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    Chemometrics-assisted effect-directed analysis of crude and refined oil using comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry

    , Article Environmental Science and Technology ; Vol. 48, issue. 5 , 2014 , pp. 3074-3083 ; ISSN: 0013936X Radovic, J. R ; Thomas, K. V ; Parastar, H ; Diez, S ; Tauler, R ; Bayona, J. M ; Sharif University of Technology
    Abstract
    An effect-directed analysis (EDA) of fresh and artificially weathered (evaporated, photooxidized) samples of North Sea crude oil and residual heavy fuel oil is presented. Aliphatic, aromatic, and polar oil fractions were tested for the presence of aryl hydrocarbon receptor (AhR) agonist and androgen receptor (AR) antagonist, demonstrating for the first time the AR antagonist effects in the aromatic and, to a lesser extent, polar fractions. An extension of the typical EDA strategy to include an N-way partial least-squares (N-PLS) model capable of relating the comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry (GC × GC-TOFMS) data set to the bioassay data... 

    Chemometric-based determination of polycyclic aromatic hydrocarbons in aqueous samples using ultrasound-assisted emulsification microextraction combined to gas chromatography-mass spectrometry

    , Article Journal of Chromatography A ; Volume 1413 , September , 2015 , Pages 117-126 ; 00219673 (ISSN) Ahmadvand, M ; Sereshti, H ; Parastar, H ; Sharif University of Technology
    Elsevier  2015
    Abstract
    In the present research, ultrasonic-assisted emulsification-microextraction (USAEME) coupled with gas chromatography-mass spectrometry (GC-MS) has been proposed for analysis of thirteen environmental protection agency (EPA) polycyclic aromatic hydrocarbons (PAHs) in aqueous samples. Tetrachloroethylene was selected as extraction solvent. The main parameters of USAEME affecting the efficiency of the method were modeled and optimized using a central composite design (CCD). Under the optimum conditions (9 μL for extraction solvent, 1.15% (w/v) NaCl (salt concentration) and 10min for ultrasonication time), preconcentration factor (PF) of the PAHs was in the range of 500-950. In order to have a... 

    Optimization of dispersive liquid-liquid microextraction and improvement of detection limit of methyl tert-butyl ether in water with the aid of chemometrics

    , Article Journal of Chromatography A ; Volume 1217, Issue 45 , November , 2010 , Pages 7017-7023 ; 00219673 (ISSN) Karimi, M ; Sereshti, H ; Samadi, S ; Parastar, H ; Sharif University of Technology
    2010
    Abstract
    Dispersive liquid-liquid microextraction (DLLME) coupled with gas chromatography-mass spectrometry-selective ion monitoring (GC-MS-SIM) was applied to the determination of methyl tert-butyl ether (MTBE) in water samples. The effect of main parameters affecting the extraction efficiency was studied simultaneously. From selected parameters, volume of extraction solvent, volume of dispersive solvent, and salt concentration were optimized by means of experimental design. The statistical parameters of the derived model were R 2=0.9987 and F=17.83. The optimal conditions were 42.0μL for extraction solvent, 0.30mL for disperser solvent and 5% (w/v) for sodium chloride. The calibration linear range... 

    Geochemical characteristics of rare earth elements in different types of soil: a chemometric approach

    , Article Chemosphere ; Volume 184 , 2017 , Pages 673-678 ; 00456535 (ISSN) Khan, A. M ; Behkami, S ; Yusoff, I ; Md Zain, S. B ; Bakar, N. K. A ; Bakar, A. F. A ; Alias, Y ; Sharif University of Technology
    Abstract
    Rare earth elements (REEs) are becoming significant due to their huge applications in many industries, large-scale mining and refining activities. Increasing usage of such metals pose negative environmental impacts. In this research ICP-MS has been used to analyze soil samples collected from former ex-mining areas in the depths of 0–20 cm, 21–40 cm, and 41–60 cm of residential, mining, natural, and industrial areas of Perak. Principal component analysis (PCA) revealed that soil samples taken from different mining, industrial, residential, and natural areas are separated into four clusters. It was observed that REEs were abundant in most of the samples from mining areas. Concentration of the... 

    Gas chromatographic fingerprint analysis of secondary metabolites of Stachys lanata (Stachys byzantine C. Koch) combined with antioxidant activity modelling using multivariate chemometric methods

    , Article Journal of Chromatography A ; Volume 1602 , 2019 , Pages 432-440 ; 00219673 (ISSN) Aminfar, P ; Abtahi, M ; Parastar, H ; Sharif University of Technology
    Elsevier B.V  2019
    Abstract
    S. lanata has been traditionally used as a medicinal plant due to its various biological activities such as antioxidant activity. Therefore, identification and quality control studies of this plant are of great importance. To this end, gas chromatography (GC) combined with chemometrics was proposed for fingerprint analysis of S. lanata samples. This study sought to classify GC fingerprints of twenty-eight S. lanata samples from eight different regions of Iran and more importantly, to correlate fingerprints to the antioxidant activity to select S. lanata volatile antioxidant markers. S. lanata samples were classified into five and three classes using partial least squares-discriminant... 

    Classification, Similarity Analysis and Modeling of Drug Activities Using Chemometric Techniques: Introduction of Classical Relativity in Chemical Space

    , Ph.D. Dissertation Sharif University of Technology Mani-Varnosfaderani, Ahmad (Author) ; Jalali-Heravi, Mehdi (Supervisor)
    Abstract
    The present research devoted to the application, development and implementation of clustering, classification and regression techniques for modeling of the biological activity of different drug and drug-like molecules. At first, the prediction ability of Bayesian regression techniques was evaluated for describing and predicting the inhibition behavior of Integrin antagonists. As a next step, the complementary local search techniques have been used for improving the performances of Bayesian regularized genetic neural network (BRGNN) algorithm. The results indicated that the pattern search algorithm has a great potential to be used as a feature selection method in Chemoinformatics. In line... 

    Modification of Evolving Factor Analysis and Multivariate Curve Resolution Methods and Using their Applications in Analysis of Medicinal Plants Essential Oils

    , Ph.D. Dissertation Sharif University of Technology Moazeni-Pourasil, Roudabeh (Author) ; Jalali-Heravi, Mehdi (Supervisor) ; Ghassempour, Alireza (Co-Advisor)
    Abstract
    Factor analysis based methods are one of the applied methods in the Chemometrics. In this regard, some modifications on one of the factor analysis based method named fixed size moving window evolving factor analysis were done and two new methods named variable size moving window evolving factor analysis and preselected variable size moving window evolving factor analysis were introduced. The performance of the new introduced methods were examined and compared by the fixed size moving window evolving factor analysis.
    Pure variable selection methods are useful for curve resolution methods which need to define an initial estimate from chromatographic profile or spectra. In this aspect the... 

    The Use of Enhanced Chemometric Methods in QSAR and Pattern Recognition Studies

    , Ph.D. Dissertation Sharif University of Technology Asadollahi Babol, Mohammad (Author) ; Jalali Heravi, Mehdi (Supervisor)
    Abstract
    Chemometrics is an interdisciplinary subject which has many applications among science and industrial process. Environmental chemist, Food chemist, biologist and so on depend on good analytical chemistry measurement and so need chemometrics to interpret their data. In this project, we have developed different chemometrics and machine learning methods for considering the quantitative structure-activity relationship between different drug-like molecules. Also some chemometrics techniques were applied for the pattern recognition of NIR data on human plasma for discriminating between healthy and infected HIV-1 patients. At first, Quantitative structure-activity relationship (QSAR) models for... 

    Development and Application of Chemometric Methods for Hyperspectral Image Analysis for Authentication and Adulteration Detection in Food (Saffron and Turmeric)

    , Ph.D. Dissertation Sharif University of Technology Hashemi Nasab, Fatemeh Sadat (Author) ; Parastar Shahri, Hadi (Supervisor) ; Abdollahi, Hamid (Supervisor)
    Abstract
    The use of hyperspectral images to detect food fraud has become popular and it is necessary to develop chemometrics methods for analyzing the data from these images. Additionally, food authenticity has become a major challenge, and the focus of this thesis is on developing multivariate methods in chemometrics to extract useful information from data obtained from food authenticity verification using hyperspectral imaging (HSI). This thesis consists of six chapters. In the first chapter, a brief introduction to the fundamentals of hyperspectral imaging and food authenticity verification is presented. In the second chapter, the data structure of these images and chemometric methods including... 

    Development and Application of Miniaturized Nearinfrared Spectroscopy Coupled with Multivariate Classification Techniques for Food Authenticity

    , Ph.D. Dissertation Sharif University of Technology Ehsani, Samaneh (Author) ; Parastar Shahri, Hadi (Supervisor) ; Yazdanpanah, Hassan (Co-Supervisor)
    Abstract
    The need to measure the authenticity of food has always been an important concern of many countries. Since food fraud can cause serious problems, every year, much research is conducted in the field of food authenticity all over the world. Milk among dairy products and orange juice among fruit juices are two categories of widely consumed beverages all over the world, therefore they are exposed to various frauds from the manufacturers. Frauds such as adding water to milk and preservatives such as hydrogen peroxide, formaldehyde, and sodium hypochlorite are common frauds that are added to milk to increase its volume and storage time. Among the common cases of adulteration in orange juice, we... 

    Metabonomics exposes metabolic biomarkers of Crohn's disease by 1HNMR

    , Article Gastroenterology and Hepatology from Bed to Bench ; Volume 6, Issue SUPPL , 2013 , Pages S19-S22 ; 2008-4234 (EISSN) Fathi, F ; Ektefa, F ; Hagh-Azali, M ; Aghdaie, H. A ; Sharif University of Technology
    2013
    Abstract
    Metabonomics and other "omic" fields are essential science in analytical chemistry. Modern analytical instruments such as proton nuclear magnetic resonance (1H-NMR) can provide the great quantity of analytical information. In order to assign unknown samples, chemometric methods recognition build classification model based on experimental data. Firstly, some current strategies regarding disease diagnosis are exhibited in metabonomic studies. Some diseases such as crohn's disease can be difficult to diagnose since its signs and symptoms may be similar to other medical problems or often mimic other symptoms. Applications of NMR and supervised pattern recognition in the field of metabonomics are... 

    Recent trends in application of multivariate curve resolution approaches for improving gas chromatography-mass spectrometry analysis of essential oils

    , Article Talanta ; Volume 85, Issue 2 , 2011 , Pages 835-849 ; 00399140 (ISSN) Jalali Heravi, M ; Parastar, H ; Sharif University of Technology
    2011
    Abstract
    Essential oils (EOs) are valuable natural products that are popular nowadays in the world due to their effects on the health conditions of human beings and their role in preventing and curing diseases. In addition, EOs have a broad range of applications in foods, perfumes, cosmetics and human nutrition. Among different techniques for analysis of EOs, gas chromatography-mass spectrometry (GC-MS) is the most important one in recent years. However, there are some fundamental problems in GC-MS analysis including baseline drift, spectral background, noise, low S/N (signal to noise) ratio, changes in the peak shapes and co-elution. Multivariate curve resolution (MCR) approaches cope with ongoing... 

    MVC app: A smartphone application for performing chemometric methods

    , Article Chemometrics and Intelligent Laboratory Systems ; Volume 147 , October , 2015 , Pages 105-110 ; 01697439 (ISSN) Parastar, H ; Shaye, H ; Sharif University of Technology
    Elsevier  2015
    Abstract
    In this work, a novel smartphone application entitled ". MVC app" is developed to perform different multivariate calibration methods. This app is designed for chemists who are not expert in programming or in advanced statistics. The developed application can use any Android-powered device as an environment for running. It is an easy to use app which can simply install in your smartphone and play. Different multivariate calibration methods, such as multiple linear regression (MLR), principal component regression (PCR) and partial least squares (PLS) are included in this app. As an instance, for performing PLS modeling, first calibration and validation data sets are imported (via USB or... 

    Analysis of bioactive constituents of saffron using ultrasonic assisted emulsification microextraction combined with high-performance liquid chromatography with diode array detector: A chemometric study

    , Article RSC Advances ; Volume 5, Issue 33 , 2015 , Pages 26246-26254 ; 20462069 (ISSN) Chaharlangi, M ; Parastar, H ; Malekpour, A ; Sharif University of Technology
    Royal Society of Chemistry  2015
    Abstract
    In recent years, there has been an increasing interest in the analysis of the major active components of saffron owing to their significant role in various industries, such as food, medicine and perfume. In other words, analysis of the major active components of saffron can give complete information about its chemical composition, which can be used as a reliable index for the quality control of different saffron samples (i.e., natural and commercial). The aim of the present work was to develop a simple, low cost, efficient and comprehensive strategy for the extraction and analysis of the bioactive components of saffron. In this regard, ultrasonic-assisted solvent extraction (UASE) combined... 

    Chemiluminometric fingerprints for identification of plasmonic nanoparticles

    , Article Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy ; Volume 209 , 2019 , Pages 85-94 ; 13861425 (ISSN) Shahrajabian, M ; Hormozi Nezhad, M. R ; Sharif University of Technology
    Elsevier B.V  2019
    Abstract
    Development of a convenient and inexpensive method for identification and detection of nanoparticles (NPs) is of great interest. In this work, we have developed a novel and simple chemiluminescence based sensor array, with its sensing mechanism mimicking that of olfactory and gustatory systems for discriminating a set of NPs. The proposed method is based on the enhancement effect of NPs on luminol–oxidant CL intensity by their catalytic effect. Three kinds of oxidant including H2O2, AgNO3, and K3Fe(CN)6 were used as sensor elements and NPs exhibited diverse enhancing responses to different oxidant-luminol CL systems producing unique response patterns that were identified through heat map and... 

    Investigating the shape evolution mechanism of CdSe quantum dots by chemometrics analysis of spectrophotometry data

    , Article Journal of Physical Chemistry C ; Volume 112, Issue 47 , 2008 , Pages 18321-18324 ; 19327447 (ISSN) Hemmateenejad, B ; Hormozi Nezhad, M. R ; Sharif University of Technology
    2008
    Abstract
    The study on the mechanism of the shape evolution of nanocrystaline particles is an important and emerging field, which is applicable in the shaped control synthesis of nanoparticles. As an alternative to transmittance electron microscopy (TEM), which is already used in the study of nanoparticles, in this article a simple spectrophotometric method has been proposed utilizing the advantages of chemometrics methods in analyzing overlapped and complex spectral data. The evolutionary visible absorbance data of CdSe quantum dots through particle formation were analyzed by factor analysis, evolving factor analysis, and multivariate curve resolution-alternative least-squares analysis, by which four... 

    Optimization of solid-phase microextraction of volatile phenols in water by a polyaniline-coated Pt-fiber using experimental design

    , Article Analytica Chimica Acta ; Volume 581, Issue 1 , 2007 , Pages 71-77 ; 00032670 (ISSN) Mousavi, M ; Noroozian, E ; Jalali Heravi, M ; Mollahosseini, A ; Sharif University of Technology
    2007
    Abstract
    Solid-phase microextraction (SPME) coupled to gas chromatography (GC) was applied to the extraction of phenol and some of its volatile derivatives in water samples. The SPME fiber consisted of a thin layer of polyaniline, which was electrochemically coated on a fine Pt wire. The stability of the coating was such that it could be used at temperatures as high as 325 °C, without any deterioration. The effects of various parameters affecting the extraction efficiency were studied, simultaneously. From these, optimization of the extraction temperature, extraction time, coating thickness, sample pH, salt concentration and desorption time was carried out by means of a (26-2) fractional factorial... 

    Deep learning in analytical chemistry

    , Article TrAC - Trends in Analytical Chemistry ; Volume 145 , 2021 ; 01659936 (ISSN) Debus, B ; Parastar, H ; Harrington, P ; Kirsanov, D ; Sharif University of Technology
    Elsevier B.V  2021
    Abstract
    In recent years, extensive research in the field of Deep Learning (DL) has led to the development of a wide array of machine learning algorithms dedicated to solving complex tasks such as image classification or speech recognition. Due to their unprecedented ability to explore large volumes of data and extract meaningful hidden structures, DL models have naturally drawn attention from various fields in science. Analytical chemistry, in particular, has successfully benefited from the application of DL tools for extracting qualitative and quantitative information from high-dimensional and complex chemical measurements. This report provides introductory reading for understanding DL machinery... 

    External parameter orthogonalization-support vector machine for processing of attenuated total reflectance-mid-infrared spectra: A solution for saffron authenticity problem

    , Article Analytica Chimica Acta ; Volume 1154 , 2021 ; 00032670 (ISSN) Amirvaresi, A ; Parastar, H ; Sharif University of Technology
    Elsevier B.V  2021
    Abstract
    In the present work, a new approach based on external parameter orthogonalization combined with support vector machine (EPO-SVM) is proposed for processing of attenuated total reflectance-Fourier transform mid-infrared (ATR-FT-MIR) spectra with the goal of solving authentication problem in saffron, the most expensive spice in the world. First, one-hundred authentic saffron samples are clustered by principal component analysis (PCA) with EPO as the best preprocessing strategy. Then, EPO-SVM is used for the detection of four commonly used plant-derived adulterants (i.e. safflower, calendula, rubia, and style) in binary mixtures (saffron and each of plant adulterants) and its performance is... 

    Chemometrics comparison of gas chromatography with mass spectrometry and comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry Daphnia magna metabolic profiles exposed to salinity

    , Article Journal of Separation Science ; Volume 41, Issue 11 , 2018 , Pages 2368-2379 ; 16159306 (ISSN) Parastar, H ; Garreta Lara, E ; Campos, B ; Barata, C ; Lacorte, S ; Tauler, R ; Sharif University of Technology
    Wiley-VCH Verlag  2018
    Abstract
    The performances of gas chromatography with mass spectrometry and of comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry are examined through the comparison of Daphnia magna metabolic profiles. Gas chromatography with mass spectrometry and comprehensive two-dimensional gas chromatography with mass spectrometry were used to compare the concentration changes of metabolites under saline conditions. In this regard, a chemometric strategy based on wavelet compression and multivariate curve resolution–alternating least squares is used to compare the performances of gas chromatography with mass spectrometry and comprehensive two-dimensional gas chromatography with...