Sharif Digital Repository

Mixing has become a challenge in micro-fluidic systems because of the low Reynolds number in micro-channels. The method which is implemented in this paper is to use freely-swimming bacteria to enhance the mixing process. Accordingly, the Serratia marcescens bacteria were used for this matter. The mixing performance of the system is quantified by measuring the diffusion rate of Rhodamine B in a particular section of a channel connected to a chamber with varying Rhodamine B concentration. The concentration of Rhodamine B was measured using the Laser Induced Fluorescence (LIF) technique. The channel is in the form of a pipe and is closed on the extending side. In this paper, it is demonstrated... 

The physical properties and chemical structure of a new biosurfactant (licheniformin) produced by Bacillus licheniformis MS3 were investigated. The purified biosurfactant was identified as a lipopeptide with amino acid sequence of Gly, Ala, Val, Asp, Ser, Gly, Tyr and a lactone linkage between the carboxyl group of Aspargine and hydroxyl group of Tyrosine residue. The fatty acid moiety was attached to N-terminal amino acid residue through an amide bond. The purified licheniformin could lower the surface tension of water from 72 to 38 mN/m at concentrations higher than 15 μg/mL and its relative emulsion volume (EV%) was equal to 36%. It also showed stable surface activity over a wide range of... 

Graphene-based materials are revealing the leading edge of advanced technology for their exceptional physical and chemical properties. Chemical manipulation on graphene surface to tailor its unique properties and modify atomic structures is being actively pursued. Therefore, the discovery of robust and general protocols to anchor active functionality on graphene basal plane is still of great interest. Multicomponent reactions promise an enormous level of interest due to addressing both diversity and complexity in combinatorial synthesis, in which more than two starting compounds react to form a product derived from entire inputs. In this article, we present the first covalent... 

Graphene oxide platelets synthesized by using a chemical exfoliation method were deposited on anatase TiO2 thin films. Postannealing of the graphene oxide/TiO2 thin films at 400 °C in air resulted in partial formation of a Ti-C bond between the platelets and their beneath thin film. By using atomic force microscopy and X-ray photoelectron spectroscopy analyses, UV-visible light-induced photocatalytic reduction of the graphene oxide platelets of the annealed graphene oxide/TiO2. thin films immersed in ethanol was studied for the different irradiation times. After 4 h of photocatalytic reduction, the vertical space between the platelets decreased from about 1.1 to less than 0.8 nm and the... 

Silver nanoparticles (NPs) stored in pore-arrays (pa) SU-8 photoresist layer were utilized as an antibacterial nanocomposition against E. coli bacteria. The pa-SU-8 matrix was fabricated by an optical interference lithography method resulting in small pores with a diameter of ∼50 nm and a depth of ∼100 nm. The Ag NPs were deposited on the soft polymeric matrix at different drying temperatures of 50 and 90 °C. X-ray photoelectron spectroscopy showed that the deposited silver NPs were substantially in the metallic state, independent from the drying condition. However, the concentration of the immobilized Ag NPs on the film surface increased (by a factor of 2.5) at the higher drying... 

In this work, aligned and compact Ag nanorods capped by sol-gel mesoporous TiO2 layer were grown on Ti/Si(100) in order to be applied in antibacterial applications. The Ag nanorods with a high effective surface were grown by applying an electric field perpendicular to the surface of the Ag/Ti/Si thin film while it was being heat-treated at 700 °C in an Ar + H2 ambient. The grown silver nanorods had widths and lengths of 20-50 and 250-500 nm with an abundance in {100} facet, respectively. The TiO2 cap layer also had the specific surface area, the total pore volume and the pore diameter of 474 m2/g, 0.49 cm3/g and 8.0 nm, respectively. Antibacterial activities of the TiO2-capped Ag nanorods... 

The effect of an electric field on the antibacterial activity of columnar aligned silver nanorods was investigated. Silver nanorods with a polygonal cross section, a width of 20-60 nm and a length of 260-550 nm, were grown on a titanium interlayer by applying an electric field perpendicular to the surface of a Ag/Ti/Si(100) thin film during its heat treatment at 700 °C in an Ar+H2 environment. The optical absorption spectrum of the silver nanorods exhibited two peaks at wavelengths of 350 and 395 nm corresponding to the main surface plasmon resonance bands of the one-dimensional silver nanostructures. It was found that the silver nanorods with an fcc structure were bounded mainly by {100}... 

Microbial enhanced oil recovery (MEOR) is receiving renewed interest worldwide in recent years as a viable method while not damaging the reservoir is proven to be remarkably effective, however to some extent costly. This method is based on microorganisms' activities to reduce residual oil of reservoirs, which is dependent on behavior of inherent microorganisms or injection of bioproduct of external microorganisms. In this work, five bacterial species were taken from MIS crude oil that is one of the aging Persian fractured reservoirs. These microorganisms are substantially strong in increasing oil recovery especially by reducing IFT and other MEOR mechanisms such as change of wettability of... 

During any microbial enhanced oil recovery process, both cells and the metabolic products of bacteria govern the tertiary oil recovery efficiency. However, very accurate examination is needed to find the functionality of these tiny creatures at different reservoir conditions. In this regard, the effect of cell structure on ultimate microbial recovery efficiency which is the most dominant mechanism based on the microorganism types (gram-negative or gram-positive) was systematically investigated. At the first stage, possible different active mechanisms using Bacillus stearothermophilus SUCPM#14 strain were tested using specially designed injection protocol, in situ and ex situ core flooding... 

In the current study, a facile green synthesis of silver-gelatin core-shell nanostructures (spherical, spherical/cubic hybrid, and cubic, DLS diameter: 4.1-6.9 nm) is reported via the wet chemical synthesis procedure. Sunlight-UV as an available reducing agent cause mild reduction of silver ions into the silver nanoparticles (Ag-NPs). Gelatin protein, as an effective capping/shaping agent, was used in the reaction to self-assemble silver nanostructures. The formation of silver nanostructures and their self-assembly pattern was confirmed by SEM, AFM, and TEM techniques. Further investigations were carried out using zeta-potential, UV-Vis, FTIR, GPC, and TGA/DTG/DTA data. The prepared Ag-NPs... 

The effect of thickness of TiO2 coating on synergistic photocatalytic activity of TiO2 (anatase)/α-Fe 2O3/glass thin films as photocatalysts for degradation of Escherichia coli bacteria in a low-concentration H2O2 solution and under visible light irradiation was investigated. Nanograined α-Fe2O3 films with optical band-gap of 2.06 eV were fabricated by post-annealing of thermal evaporated iron oxide thin films at 400 °C in air. Increase in thickness of the Fe2O3 thin film (here, up to 200 nm) resulted in a slight reduction of the optical band-gap energy and an increase in the photoinactivation of the bacteria. Sol-gel TiO2 coatings were deposited on the α-Fe2O 3 (200 nm)/glass films, and... 

In this study, we have investigated the potential of a native bacterial strain isolated from an Iranian oil field for the production of biosurfactant. The bacterium was identified to be Bacillus mycoides by biochemical tests and 16S ribotyping. The biosurfactant, which was produced by this bacterium, was able to reduce the surface tension of media to 34. mN/m. Compositional analysis of the produced biosurfactant has been carried out by thin layer chromatography (TLC) and FT-IR. The biosurfactant produced by the isolate was characterized as lipopeptide derivative. Biosurfactant production was optimized by the combination of central composite design (CCD) and response surface methodology... 

CuO nanoparticles with average diameter of about 20. nm were accumulated on surface of sol-gel silica thin films heat treated at 300 °C in air. Heat treatment of the CuO nanoparticles at 600 °C in a reducing environment resulted in effective reduction of the nanoparticles and penetration of them into the film. While the thin films heat treated at 300 °C exhibited a strong antibacterial activity against Escherichia coli bacteria, the reducing process decreased their antibacterial activity. However, by definition of normalized antibacterial activity (antibacterial activity/surface concentration of coppers) it was found that Cu nanoparticles were more toxic to the bacteria than the CuO... 

In this study a membrane bioreactor (MBR) has been studied experimentally for the treatment of oil field wastewater (produced water). This type of wastewater is characterised with relativity moderate to high amount of salt and oil. The normal bacteria which are growing in conventional activated sludge and MBR cannot withstand at these adverse conditions, therefore it is necessary to be adapted. In this study, different samples from sea sediment in Bushehr (south of Iran) were analysed and different groups of bacteria were isolated and adapted for surveying under high salinity conditions. The performance and efficiency of these bacteria in the degradation of model oil has been studied. The... 

Petroleum products which are used in a wide variety of industries as energy sources and raw materials have become a major concern in pollution of terrestrial and marine environments. The purpose of this study was to assess the potential of indigenous microbial isolates for degradation of diesel fuel. Two most proficient bacterial strains among five isolated strains from polluted soil of an industrial refinery were studied. The isolates then were identified as Pseudomonas aeruginosa and Bacillus subtilis using biochemical tests and 16S rRNA gene sequence analyses. P. aeruginosa showed higher biodegradation efficiency than B. subtilis in shaking flask containing diesel-contaminated water. P.... 

The visible light photocatalytic activity of α-Fe2O3 nanograin chains coated by anatase TiO2 nanolayer, as a photocatalyst thin film for inactivation of Escherichia coli bacteria, was investigated for the solutions containing 106 colony forming units per milliliter of the bacteria, without and with H2O2 (60 μM). Thin films of the α-Fe2O3 nanograins with the grain size of 40-280 nm were grown on glass substrates by post-annealing of the thermal evaporated Fe3O4 thin films at 400 °C in air. The TiO2 layer with thickness of about 20 nm was coated on the nanograins by dipping the Fe2O3 thin films in a prepared TiO2 sol and re-annealing them at 400 °C in air. The antibacterial activity of the... 

TiO2/multi-wall carbon nanotube (MWNT) heterojunction arrays were synthesized and immobilized on Si(0 0 1) substrate as photocatalysts for inactivation of Escherichia coli bacteria. The vertically aligned MWNT arrays were grown on ∼5 nm Ni thin film deposited on the Si by using plasma enhanced chemical vapor deposition at 650 °C. Then, the MWNTs were coated by TiO2 using dip-coating sol-gel method. Post annealing of the TiO2/MWNTs at 400 °C resulted in crystallization of the TiO2 coating and formation of Ti-C and Ti-O-C carbonaceous bonds at the heterojunction. The visible light-induced photoinactivation of the bacteria increased from MWNTs to TiO2 to TiO2/MWNTs, in which the bacteria could... 

Bactericidal activity of high concentration Ag nanoparticles immobilized on surface of an aqueous sol-gel silica thin film was investigated against Escherichia coli and Staphylococcus aureus bacteria. Size of the surface nanoparticles was estimated in the range of 35-80 nm by using atomic force microscopy. Due to accumulation of the silver nanoparticles at near the surface (at depth of 6 nm and about 40 times greater than the silver concentration in the sol), the synthesized Ag-SiO2 thin film (with area of 10 mm2) presented strong antibacterial activities against E. coli and S. aureus bacteria with relative rate of reduction of the viable bacteria of 1.05 and 0.73 h-1 for initial... 

Bacterial toxicity of graphene nanosheets in the form of graphene nanowalls deposited on stainless steel substrates was investigated for both Gram-positive and Gram-negative models of bacteria. The graphene oxide nanowalls were obtained by electrophoretic deposition of Mg2+-graphene oxide nanosheets synthesized by a chemical exfoliation method. On the basis of measuring the efflux of cytoplasmic materials of the bacteria, it was found that the cell membrane damage of the bacteria caused by direct contact of the bacteria with the extremely sharp edges of the nanowalls was the effective mechanism in the bacterial inactivation. In this regard, the Gram-negative Escherichia coli bacteria with an... 

Antibacterial activity of sol-gel synthesized Ag-TiO2 nanocomposite layer (30nm) deposited on rough anatase (a) TiO2 thin film (~200nm in thickness) was investigated against Escherichia coli bacteria, in dark and also in exposure to UV light. The nanocomposite thin films were transparent with a surface plasmon resonance absorption band at a wavelength of 410nm. The metallic silver nanoparticles with an average diameter of 30nm and fcc crystalline structure were self-accumulated on surface of a mesoporous and aqueous TiO2 layer with a capillary pore structure having a pore radius of 3.0nm. By adding the silver nanoparticles in the TiO2 layer, recombination of the photoexcited electron-hole...