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    Comparison of mouse embryo deformation modeling under needle injection using analytical Jacobian, nonlinear least square and artificial neural network techniques

    , Article Scientia Iranica ; Volume 18, Issue 6 , 2011 , Pages 1486-1491 ; 10263098 (ISSN) Abbasi, A. A ; Ahmadian, M. T ; Vossoughi, G. R ; Sharif University of Technology
    Abstract
    Analytical Jacobian, nonlinear least square and three layer artificial neural network models are employed to predict deformation of mouse embryos under needle injection, based on experimental data captured from literature. The Maximum Absolute Error (MAE), coefficient of determination ( R2), Relative Error of Prediction (REP), Root Mean Square Error of Prediction (RMSEP), NashSutcliffe coefficient of efficiency ( Ef) and accuracy factor ( Af) are used as the basis for comparison of these three models. Analytical Jacobian, nonlinear least square and ANN models have yielded the correlation coefficient of 0.9985, 0.9964 and 0.9998, respectively. The REP between the models predicted values and... 

    A well-dispersed Pt/Ni/TiO 2 nanotubes modified electrode as an amperometric non-enzymatic glucose biosensor

    , Article Sensor Letters ; Volume 9, Issue 5 , October , 2011 , Pages 1598-1605 ; 1546198X (ISSN) Mahshid, S. S ; Luo, S ; Yang, L ; Mahshid, S ; Dolati, A ; Ghorbani, M ; Cai, Q ; Sharif University of Technology
    2011
    Abstract
    In this study a novel Pt/Ni nanostructure consisting of nano-bushes and nanocubes was fabricated onto TiO 2 nanotubes. The scanning electron microscopy images showed that a large amount of well-dispersed nano-architectures had uniformly covered all over the surface which made an electrode with high surface area. It was obviously seen that the nanocube structures mainly consists of Ni had been grown on top of each other while the Pt colonies represented bush-like structures. As a non-enzymatic glucose biosensor, the Pt/Ni TiO 2 nanotubes modified electrode exhibited an excellent performance. The proposed biosensor had two linear ranges for detection of glucose from 0 to 0.12 mM (correlation... 

    Prediction of standard enthalpy of combustion of pure compounds using a very accurate group-contribution-based method

    , Article Energy and Fuels ; Volume 25, Issue 6 , April , 2011 , Pages 2651-2654 ; 08870624 (ISSN) Gharagheizi, F ; Mirkhani, S. A ; Tofangchi Mahyari, A. R ; Sharif University of Technology
    2011
    Abstract
    The artificial neural network-group contribution (ANN-GC) method is applied to estimate the standard enthalpy of combustion of pure chemical compounds. A total of 4590 pure compounds from various chemical families are investigated to propose a comprehensive and predictive model. The obtained results show the squared correlation coefficient (R 2) of 0.999 99, root mean square error of 12.57 kJ/mol, and average absolute deviation lower than 0.16% for the estimated properties from existing experimental values  

    Prediction of absolute entropy of ideal gas at 298 K of pure chemicals through GAMLR and FFNN

    , Article Energy Conversion and Management ; Volume 52, Issue 1 , 2011 , Pages 630-634 ; 01968904 (ISSN) Fazeli, A ; Bagheri, M ; Ghaniyari-Benis, S ; Aslebagh, R ; Kamaloo, E ; Sharif University of Technology
    2011
    Abstract
    Thermodynamical optimization for energy conversion system can be performed by decreasing entropy generation. For calculation of entropy, we need to know entropy of ideal gases at 298 K as a reference point. Entropy is a thermodynamic quantity which is not easily measured and prediction of entropy by molecular structures for new designed molecules may be a challenge. An easy and accurate equation for prediction of absolute entropy of pure ideal gas at 298 K was introduced for the first time based on the quantitative structure property relationship (QSPR) approach. Thousand seven hundred pure chemical compounds and 3224 molecular descriptors were used for finding this easy equation by genetic... 

    Is there a reliable and invariant set of muscle synergy during isometric biaxial trunk exertion in the sagittal and transverse planes by healthy subjects?

    , Article Journal of Biomechanics ; Volume 48, Issue 12 , Sep , 2015 , Pages 3234-3241 ; 00219290 (ISSN) Sedaghat Nejad, E ; Mousavi, S. J ; Hadizadeh, M ; Narimani, R ; Khalaf, K ; Campbell Kyureghyan, N ; Parnianpour, M ; Sharif University of Technology
    Elsevier Ltd  2015
    Abstract
    It has been suggested that the central nervous system simplifies muscle control through basic units, called synergies. In this study, we have developed a novel target-matching protocol and used non-negative matrix factorization (NMF) technique to extract trunk muscle synergies and corresponding torque synergies. Isometric torque data at the L5/S1 level and electromyographic patterns of twelve abdominal and back muscles from twelve healthy participants (five females) were simultaneously recorded. Each participant performed a total number of 24 isometric target-matching tasks using 12 different angular directions and 2 levels of uniaxial and biaxial exertions. Within- and between-subject... 

    Test-retest reliability of Kinect's measurements for the evaluation of upper body recovery of stroke patients

    , Article BioMedical Engineering Online ; Volume 14, Issue 1 , 2015 ; 1475925X (ISSN) Mobini, A ; Behzadipour, S ; Saadat, M ; Sharif University of Technology
    BioMed Central Ltd  2015
    Abstract
    Background: Performance indices provide quantitative measures for the quality of motion, and therefore, assist in analyzing and monitoring patients' progress. Measurement of performance indices requires costly devices, such as motion capture systems. Recent developments of sensors for game controllers, such as Microsoft Kinect, have motivated many researchers to develop affordable systems for performance measurement applicable to home and clinical care. In this work, the capability of Kinect in finding motion performance indices was assessed by analyzing intra-session and inter-session test-retest reliability. Method: Eighteen stroke patients and twelve healthy subjects participated in this... 

    The effects of movement speed on kinematic variability and dynamic stability of the trunk in healthy individuals and low back pain patients

    , Article Clinical Biomechanics ; Volume 30, Issue 7 , Aug , 2015 , Pages 682-688 ; 02680033 (ISSN) Asgari, M ; Sanjari, M. A ; Mokhtarinia, H. R ; Moeini Sedeh, S ; Khalaf, K ; Parnianpour, M ; Sharif University of Technology
    Elsevier Ltd  2015
    Abstract
    Background: Comparison of the kinematic variability and dynamic stability of the trunk between healthy and low back pain patient groups can contribute to gaining valuable information about the movement patterns and neuromotor strategies involved in various movement tasks. Methods: Fourteen chronic low back pain patients with mild symptoms and twelve healthy male volunteers performed repeated trunk flexion-extension movements in the sagittal plane at three different speeds: 20 cycles/min, self-selected, and 40 cycles/min. Mean standard deviations, coefficient of variation and variance ratio as variability measures; maximum finite-time Lyapunov exponents and maximum Floquet multipliers as... 

    Structural image representation for image registration

    , Article 2015 International Symposium on Artificial Intelligence and Signal Processing, AISP 2015, 3 March 2015 through 5 March 2015 ; March , 2015 , Pages 95-100 ; 9781479988174 (ISBN) Aghajani, K ; Shirpour, M ; Manzuri, M. T ; Sharif University of Technology
    Institute of Electrical and Electronics Engineers Inc  2015
    Abstract
    Image registration is an important task in medical image processing. Assuming spatially stationary intensity relation among images, conventional area based algorithms such as CC (Correlation Coefficients) and MI (Mutual Information), show weaker results alongside spatially varying intensity distortion. In this research, a structural representation of images is introduced. It allows us to use simpler similarity metrics in multimodal images which are also robust against the mentioned distortion field. The efficiency of this presentation in non-rigid image registration in the presence of spatial varying distortion field is examined. Experimental results on synthetic and real-world data sets... 

    Design and evaluation of a novel triaxial isometric trunk muscle strength measurement system

    , Article Proceedings of the Institution of Mechanical Engineers, Part H: Journal of Engineering in Medicine ; Volume 223, Issue 6 , 2015 , Pages 755-766 ; 09544119 (ISSN) Azghani, M. R ; Farahmand, F ; Meghdari, A ; Vossoughi, G ; Parnianpour, M ; Sharif University of Technology
    SAGE Publications Ltd  2015
    Abstract
    Maximal strength measurements of the trunk have been used to evaluate the maximum functional capacity of muscles and the potential mechanical overload or overuse of the lumbar spine tissues in order to estimate the risk of developing musculoskeletal injuries. A new triaxial isometric trunk strength measurement system was designed and developed in the present study, and its reliability and performance was investigated. The system consisted of three main revolute joints, equipped with torque sensors, which intersect at L5 - S1 and adjustment facilities to fit the body anthropometry and to accommodate both symmetric and asymmetric postures in both seated and standing positions. The dynamics of... 

    Test-retest reliability of postural stability measures during quiet standing in patients with a history of nonspecific low back pain

    , Article Biomedical Engineering - Applications, Basis and Communications ; Volume 22, Issue 3 , 2010 , Pages 255-262 ; 10162372 (ISSN) Mazaheri, M ; Salavati, M ; Negahban, H ; Parnianpour, M ; Sharif University of Technology
    2010
    Abstract
    As balance is the foundation for all voluntary motor skills, considerable research has been conducted to evaluate postural control in patients with low back pain (LBP). Although reliability is a population-specific property, to the authors' knowledge, there has been no study to determine the test-retest reliability of the center of pressure (COP) measures in the general population of LBP patients. As many as 11 patients with a history of nonspecific LBP randomly completed postural measurements with three levels of difficulty (rigid surface-eyes open, rigid surface-eyes closed, and foam surface-eyes closed) in two sessions. The COP data were used to calculate standard deviation of amplitude,... 

    Reliability and validity of the Persian version of Foot and Ankle Ability Measure (FAAM) to measure functional limitations in patients with foot and ankle disorders

    , Article Osteoarthritis and Cartilage ; Volume 18, Issue 6 , 2010 , Pages 755-759 ; 10634584 (ISSN) Mazaheri, M ; Salavati, M ; Negahban, H ; Sohani, S. M ; Taghizadeh, F ; Feizi, A ; Karimi, A ; Parnianpour, M ; Sharif University of Technology
    2010
    Abstract
    Objective: To translate the Foot and Ankle Ability Measure (FAAM) into Persian and to evaluate the psychometric properties of the Persian version of FAAM. Methods: 93 patients with a range of foot and ankle disorders, completed the Persian version of the FAAM and Short-Form 36 Health Survey (SF-36) in the test session. With an interval of 2-6 days, 60 patients filled out the FAAM in the retest session. The FAAM is composed of two subscales including activities of daily living (ADL) and SPORTS. Internal consistency was assessed using Cronbach's alpha, test-retest reliability using intraclass correlation coefficient (ICC) and standard error of measurement (s.e.m.), item internal consistency... 

    Membrane interactions control residue fluctuations of outer membrane porins

    , Article Physical Review E - Statistical, Nonlinear, and Soft Matter Physics ; Volume 81, Issue 5 , May , 2010 ; 15393755 (ISSN) Besya, A. B ; Mobasheri, H ; Ejtehadi, M. R ; Sharif University of Technology
    2010
    Abstract
    Bacterial outer membrane porins (Omp) that have robust β -barrel structures, show potential applications for nanomedicine devices in synthetic membranes and single molecule detection biosensors. Here, we explore the conformational dynamics of a set of 22 outer membrane porins, classified into five major groups: general porins, specific porins, transport Omps, poreless Omps and composed pores. Normal mode analysis, based on mechanical vibration theory and elastic network model, is performed to study the fluctuations of residues of aforementioned porins around their equilibrium positions. We find that a simple modification in this model considering weak interaction between protein and... 

    Effects of structural configuration on vibration control of smart laminated beams under random excitations

    , Article Journal of Mechanical Science and Technology ; Volume 24, Issue 5 , 2010 , Pages 1119-1125 ; 1738494X (ISSN) Zabihollah, A ; Sharif University of Technology
    Abstract
    The influence of structural configuration on vibration responses of smart laminated beams under random loading is studied. The effect of laminate configurations and locations of sensors/actuators in the smart system is also investigated. The layer-wise approximation for displacement and electric potential is utilized to construct the finite element model. The closed-loop control response is determined through an optimal control algorithm based on the Linear Quadratic Regulator (LQR). The correlation coefficient between the input random force and the applied actuating voltage for various configurations is also computed. It is revealed that for softer configurations, the correlation... 

    Reliability and validity of the Foot and Ankle Outcome Score: A validation study from Iran

    , Article Clinical Rheumatology ; Volume 29, Issue 5 , 2010 , Pages 479-486 ; 07703198 (ISSN) Negahban, H ; Mazaheri, M ; Salavati, M ; Sohani, S. M ; Askari, M ; Fanian, H ; Parnianpour, M ; Sharif University of Technology
    2010
    Abstract
    The aims of this study were to culturally adapt and validate the Persian version of Foot and Ankle Outcome Score (FAOS) and present data on its psychometric properties for patients with different foot and ankle problems. The Persian version of FAOS was developed after a standard forward-backward translation and cultural adaptation process. The sample included 93 patients with foot and ankle disorders who were asked to complete two questionnaires: FAOS and Short-Form 36 Health Survey (SF-36). To determine test-retest reliability, 60 randomly chosen patients completed the FAOS again 2 to 6 days after the first administration. Test-retest reliability and internal consistency were assessed using... 

    Prediction of CO2-oil molecular diffusion using adaptive neuro-fuzzy inference system and particle swarm optimization technique

    , Article Fuel ; Volume 181 , 2016 , Pages 178-187 ; 00162361 (ISSN) Ejraei Bakyani, A. R ; Sahebi, H ; Ghiasi, M. M ; Mirjordavi, N ; Esmaeilzadeh, F ; Lee, M ; Bahadori, A ; Sharif University of Technology
    Elsevier Ltd 
    Abstract
    The quantification of carbon dioxide (CO2) dissolution in oil is crucial in predicting the potential and long-term behavior of CO2 in reservoir during secondary and tertiary oil recovery. Accurate predicting carbon dioxide molecular diffusion coefficient is a key parameter during carbon dioxide injection into oil reservoirs. In this study a new model based on adaptive neuro-fuzzy inference systems (ANFIS) is designed and developed for accurate prediction of carbon dioxide diffusivity in oils at elevated temperature and pressures. Particle Swarm Optimization (PSO) as population based stochastic search algorithms was applied to obtain the optimal ANFIS model parameters. Furthermore, a simple... 

    Using self-adaptive evolutionary algorithm to improve the performance of an extreme learning machine for estimating soil temperature

    , Article Computers and Electronics in Agriculture ; Volume 124 , 2016 , Pages 150-160 ; 01681699 (ISSN) Nahvi, B ; Habibi, J ; Mohammadi, K ; Shamshirband, S ; Al Razgan, O. S ; Sharif University of Technology
    Elsevier B.V 
    Abstract
    In this study, the self-adaptive evolutionary (SaE) agent is employed to structure the contributing elements to process the management of extreme learning machine (ELM) architecture based on a logical procedure. In fact, the SaE algorithm is utilized for possibility of enhancing the performance of the ELM to estimate daily soil temperature (ST) at 6 different depths of 5, 10, 20, 30, 50 and 100 cm. In the developed SaE-ELM model, the network hidden node parameters of the ELM are optimized using SaE algorithm. The precision of the SaE-ELM is then compared with the ELM model. Daily weather data sets including minimum, maximum and average air temperatures (Tmin, Tmax and Tavg), atmospheric... 

    The highest inhibition coefficient of phenol biodegradation using an acclimated mixed culture

    , Article Water Science and Technology ; Volume 73, Issue 5 , 2016 , Pages 1033-1040 ; 02731223 (ISSN) Mohseni, M ; Sharifi Abdar, P. S ; Borghei, S. M ; Sharif University of Technology
    IWA Publishing  2016
    Abstract
    In this study a membrane biological reactor (MBR) was operated at 25±1 °C and pH = 7.5±0.5 to treat synthetic wastewater containing high phenol concentrations. Removal efficiencies of phenol and chemical oxygen demand (COD)were evaluated at four various hydraulic retention times (HRTs) of 24, 12, 8, and 4 hours. The removal rate of phenol (5.51 kg-Phenol kg-VSS-1 d-1), observed at HRT of 4 h,was the highest phenol degradation rate in the literature.According toCODtests, therewere no significant organic matter in the effluent, and phenol was degraded completely by mixed culture. Substrate inhibition was calculated from experimental growth parameters using the Haldane, Yano, and Edward... 

    A distortion outer bound for communicating correlated gaussian sources over a gaussian MAC

    , Article IEEE Communications Letters ; Volume 21, Issue 7 , 2017 , Pages 1457-1460 ; 10897798 (ISSN) Setayesh, M ; Behroozi, H ; Khalaj, B. H ; Sharif University of Technology
    Abstract
    In this letter, we consider two problems of sending a bivariate Gaussian source through a two-user Gaussian non-orthogonal multiple-access channel. We provide a new distortion outer bound for the considered joint source-channel coding problems, which significantly reduces the gap between inner and outer bounds of the distortion for correlation coefficients below a threshold. Furthermore, numerical results show, that under some conditions, our proposed outer bound matches with the inner bound obtained via the separate source-channel coding scheme, which proves the optimality of this scheme. © 1997-2012 IEEE  

    Re-construction of the shut-down PM10 monitoring stations for the reliable assessment of PM10 in Berlin using fuzzy modelling and data transformation

    , Article Environmental Monitoring and Assessment ; Volume 189, Issue 3 , 2017 ; 01676369 (ISSN) Taheri Shahraiyni, H ; Sodoudi, S ; Kerschbaumer, A ; Cubasch, U ; Sharif University of Technology
    Springer International Publishing  2017
    Abstract
    A dense monitoring network is vital for the reliable assessment of PM10 in different parts of an urban area. In this study, a new idea is employed for the re-construction of the 20 shut-down PM10 monitoring stations of Berlin. It endeavours to find the non-linear relationship between the hourly PM10 concentration of both the still operating and the shut-down PM10 monitoring stations by using a fuzzy modelling technique, called modified active learning method (MALM). In addition, the simulations were performed by using not only raw PM10 databases but also log-transformed PM10 databases for skewness reduction. According to the results of hourly PM10 simulation (root mean square error about... 

    Prediction of limiting activity coefficients for binary vapor-liquid equilibrium using neural networks

    , Article Fluid Phase Equilibria ; Volume 433 , 2017 , Pages 174-183 ; 03783812 (ISSN) Ahmadian Behrooz, H ; Bozorgmahry Boozarjomehry, R ; Sharif University of Technology
    Elsevier B.V  2017
    Abstract
    The activity coefficient at infinite dilution is a representative of the limiting non-ideality of a solute in a mixture. Various methods for the prediction of infinite dilution activity coefficients (IDACs) have been developed. Artificial neural networks are powerful mapping tools for nonlinear function approximations. Accordingly, an artificial neural network model is proposed for the prediction of the IDACs of binary systems where the properties of the individual components are used as inputs to the network. The input parameters of the neural network are the mixture temperature, critical temperature, critical pressure, critical volume, molecular weight, dipole moment and the acentric...