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    Synthesis of nanobentonite–poly(vinyl alcohol)–bacterial cellulose nanocomposite by electrospinning for wound healing applications

    , Article Physica Status Solidi (A) Applications and Materials Science ; Volume 217, Issue 6 , 2020 Zeaiean Firouzabadi, P ; Ghanbari, H ; Mahmoudi, N ; Haramshahi, S. M. A ; Javadpour, J ; Sharif University of Technology
    Wiley-VCH Verlag  2020
    Abstract
    Polymer-based composites are used for wound healing applications. This work aims to prepare an inorganic-polymer nanocomposite based on bentonite, poly(vinyl alcohol), and bacterial cellulose by electrospinning for wound healing. The nanocomposite is synthesized using a solution intercalation technique, with 1–2 wt% nanobentonite concentration variation. The effects of commercial and laboratory-synthesized nanobentonite as well as the extract of the green walnut shell (EGWS) are examined and characterized by different techniques. The addition of nanobentonite increases the average size of fibers and tensile strength up to 200 nm and more than 15 MPa, respectively, due to the presence of... 

    Analysis of the growth process of neural cells in culture environment using image processing techniques

    , Article 13th International Computer Society of Iran Computer Conference on Advances in Computer Science and Engineering, CSICC 2008, Kish Island, 9 March 2008 through 11 March 2008 ; Volume 6 CCIS , 2008 , Pages 732-736 ; 18650929 (ISSN); 3540899847 (ISBN); 9783540899846 (ISBN) Mirsafian, A ; Isfahani, S. N ; Kasaei, S ; Mobasheri, H ; Sharif University of Technology
    2008
    Abstract
    Here we present an approach for processing neural cells images to analyze their growth process in culture environment. We have applied several image processing techniques for: 1- Environmental noise reduction, 2- Neural cells segmentation, 3- Neural cells classification based on their dendrites' growth conditions, and 4- neurons' features Extraction and measurement (e.g., like cell body area, number of dendrites, axon's length, and so on). Due to the large amount of noise in the images, we have used feed forward artificial neural networks to detect edges more precisely. © 2008 Springer-Verlag  

    Conifer: clonal tree inference for tumor heterogeneity with single-cell and bulk sequencing data

    , Article BMC Bioinformatics ; Volume 22, Issue 1 , 2021 ; 14712105 (ISSN) Baghaarabani, L ; Goliaei, S ; Foroughmand Araabi, M. H ; Shariatpanahi, P ; Goliaei, B ; Sharif University of Technology
    BioMed Central Ltd  2021
    Abstract
    Background: Genetic heterogeneity of a cancer tumor that develops during clonal evolution is one of the reasons for cancer treatment failure, by increasing the chance of drug resistance. Clones are cell populations with different genotypes, resulting from differences in somatic mutations that occur and accumulate during cancer development. An appropriate approach for identifying clones is determining the variant allele frequency of mutations that occurred in the tumor. Although bulk sequencing data can be used to provide that information, the frequencies are not informative enough for identifying different clones with the same prevalence and their evolutionary relationships. On the other... 

    Multifunctional 3D hierarchical bioactive green carbon-based nanocomposites

    , Article ACS Sustainable Chemistry and Engineering ; Volume 9, Issue 26 , 2021 , Pages 8706-8720 ; 21680485 (ISSN) Rabiee, N ; Bagherzadeh, M ; Ghadiri, A. M ; Kiani, M ; Fatahi, Y ; Tavakolizadeh, M ; Pourjavadi, A ; Jouyandeh, M ; Saeb, M. R ; Mozafari, M ; Shokouhimehr, M ; Varma, R. S ; Sharif University of Technology
    American Chemical Society  2021
    Abstract
    Carbon-based nanocarriers such as multiwall carbon nanotubes (MWCNTs) and reduced graphene oxide (rGO) have shown promising delivery capabilities due to their low immunogenicity, superior internalization, and suitable cell penetration efficiency. Herein, a molecular engineering strategy is advanced for the one-pot synthesized rGO/MWCNT/Fe3O4/ZnO to enhance the stability of the nanocarrier in the biological matrix; green synthesized ZnO was responsible for water uptake and reduced cytotoxicity, while Fe3O4controlled the cellular internalization for gene delivery. Surface morphology of the ensuing nanocomposite was correlated with photocatalytic and gene delivery (CRISPR/Cas9) features. For... 

    Natural polymers decorated mof-mxene nanocarriers for co-delivery of doxorubicin/pCRISPR

    , Article ACS Applied Bio Materials ; Volume 4, Issue 6 , 2021 , Pages 5106-5121 ; 25766422 (ISSN) Rabiee, N ; Bagherzadeh, M ; Jouyandeh, M ; Zarrintaj, P ; Saeb, M. R ; Mozafari, M ; Shokouhimehr, M ; Varma, R. S ; Sharif University of Technology
    American Chemical Society  2021
    Abstract
    A one-pot and facile method with assistance of high gravity was applied for the synthesis of inorganic two-dimensional MOF-5 embedded MXene nanostructures. The innovative inorganic MXene/MOF-5 nanostructure was applied in co-delivery of drug and gene, and to increase its bioavailability and interaction with the pCRISPR, the nanomaterial was coated with alginate and chitosan. The polymer-coated nanosystems were fully characterized, and the sustained DOX delivery and comprehensive cytotoxicity studies were conducted on the HEK-293, PC12, HepG2, and HeLa cell lines, demonstrating acceptable and excellent cell viability at both very low (0.1 μg.mL-1) and high (10 μg·mL-1) concentrations. The... 

    Pressure-engineered electrophoretic deposition for gentamicin loading within osteoblast-specific cellulose nanofiber scaffolds

    , Article Materials Chemistry and Physics ; Volume 272 , 2021 ; 02540584 (ISSN) Rahighi, R ; Panahi, M ; Akhavan, O ; Mansoorianfar, M ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    Multi-component nanocomposite thin films (composed of cellulose nanofiber (CNF), alginate, bioglass nanoparticles (BG NPs) and gentamicin) were prepared by using cathodic electrophoretic deposition (EPD) under different isostatic pressures of 10−2 mbar (LP), atmospheric (AP), and 5 bar (HP). According to thermal gravity analysis, larger amounts of CNF and alginate could be deposited on the surface at the AP condition in comparison with the LP and HP conditions. On the other hand, higher amounts of the BG NPs could be deposited at the LP condition as compared to the other conditions. The drug (gentamicin) loading/releasing of the samples prepared at the HP condition was found to be higher... 

    Fabrication and evaluation of controlled release of doxorubicin loaded UiO-66-NH2 metal organic frameworks

    , Article International Journal of Engineering, Transactions B: Applications ; Volume 34, Issue 8 , 2021 , Pages 1874-1881 ; 1728144X (ISSN) Rakhshani, N ; Hassanzadeh Nemati, N ; Ramezani Saadatabadi, A ; Sadrnezhaad, S. K ; Sharif University of Technology
    Materials and Energy Research Center  2021
    Abstract
    The metal-organic frameworks (MOFs) due to their large specific surface area and high biocompatibility are suitable as carriers for drug delivery systems (DDSs). In the present study, doxorubicin (DOX) as an anticancer drug was loaded into UiO-66-NH2 MOFs to decrease the adverse side effects of pristine DOX use and to increase its efficiency through the controlled release of DOX from MOFs. The MOFs were synthesized via microwave heating method and characterized using X-ray diffraction, scanning electron microscopy, and Brunauer-Emmett- Teller analysis. The drug loading efficiency, drug release profiles from synthesized MOFs and pharmacokinetic studies were investigated. The biocompatibility... 

    Gold nanoparticles loaded into niosomes: A novel approach for enhanced antitumor activity against human ovarian cancer

    , Article Advanced Powder Technology ; Volume 32, Issue 12 , 2021 , Pages 4711-4722 ; 09218831 (ISSN) Rezaie Amale, F ; Ferdowsian, S ; Hajrasouliha, S ; Kazempoor, R ; Mirzaie, A ; Sedigh Dakkali, M ; Akbarzadeh, I ; Mohammadmahdi Meybodi, S ; Mirghafouri, M ; Sharif University of Technology
    Elsevier B.V  2021
    Abstract
    In the current study, gold nanoparticles (AuNPs) were prepared using the green synthesis method using Artemisia annua extract, loaded into niosomes, and investigated their cytotoxicity and apoptotic effects. To optimize the niosomal formulation containing AuNPs, the effects of surfactants: cholesterol molar ratio, Span 60: Tween 60 M ratio, and AuNP concentration (µg/mL) were investigated. After examining the drug release profile, mathematical models were assessed to predict release kinetic. The cytotoxicity of noisome encapsulated AuNPs and free AuNPs was evaluated against human ovarian cancer cell line (A2780) by MTT assay. The apoptotic/necrosis ratio was studied using flow cytometry as... 

    The fabrication and characterization of bioactive Akermanite/Octacalcium phosphate glass-ceramic scaffolds produced via PDC method

    , Article Ceramics International ; Volume 47, Issue 5 , 2021 , Pages 6653-6662 ; 02728842 (ISSN) Abdollahi, S ; Paryab, A ; Khalilifard, R ; Anousheh, M ; Malek Khachatourian, A ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    In the present study, a bioactive silicate-phosphate glass-ceramic scaffold was fabricated via the polymer-derived ceramics (PDC) method. K2HPO4 phosphate salt was used as the P2O5 precursor in this method. The effect of K2HPO4 wt% and heat treatment temperatures (900–1100 °C) was evaluated. It was observed that although increasing the wt% of K2HPO4 led to the formation of scaffolds with higher densities and strengths, it could also increase the formation of the calcium phase, which could result in improper release behavior of scaffolds. On the other hand, higher heat treatment temperatures enhanced the strength of the scaffolds but eliminated the bioactive octacalcium phosphate (OCP) phase.... 

    The fabrication and characterization of bioactive Akermanite/Octacalcium phosphate glass-ceramic scaffolds produced via PDC method

    , Article Ceramics International ; Volume 47, Issue 5 , 2021 , Pages 6653-6662 ; 02728842 (ISSN) Abdollahi, S ; Paryab, A ; Khalilifard, R ; Anousheh, M ; Malek Khachatourian, A ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    In the present study, a bioactive silicate-phosphate glass-ceramic scaffold was fabricated via the polymer-derived ceramics (PDC) method. K2HPO4 phosphate salt was used as the P2O5 precursor in this method. The effect of K2HPO4 wt% and heat treatment temperatures (900–1100 °C) was evaluated. It was observed that although increasing the wt% of K2HPO4 led to the formation of scaffolds with higher densities and strengths, it could also increase the formation of the calcium phase, which could result in improper release behavior of scaffolds. On the other hand, higher heat treatment temperatures enhanced the strength of the scaffolds but eliminated the bioactive octacalcium phosphate (OCP) phase.... 

    Fabrication of a novel 3D scaffold for cartilage tissue repair: In-vitro and in-vivo study

    , Article Materials Science and Engineering C ; Volume 128 , 2021 ; 09284931 (ISSN) Haghighi, P ; Shamloo, A ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    Self-repairing is not an advanced ability of articular cartilage. Tissue engineering has provided a novel way for reconstructing cartilage using natural polymers because of their biocompatibility and bio-functionality. The purpose of cartilage tissue engineering is to design a scaffold with proper pore structure and similar biological and mechanical properties to the native tissue. In this study, porous scaffolds prepared from gelatin, chitosan and silk fibroin were blended with varying ratios. Between the blends of chitosan (C), gelatin (G) and silk fibroin (S), the scaffold with the weight per volume ratio of 2:2:3 (w/v) showed the most favorable and higher certain properties than the... 

    Design, preparation, and characterization of silk fibroin/carboxymethyl cellulose wound dressing for skin tissue regeneration applications

    , Article Polymer Engineering and Science ; Volume 62, Issue 9 , 2022 , Pages 2741-2749 ; 00323888 (ISSN) Farshi, P ; Salarian, R ; Rabiee, M ; Alizadeh, S ; Gholipourmalekabadi, M ; Ahmadi, S ; Rabiee, N ; Sharif University of Technology
    John Wiley and Sons Inc  2022
    Abstract
    Silk fibroin (SF) has been broadly applied in wound dressing fabrication because of its proper features for wound healing. In this work, we developed a carboxymethyl cellulose (CMC)/gelatin blend film with different concentrations of glycerol, and modified the optimized film with an SF layer through electrospinning process. Tensile strength and cell viability evaluation of blend films demonstrated that the glycerol content of 3% could be suitable as the substrate layer for the two-layer wound dressing. The morphology of the blend film and electrospun nanofibers was obtained from scanning electron microscopy (SEM) and Fourier transform infrared spectroscopy (FTIR). It concluded that... 

    ZnO-incorporated polyvinylidene fluoride/poly(ε-caprolactone) nanocomposite scaffold with controlled release of dexamethasone for bone tissue engineering

    , Article Applied Physics A: Materials Science and Processing ; Volume 128, Issue 8 , 2022 ; 09478396 (ISSN) FotouhiArdakani, F ; Mohammadi, M ; Mashayekhan, S ; Sharif University of Technology
    Springer Science and Business Media Deutschland GmbH  2022
    Abstract
    Here we report on the development of a hybrid nanofibrous scaffold made from polyvinylidene fluoride (PVDF) nanofibers embedding zinc oxide nanorods (ZnOns), and poly(ε-caprolactone) (PCL) nanofibers incorporating dexamethasone (DEX)-loaded chitosan nanoparticles using dual-electrospinning method. Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), scanning electron microscopy (SEM), and tensile analysis were carried out for physiochemical characterization of the scaffolds, followed by DEX release profile. In addition, an MTT assay was conducted to assess the viability of mouse bone marrow-derived mesenchymal stem cells (mBMSCs) on the hybrid nanofibrous scaffold.... 

    Comparative study of commercial media to improve GMP manufacturing of recombinant human interferon β-1a by CHO cells in perfusion bioreactor

    , Article Cytotechnology ; Volume 74, Issue 6 , 2022 , Pages 669-680 ; 09209069 (ISSN) Sedighikamal, H ; Karimi Mostofi, R ; Sattarzadeh, A ; Shahbazi, M ; Aghazadeh, H ; Sharif University of Technology
    Springer Science and Business Media B.V  2022
    Abstract
    Chinese hamster ovary cells are the main cellular factories for production of a wide range of recombinant proteins in biopharmaceutical industry. Recombinant human Interferon beta-1a (rh-IFN β-1a), as a cytokine is broadly used to treat multiple sclerosis. In this work, the cell line producing rh-IFN β-1a was studied to improve cell density along with the specific expression. For this reason different cell culture experiments were done using different commercial serum-free media to find the appropriate media providing higher cell density. It was shown DMEMF12, DMEM:ProCHO5, and CHO-S-SFM II led to higher cell density and shorter doubling time. Next, using these media, fed-batch, and... 

    Synthesis and characterization of a chitosan/gelatin transparent film crosslinked with a combination of EDC/NHS for corneal epithelial cell culture scaffold with potential application in cornea implantation

    , Article International Journal of Polymeric Materials and Polymeric Biomaterials ; Volume 71, Issue 8 , 2022 , Pages 568-578 ; 00914037 (ISSN) Shahin, A ; Ramazani S. A, A ; Mehraji, S ; Eslami, H ; Sharif University of Technology
    Taylor and Francis Ltd  2022
    Abstract
    The diseases and disorders of the cornea may lead to blindness, and cornea transplantation has been an effective treatment in this regard. However, lack of cornea throughout the world makes this treatment difficult. Therefore, the first goal of the present study is to make a chitosan/gelatin hyaline film with NHS and EDC crosslinkers for transplanting the epithelial cells of the cornea. Two solutions of gelatin and chitosan were mixed homogeneously before crosslinking in ratios of 20/80, 30/70, 40/60, and 50/50 (Gel/Chi). After 24 hours, they were put in an oven to dry, then EDC and NHS were added to the mixture as crosslinker. Corneal epithelial cell morphology was assessed qualitatively... 

    Microfluidic-based droplets for advanced regenerative medicine: current challenges and future trends

    , Article Biosensors ; Volume 12, Issue 1 , 2022 ; 20796374 (ISSN) Nazari, H ; Heirani Tabasi, A ; Ghorbani, S ; Eyni, H ; Razavi Bazaz, S ; Khayati, M ; Gheidari, F ; Moradpour, K ; Kehtari, M ; Ahmadi Tafti, S.M ; Ahmadi Tafti, S. H ; Warkiani, M. E ; Sharif University of Technology
    MDPI  2022
    Abstract
    Microfluidics is a promising approach for the facile and large-scale fabrication of monodispersed droplets for various applications in biomedicine. This technology has demonstrated great potential to address the limitations of regenerative medicine. Microfluidics provides safe, accurate, reliable, and cost-effective methods for encapsulating different stem cells, gametes, biomaterials, biomolecules, reagents, genes, and nanoparticles inside picoliter-sized droplets or droplet-derived microgels for different applications. Moreover, microenvironments made using such droplets can mimic niches of stem cells for cell therapy purposes, simulate native extracellular matrix (ECM) for tissue... 

    Synthesis of new hybrid nanomaterials: Promising systems for cancer therapy

    , Article Nanomedicine: Nanotechnology, Biology, and Medicine ; Volume 7, Issue 6 , 2011 , Pages 806-817 ; 15499634 (ISSN) Adeli, M ; Kalantari, M ; Parsamanesh, M ; Sadeghi, E ; Mahmoudi, M ; Sharif University of Technology
    2011
    Abstract
    Polyrotaxanes consisting of cyclodextrin rings, polyethylene glycol axes and quantum dot (QD) stoppers were synthesized and characterized. The molecular self-assembly of polyrotaxanes led to spindlelike nano-objects whose shape, size and position were dominated by QD stoppers. Due to their well-defined molecular self-assemblies, carbohydrate backbone, high functionality and several types of functional groups together with the high luminescence yield, synthesized hybrid nanostructures were recognized as promising candidates for biomedical applications. The potential applications of the molecular self-assemblies as drug-delivery systems was investigated by conjugation of doxorubicin (DOX) to... 

    Near infrared laser stimulation of human neural stem cells into neurons on graphene nanomesh semiconductors

    , Article Colloids and Surfaces B: Biointerfaces ; Volume 126 , 2015 , Pages 313-321 ; 09277765 (ISSN) Akhavan, O ; Ghaderi, E ; Shirazian, S. A ; Sharif University of Technology
    Abstract
    Reduced graphene oxide nanomeshes (rGONMs), as p-type semiconductors with band-gap energy of ~1. eV, were developed and applied in near infrared (NIR) laser stimulation of human neural stem cells (hNSCs) into neurons. The biocompatibility of the rGONMs in growth of hNSCs was found similar to that of the graphene oxide (GO) sheets. Proliferation of the hNSCs on the GONMs was assigned to the excess oxygen functional groups formed on edge defects of the GONMs, resulting in superhydrophilicity of the surface. Under NIR laser stimulation, the graphene layers (especially the rGONMs) exhibited significant cell differentiations, including more elongations of the cells and higher differentiation of... 

    Design of experiment, preparation, and in vitro biological assessment of human amniotic membrane extract loaded nanoparticles

    , Article Current Pharmaceutical Biotechnology ; Volume 21, Issue 3 , 2020 , Pages 256-267 Shabani, A ; Atyabi, F ; Khoshayand, M. R ; Mahbod, R ; Cohan, R. A ; Akbarzadeh, I ; Bakhshandeh, H ; Sharif University of Technology
    Bentham Science Publishers  2020
    Abstract
    Background: Human amniotic membrane grafting could be potentially useful in ocular surface complications due to tissue similarity and the presence of factors that reduce inflammation, vascu-larization, and scarring. However, considerations like donor-derived infectious risk and the requirement of an invasive surgery limit the clinical application of such treatments. Moreover, the quick depletion of bioactive factors after grafting reduces the efficacy of treatments. Therefore, in the current study, the possibility of nano delivery of the bioactive factors extracted from the human amniotic membrane to the ocular surface was investigated. Materials and Methods: Nanoparticles were prepared... 

    A lupane triterpenoid and other constituents of Salvia eremophila

    , Article Natural Product Research ; Volume 26, Issue 21 , 2012 , Pages 2045-2049 ; 14786419 (ISSN) Farimani, M. M ; Moghaddam, F. M ; Esmaeili, M. A ; Amin, G ; Sharif University of Technology
    2012
    Abstract
    Phytochemical investigation of the aerial parts of Salvia eremophila led to the isolation of a lupane triterpenoid, 3β, 20-dihydroxylupane-28-oic acid (1), together with eight other compounds, comprising three diterpene, two triterpene, two flavonoids and a steroidal glucoside. Their structures were elucidated by interpretation of their one-dimensional and two-dimensional NMR spectra and completed by the analysis of the HRESIMS data. Compounds 1, 2-4 and 8 were evaluated for their cytotoxicities against five human tumour cell lines. Compounds 1 and 3 hold a good potential for use in future studies due to their anti-cancer properties