Sharif Digital Repository

Adsorption of a methane molecule (CH 4) onto a defected and rippled graphene sheet is studied using ab initio and molecular mechanics calculations. The optimal adsorption position and orientation of this molecule on the graphene surface (motivated by the recent realization of graphene sensors to detect individual gas molecules) is determined and the adsorption energies are calculated. In light of the density of states, we used the SIESTA code. It is found that (i) classical force field yields adsorption energy comparable with experimental result and ab initio calculation; (ii) the periodic nature of the van der Waals potential energy stored between methane and perfect sheet is altered due to... 

Density functional theory generalized gradient approximation has been used to calculate the electronic and structural properties of BaFe2As2 compound up to 56 GPa by using Quantum Espresso code. Structural properties like bulk modulus, Fe-As bond length, and As-Fe-As bond angles have been investigated by pressure especially near the tetragonal to collapsed tetragonal (T-cT) structural phase transition. This study shows considerable changes of these parameters in the cT phase, which happens near our calculated critical pressure, Pc = 24 ± 2 GPa. Electronic band structure and its orbital-resolved, total and partial density of states and Fermi surfaces have been... 

The equilibrium crystal structure and electronic structure of BaFe2-x Cox As2 (x = 0,1, 2) superconductor have been investigated by using the pseudopotential Quantum Espresso code based on the ab initio density functional theory in the generalized gradient approximation. The equilibrium crystal structure for x = 1.0 has been determined by considering five different Fe/Co configurations. This study shows that the spin calculation is essential to obtain the experimental values at x = 0.0. The total and partial density of states, band structure, and Fermi surfaces of the three compounds has been calculated. Density of states calculation indicates the important... 

First principles density functional theory (DFT)-based molecular dynamics (MD) is used to study some physical and electronic properties of amorphous silicon (a-Si) samples, as-quenched and annealed containing dangling and floating bonds (pertinent to the threefold- and fivefold-coordinated defects, respectively) as well as distorted tetrahedral bonds. Surprisingly, except for the work of Pantelides (1986) who gave a rough estimate for the effective electron correlation energy, Ueff of a floating bond on the fivefold-coordinated Si, to date, there are no theoretical studies in the literature for the calculation of Ueff pertinent to this type of defect. In this work, Ueff for each type of... 

The effects of fluorine doping on the electronic structure of LaO1−xFxFeAs superconductor have been investigated by ab initio density functional theory using pseudopotential quantum espresso code. Firstly, we have studied the role of fluorine doping on the electronic structure of LaO1−xFxFeAs by calculation of band structure, density of states, and Fermi surfaces at various doping levels x = 0.00, 0.25, and 0.50. The lattice parameters and ionic position have been determined by optimizing crystal structure. Our results show that doping decreases cell volume similar to mechanical pressure and shifts the bands and states near the Fermi level toward the lower energies. According to the Fermi... 

Phonon detector can be designed by using colloidal silver nanoparticle (Ag NP) in presence of 1-Ethyl-3-methylimidazolium Hexafluorophosphate [EMim][PF6] ionic liquid (IL) via computational technique as the first time for many and high performance biosensors applications. Density functional theory as a quantum chemistry calculation method has been used to get the potential interaction between silver metal and ionic solvent. Molecular dynamics simulation shows that in small sizes of colloidal Ag NP in [EMim][PF6], electrical effect of IL makes one main phonon peak and in big size of colloidal Ag NP, splitting of phonon density occurs with two peaks due to the lower electrical field of IL with... 

We used first principles calculations based on density functional theory with generalized gradient approximation to investigate and compare the structural, electronic and optical properties of two photoanode materials, ZnV2O6 and Zn2V2O7, for use in photocatalytic water splitting. After geometry optimization, the calculated structural parameters evince a satisfactory agreement with the reported experimental results indicating that the used method and conditions are suitable. The electronic structures demonstrate that both photocatalysts possess favorable band gaps (2.31 and 2.52 eV) and appropriate band edge positions for oxygen evolution reaction under solar radiation. The relatively light... 

We report a density functional non-equilibrium Green's function study of electrical transport in a single molecular conductor consisting of an ethane-dithiolate (C2H4S2) molecular wire with two sulfur end groups bonded to the Au(1 1 1) electrodes. We show that the current was increased by increasing the external voltage biases. The projected density of states (PDOS) and transmission coefficients T(E) under various external voltage biases are analyzed, and it suggests that the variation of the coupling between the molecule and the electrodes with external bias leads to the increase of the current. Furthermore, the investigation of the transport properties of the pentane-dithiolate (C5H10S2)... 

In this work propagation of a high frequency electromagnetic wave in underdense plasma in presence of an external magnetic field is investigated. When a constant magnetic field perpendicular to the motion of electrons is applied, then the electrons rotate around the magnetic field lines and generate electromagnetic part in the wake with a nonzero group velocity. By using of the Maxwell equations and nonlinear differential equation for the electric field a direct one-dimensional (1D) procedure for calculating hydrodynamic equations are developed and the electric and magnetic field profiles in the plasma are investigated. It is shown that by using the external (dc) magnetic field in constant...