field potentials (LFPs) plays a key role in many cognitive functions. However, the potential role of this spike–LFP phase coupling (SPC) in neural coding is not fully understood. Here, we sought to investigate the role of this SPC for encoding the sensory properties of visual stimuli. To this end, we measured SPC strength in the preferred and anti-preferred motion directions of stimulus presented inside the receptive field of middle temporal (MT) neurons. We found a selective response in terms of SPC strength for... 

    Resting-State electroencephalogram (EEG) coherence over frontal regions in paranormal beliefs

    , Article Basic and Clinical Neuroscience ; Volume 13, Issue 4 , 2022 , Pages 573-584 ; 2008126X (ISSN) Narmashiri, A ; Hatami, J ; Khosrowabadi, R ; Sohrabi, A ; Sharif University of Technology
    Iran University of Medical Sciences  2022
    Abstract
    Introduction: Paranormal beliefs are defined as the belief in extrasensory perception, precognition, witchcraft, and telekinesis, magical thinking, psychokinesis, superstitions. Previous studies corroborate that executive brain functions underpin paranormal beliefs. To test this hypotheses, neurophysiological studies of brain activity are required. Methods: A sample of 20 students (10 girls, Mean±SD age: 22.50±4.07 years) were included in the current study. The absolute power of resting-state electroencephalogram (EEG) was analyzed in intra-hemispheric and inter-hemispheric coherence with eyes open. The paranormal beliefs were determined based on the total score of the revised paranormal... 

    Coordinated multivoxel coding beyond univariate effects is not likely to be observable in fMRI data

    , Article NeuroImage ; Volume 247 , 2022 ; 10538119 (ISSN) Pakravan, M ; Abbaszadeh, M ; Ghazizadeh, A ; Sharif University of Technology
    Academic Press Inc  2022
    Abstract
    Simultaneous recording of activity across brain regions can contain additional information compared to regional recordings done in isolation. In particular, multivariate pattern analysis (MVPA) across voxels has been interpreted as evidence for distributed coding of cognitive or sensorimotor processes beyond what can be gleaned from a collection of univariate effects (UVE) using functional magnetic resonance imaging (fMRI). Here, we argue that regardless of patterns revealed, conventional MVPA is merely a decoding tool with increased sensitivity arising from considering a large number of ‘weak classifiers’ (i.e., single voxels) in higher dimensions. We propose instead that ‘real’ multivoxel... 

    WordPars: A tool for orthographic and phonological neighborhood and other psycholinguistic statistics in Persian

    , Article Behavior Research Methods ; 2021 ; 1554351X (ISSN) Esmaeelpour, E ; Saneei, S ; Nourbakhsh, M ; Sharif University of Technology
    Springer  2021
    Abstract
    This paper presents a Windows program providing statistics on word and non-word stimuli in Persian, including word frequency, orthographic and phonological length, orthographic and phonological neighbors, and transposed-letter neighbors. It also generates possible non-words that are orthographic neighbors of the target word. Persian is an under-represented Indo-European language that has historically been influenced by Arabic and adopted certain characteristics in its writing, e.g., the omission of short vowels. This tool aims to help researchers in psycholinguistics, specifically with regard to isolated word recognition in Persian. This downloadable program computes the aforementioned... 

    Common coding of expected value and value uncertainty memories in the prefrontal cortex and basal ganglia output

    , Article Science Advances ; Volume 7, Issue 20 , 2021 ; 23752548 (ISSN) Ghazizadeh, A ; Hikosaka, O ; Sharif University of Technology
    American Association for the Advancement of Science  2021
    Abstract
    Recent evidence implicates both basal ganglia and ventrolateral prefrontal cortex (vlPFC) in encoding value memories. However, comparative roles of cortical and basal nodes in value memory are not well understood. Here, single-unit recordings in vlPFC and substantia nigra reticulata (SNr), within macaque monkeys, revealed a larger value signal in SNr that was nevertheless correlated with and had a comparable onset to the vlPFC value signal. The value signal was maintained for many objects (>90) many weeks after reward learning and was resistant to extinction in both regions and to repetition suppression in vlPFC. Both regions showed comparable granularity in encoding expected value and value... 

    Biomechanical analysis of the pelvis angular excursion in sagittal plane in response to asymmetric leg loading tasks in females with and without nonspecific chronic low back pain

    , Article Journal of Biomedical Physics and Engineering ; Volume 11, Issue 3 , 2021 , Pages 367-376 ; 22517200 (ISSN) Meftahi, N ; Kamali, F ; Parni Anpour, M ; Davoudi, M ; Sharif University of Technology
    Shriaz University of Medical Sciences  2021
    Abstract
    Background: Controlling pelvic excursions is the focus of stabilization exercises such as legs loading tasks in rehabilitation of non-specific chronic low back pain (NSCLBP) patients. Progression of these exercises is based on the ability to perform tasks with minimal sagittal pelvic excursions. In spite of emphasis on minimizing pelvic motions, no previous studies have investigated kinematic analysis of the pelvic excursions during leg loading exercises in NSCLBP patients. Objective: This study aims to investigate the sagittal pelvis excursion during performing asymmetric leg loading tasks in individuals with and without NSCLBP. Material and Methods: In this cross-sectional study, kinematic... 

    A novel coupled musculoskeletal finite element model of the spine – Critical evaluation of trunk models in some tasks

    , Article Journal of Biomechanics ; Volume 119 , 2021 ; 00219290 (ISSN) Rajaee, M. A ; Arjmand, N ; Shirazi Adl, A ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    Spine musculoskeletal (MS) models make simplifying assumptions on the intervertebral joint degrees-of-freedom (rotational and/or translational), representation (spherical or beam-like joints), and properties (linear or nonlinear). They also generally neglect the realistic structure of the joints with disc nuclei/annuli, facets, and ligaments. We aim to develop a novel MS model where trunk muscles are incorporated into a detailed finite element (FE) model of the ligamentous T12-S1 spine thus constructing a gold standard coupled MS-FE model. Model predictions are compared under some tasks with those of our earlier spherical joints, beam joints, and hybrid (uncoupled) MS-FE models. The coupled... 

    RCTP: Regularized common tensor pattern for rapid serial visual presentation spellers

    , Article Biomedical Signal Processing and Control ; Volume 70 , September , 2021 ; 17468094 (ISSN) Jalilpour, S ; Hajipour Sardouie, S ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    Common Spatial Pattern (CSP) is a powerful feature extraction method in brain-computer interface (BCI) systems. However, the CSP method has some deficiencies that limit its beneficiary. First, this method is not useful when data is noisy, and it is necessary to have a large dataset because CSP is inclined to overfit. Second, the CSP method uses just the spatial information of the data, and it cannot incorporate the temporal and spectral information. In this paper, we propose a new CSP-based algorithm which is capable of employing the information in all dimensions of data. Also, by defining the regularization term for each mode of information, we can diminish the noise effects and overfitting... 

    Coupled artificial neural networks to estimate 3D whole-body posture, lumbosacral moments, and spinal loads during load-handling activities

    , Article Journal of Biomechanics ; Volume 102 , 2020 Aghazadeh, F ; Arjmand, N ; Nasrabadi, A. M ; Sharif University of Technology
    Elsevier Ltd  2020
    Abstract
    Biomechanical modeling approaches require body posture to evaluate the risk of spine injury during manual material handling. The procedure to measure body posture via motion-analysis techniques as well as the subsequent calculations of lumbosacral moments and spine loads by, respectively, inverse-dynamic and musculoskeletal models are complex and time-consuming. We aim to develop easy-to-use yet accurate artificial neural networks (ANNs) that predict 3D whole-body posture (ANNposture), segmental orientations (ANNangle), and lumbosacral moments (ANNmoment) based on our measurements during load-handling activities. Fifteen individuals each performed 135 load-handling activities by reaching (0... 

    Social robotics, education, and religion in the islamic world: an iranian perspective

    , Article Science and Engineering Ethics ; Volume 26, Issue 5 , 2020 , Pages 2709-2734 Alemi, M ; Taheri, A. R ; Shariati, A ; Meghdari, A ; Sharif University of Technology
    Springer Science and Business Media B.V  2020
    Abstract
    The social impact of robotics applied to domains such as education, religion, nursing, and therapy across the world depends on the level of technology as well as the culture in which it is used. By studying how robots are used in Iran, a technologically-savvy country with a long history and a rich culture, we explore their possible impact on interrelated areas of religious and ethical features in education in an Islamic society. To accomplish this task, a preliminary exploratory study was conducted using two social robots as teaching assistants in Islamic religion classes for 42 elementary students. More than 90% of the participants in the study absolutely preferred the robot-assisted... 

    Marker-less versus marker-based driven musculoskeletal models of the spine during static load-handling activities

    , Article Journal of Biomechanics ; Volume 112 , 2020 Asadi, F ; Arjmand, N ; Sharif University of Technology
    Elsevier Ltd  2020
    Abstract
    Evaluation of workers’ body posture in workstations is a prerequisite to estimate spinal loads and assess risk of injury for the subsequent design of preventive interventions. The Microsoft Kinect™ sensor is, in this regard, advantageous over the traditional skin-marker-based optical motion capture systems for being marker-less, portable, cost-effective, and easy-to-use in real workplaces. While several studies have demonstrated the validity/reliability of the Kinect for posture measurements especially during gait trials, its capability to adequately drive a detailed spine musculoskeletal model for injury risk assessments remains to be investigated. Lumbosacral (L5-S1) load predictions of a... 

    A new deep convolutional neural network design with efficient learning capability: Application to CT image synthesis from MRI

    , Article Medical Physics ; Volume 47, Issue 10 , 2020 , Pages 5158-5171 Bahrami, A ; Karimian, A ; Fatemizadeh, E ; Arabi, H ; Zaidi, H ; Sharif University of Technology
    John Wiley and Sons Ltd  2020
    Abstract
    Purpose: Despite the proven utility of multiparametric magnetic resonance imaging (MRI) in radiation therapy, MRI-guided radiation treatment planning is limited by the fact that MRI does not directly provide the electron density map required for absorbed dose calculation. In this work, a new deep convolutional neural network model with efficient learning capability, suitable for applications where the number of training subjects is limited, is proposed to generate accurate synthetic computed tomography (sCT) images from MRI. Methods: This efficient convolutional neural network (eCNN) is built upon a combination of the SegNet architecture (a 13-layer encoder-decoder structure similar to the... 

    Using robotic mechanical perturbations for enhanced balance assessment

    , Article Medical Engineering and Physics ; Volume 83 , 2020 , Pages 7-14 Baselizadeh, A ; Behjat, A ; Torabi, A ; Behzadipour, S ; Sharif University of Technology
    Elsevier Ltd  2020
    Abstract
    Balance impairment is critical for many patient groups such as those with neural and musculoskeletal disorders and also the elderly. Accurate and objective assessment of balance performance has led to the development of several indices based on the measurement of the center of pressure. In this study, a robotic device was designed and fabricated to provide controlled and repeatable mechanical perturbations to the standing platform of the user. The device uses servo-controlled actuators and two parallel mechanisms to provide independent rotations in mediolateral and anterior-posterior directions. The device also provides visual feedback of the center of pressure position to the user.... 

    Interview based connectivity analysis of EEG in order to detect deception

    , Article Medical Hypotheses ; Volume 136 , 2020 Daneshi Kohan, M ; Motie NasrAbadi, A ; sharifi, A ; Bagher Shamsollahi, M ; Sharif University of Technology
    Churchill Livingstone  2020
    Abstract
    Deception is mentioned as an expression or action which hides the truth and deception detection as a concept to uncover the truth. In this research, a connectivity analysis of Electro Encephalography study is presented regarding cognitive processes of an instructed liar/truth-teller about identity during an interview. In this survey, connectivity analysis is applied because it can provide unique information about brain activity patterns of lying and interaction among brain regions. The novelty of this paper lies in applying an open-ended questions interview protocol during EEG recording. We recruited 40 healthy participants to record EEG signal during the interview. For each subject,...