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Styrene energetics and characterization of its conjugate base: An example of isotopic labeling gone awry
, Article International Journal of Mass Spectrometry ; Volume 413 , 2017 , Pages 163-167 ; 13873806 (ISSN) ; Lis, L ; Kass, S. R ; Sharif University of Technology
Elsevier B.V
2017
Abstract
The equilibrium acidity of styrene was measured (ΔH°acid(PhCH[dbnd]CH2) = 390.6 ± 0.5 kcal mol−1) and its deprotonation site was revised from the ortho position on the aromatic ring to the α-hydrogen atom based upon deuterium-labeling studies and extensive computations. Somewhat surprisingly, the nature of the anionic base plays a critical role in properly determining the ionization site and avoiding misleading results due to extraordinary hydrogen–deuterium exchange. Bracketing the electron affinity of α-styryl radical (PhC[rad][dbnd]CH2, 23.1 ± 3.4 kcal mol−1) enabled the α-C[sbnd]H bond dissociation energy (100.1 ± 3.4 kcal mol−1) of styrene and the effect of a phenyl substituent at an...
Selective photo-dissociative ionization of methane molecule with TDDFT study
, Article Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy ; Volume 171 , 2017 , Pages 325-329 ; 13861425 (ISSN) ; Anvari, A ; Sadighi Bonabi, R ; Sharif University of Technology
Elsevier B.V
2017
Abstract
Three dimensional calculation of control dynamics for finding the optimized laser filed is formulated using an iterative method and time-dependent density functional approach. An appropriate laser pulse is designed to control the desired products in the dissociation of methane molecule. The tailored laser pulse profile, eigenstate distributions and evolution of the efficient occupation numbers are predicted and exact energy levels of this five-atomic molecule is obtained. Dissociation rates of up to 78%, 80%, 90%, and 82% for CH2 +, CH+, C+ and C++ are achieved. Based on the present approach one can reduce the controlling costs. © 2016 Elsevier B.V
A perspective on electrostatics in gas-solid fluidized beds: challenges and future research needs
, Article Powder Technology ; Volume 329 , 2018 , Pages 65-75 ; 00325910 (ISSN) ; Bi, X. T ; Grace, J. R ; Sharif University of Technology
Elsevier B.V
2018
Abstract
This paper provides a perspective on the current knowledge and potential areas of future research related to electrostatics in fluidized beds. Aspects addressed include characterization techniques, charge generation and dissipation mechanisms, interplay between the electrostatics and hydrodynamics, charge control methods, applications of tribo-electrostatic fluidization systems, and computational simulations which account for electrostatic charges. This is a complex research field involving fluid mechanics, powders and electrical physics, with potential rewards in terms of safety, process monitoring and new applications. © 2018 Elsevier B.V
The formation and dissociation energy of vacancies in cementite: A first-principles study
, Article Nuclear Instruments and Methods in Physics Research, Section B: Beam Interactions with Materials and Atoms ; Volume 502 , 2021 , Pages 157-163 ; 0168583X (ISSN) ; Amirhossein Feghhi, S ; Samadfam, M ; Sharif University of Technology
Elsevier B.V
2021
Abstract
Because of the possibility of various types of vacancies in cementite due to its crystalline structure, the focus of this paper was only on vacancies. In this regard, the formation energies of single, two, three and four vacancies of over than 120 different cases were calculated using first-principles method. For the case of single vacancy, the results were in three values of ~1.63, 1.39 and 0.78 eV according to iron vacancies at general positions, iron vacancies located on mirror planes and carbon vacancies in the interstitial positions, respectively. The results for the case of two, three and four vacancies were between from 2.10 to 3.34 eV, from 3.92 to 5.10 eV and from 4.77 to 6.33 eV,...
Optimal control of dissociation of nitrogen molecule with intense ultra-short laser pulse shaping
, Article Journal of Molecular Structure ; Volume 1083 , March , 2015 , Pages 121-126 ; 00222860 (ISSN) ; Irani, E ; Sadighi Bonabi, R ; Sharif University of Technology
Elsevier
2015
Abstract
(GraphPresented) The quantum optimal control theory in conjunction with time dependent density functional theory is used to optimize the laser pulse shape for dissociation of nitrogen molecule. For several initial peak intensities and frequency ranges, the optimum shapes are produced and compared to determine the most efficient pulse. Ehrenfest molecular dynamics model is also used to test the dissociation process. The corresponding snapshots of density and time dependent electron localization function are presented. It is noticed that when the frequency ranges of laser pulses are doubled, it leads to 60% faster dissociation of N2 molecule
Dissociative ionization of methane in an elliptical pulse shaped laser field
, Article Journal of Molecular Structure ; Volume 1079 , January , 2015 , Pages 454-459 ; 00222860 (ISSN) ; Sadighi Bonabi, R ; Anvari, A ; Sharif University of Technology
Elsevier
2015
Abstract
The effect of strong femto-second laser pulses on the dissociation probability of methane has been investigated analytically in various arrangements. The ellipticity dependence of the dissociation probability at intensities from 1014 W cm-2 to 1016 W cm-2 for Ti:Sapphire laser is presented. A reliable calculation of the dissociation probability based on 3D time-dependent Schrodinger equation with an improved model of time-dependent density-functional theory is presented. These calculations are carried out for three different cases of elliptically polarized laser pulse, optimum convolution of dual short pulses, and two-color mixed nonresonant laser pulses. It is found that the rescattering...
Possibility of methane conversion into heavier hydrocarbons using nanosecond lasers
, Article Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy ; Volume 156 , 2016 , Pages 118-122 ; 13861425 (ISSN) ; Irani, E ; Sadighi Bonabi, R ; Sharif University of Technology
Elsevier
2016
Abstract
Effect of nanosecond lasers on the methane dissociation is experimentally studied by using three different laser wavelengths at 248 nm, 355 nm and 532 nm. C2H2 generation is measured as a major reaction product in experiments and the energy consumptions in production of this component are measured as 5.8 MJ/mol, 3.1 MJ/mol and 69.0 MJ/mol, for 355 nm, 532 nm and 248 nm wavelengths, respectively. The mechanism of conversion and production of new stable hydrocarbons is also theoretically investigated. It is found that in theoretical calculations, the ion-molecule reactions should be included and this leads to a unique approach in proper explanation of the experimental measurements
Styrene energetics and characterization of its conjugate base: An example of isotopic labeling gone awry
, Article International Journal of Mass Spectrometry ; 2016 ; 13873806 (ISSN) ; Lis, L ; Kass, S. R ; Sharif University of Technology
Elsevier
Abstract
The equilibrium acidity of styrene was measured (δH°acid(PhCHCH2)=390.6±0.5kcalmol-1) and its deprotonation site was revised from the ortho position on the aromatic ring to the α-hydrogen atom based upon deuterium-labeling studies and extensive computations. Somewhat surprisingly, the nature of the anionic base plays a critical role in properly determining the ionization site and avoiding misleading results due to extraordinary hydrogen-deuterium exchange. Bracketing the electron affinity of α-styryl radical (PhC CH2, 23.1±3.4kcalmol-1) enabled the α-CH bond dissociation energy (100.1±3.4kcalmol-1) of styrene and the effect of a phenyl substituent at an sp2-hybridized carbon to be...
Binding energy of bipartite quantum systems: Interaction, correlations, and tunneling
, Article Physical Review A ; Volume 101, Issue 1 , 2020 ; Bathaee, M ; Bakhshinezhad, F ; Rezakhani, A. T ; Bahrampour, A. R ; Sharif University of Technology
American Physical Society
2020
Abstract
We provide a physically motivated definition for the binding energy (or bond dissociation) of a bipartite quantum system. We consider coherently applying an external field to cancel out the interaction between the subsystems, to break their bond and separate them as systems from which no work can be extracted coherently by any cyclic evolution. The minimum difference between the average energies of the initial and final states obtained this way is defined as the binding energy of the system. We show that the final optimal state is a passive state. We discuss how the required evolution can be realized through a sequence of control pulses. The utility of our definition is illustrated through...
Efficient photo-dissociation of CH4 and H2CO molecules with optimized ultra-short laser pulses
, Article AIP Advances ; Volume 5, Issue 11 , 2015 ; 21583226 (ISSN) ; Irani, E ; Sadighi Bonabi, R ; Sharif University of Technology
American Institute of Physics Inc
2015
Abstract
The fragmentation dynamics of CH4 and H2CO molecules have been studied with ultra-short pulses at laser intensityof up to 1015Wcm-2. Three dimensional molecular dynamics calculations for finding the optimized laser pulses are presented based on time-dependent density functional theory and quantum optimal control theory. A comparison of the results for orientation dependence in the ionization process shows that the electron distribution for CH4 is more isotropic than H2CO molecule. Total conversion yields of up to 70% at an orientation angle of 30o for CH4 and 65% at 900 for H2CO are achieved which lead to enhancement of dissociation probability
Phenylcyclopropane energetics and characterization of its conjugate base: Phenyl substituent effects and the C-H bond dissociation energy of cyclopropane
, Article Journal of Organic Chemistry ; Volume 81, Issue 19 , 2016 , Pages 9175-9179 ; 00223263 (ISSN) ; Lis, L ; Kass, S. R ; Sharif University of Technology
American Chemical Society
Abstract
The α-C-H bond dissociation energy (BDE) of phenylcyclopropane (1) was experimentally determined using Hess' law. An equilibrium acidity determination of 1 afforded ΔH°acid = 389.1 ± 0.8 kcal mol-1, and isotopic labeling established that the α-position of the three-membered ring is the favored deprotonation site. Interestingly, the structure of the base proved to be a key factor in correctly determining the proper ionization site (i.e., secondary amide ions are needed, and primary ones and OH- lead to incorrect conclusions since they scramble the deuterium label). An experimental measurement of the electron affinity of 1-phenylcyclopropyl radical (EA = 17.5 ± 2.8 kcal mol-1) was combined...
Mechanism of catalytic decomposition of CH3I on the Cu(111) surface: A UBI-QEP approach
, Article Langmuir, Washington, DC, United States ; Volume 16, Issue 21 , 2000 , Pages 8095-8099 ; 07437463 (ISSN) ; Gobal, F ; Sharif University of Technology
ACS
2000
Abstract
The method of unity bond index-quadratic exponential potential (UBI-QEP) and the computer simulation of the temperature programmed desorption (TPD) patterns are employed to derive the kinetic and thermodynamic parameters associated with the steps of the pathway we propose for the catalytic decomposition of methyl iodide on the Cu(111) surface. Assuming a highly reactive `hot methyl' surface intermediate and on the basis of our calculations it is concluded that the desorption of a part of this species is responsible for the reported methyl radical TPD peak at 140 K, while a part of this surface species is trapped in the three-fold sites of the Cu(111) surface and desorbs to form the reported...
Electronic structure of some thymol derivatives correlated with the radical scavenging activity: Theoretical study
, Article Food Chemistry ; Vol. 165, issue , Dec , 2014 , p. 451-459 ; Jebeli Javanb, M ; Sharif University of Technology
Abstract
Molecules acting as antioxidants capable of scavenging reactive oxygen species (ROS) are of upmost importance in the living cell. Thymol derivatives exhibit various antioxidant activities and potential health benefits. Exploration of structure-radical scavenging activity (SAR) was approached with a wide range of thymol derivatives. To accomplish this task, the DPPH experimental assay along with quantum-chemical calculations were also employed for these compounds. By comparing the structural properties of the derivatives of interest, their antioxidant activity was explained by the formation of an intramolecular hydrogen bond and the presence of unsaturated double bond (–CHdouble bond; length...
Investigation of intense femto-second laser ionization and dissociation of methane with time-dependent density-functional approach
, Article Chemical Physics Letters ; Vol. 604 , 2014 , Pages 60-67 ; ISSN: 00092614 ; Sadighi Bonabi, R ; Anvari, A ; Sharif University of Technology
Abstract
Three dimensional calculations of electronic dynamics of CH4 in a strong laser field are presented with time-dependent density-functional theory. Time evolution of dipole moment and electron localization function is presented. The dependence of dissociation rate on the laser characters is shown and optimal effective parameters are evaluated. The optimum field leads to 76% dissociation probability for Gaussian envelope and 40 fs (FWHM) at 10 16 W cm-2. The dissociation probability is calculated by optimum convolution of dual short pulses. By combining of field assisted dissociation process and Ehrenfest molecular dynamics, time variation of bond length, velocity and orientation effect are...
Super-hydrophilic characteristic of thermochemically prepared CdS nanocrystals
, Article Physica E: Low-Dimensional Systems and Nanostructures ; Vol. 58 , April , 2014 , pp. 146-152 ; ISSN: 13869477 ; Taghavinia, N ; Babaei, A ; Sharif University of Technology
Abstract
CdS nanocrystals were thermochemically (thermally activated) synthesized thorough the reaction between CdSO4 and Na2S 2O3 in an aqueous solution. Thioglycolic Acid (TGA) was used as the capping agent and catalyst of the reaction. The method was based on heat activated dissociation of Na2S2O3 and controllable release of S and free electrons in the solution. CdS NCs were formed by heating the sample solution at 96 C for 1 h. The results of optical spectroscopy and transmission electron microscopy demonstrated round shape NCs with sizes about 3.0 nm. The nanocrystals were also luminescent and represented a broad emission with a peak located at 515 nm and FWHM of 160 nm. Several samples were...
Single-hydrogen dissociation paths for upright and flat acetophenone adsorbates on the Si(001) surface
, Article Journal of Physical Chemistry C ; Volume 118, Issue 41 , 16 October , 2014 , Pages 23682-23689 ; ISSN: 19327447 ; Sharif University of Technology
Abstract
Using cluster-based density functional theory we investigate adsorption configurations of an acetophenone molecule on a Si(001) surface and their follow-up proton transfer processes. We examine two possible types of dative-adsorption configurations, up-right standing and flat, as well as compute their follow-up kinetically preferable on-dimer, interdimer, and inter-row proton transfers. Energetics of possible conversions between the achieved adsorption configurations are computed as well. Using all the data obtained, we theoretically illustrate reaction pathways leading to detached hydrogen positions captured in STM imaging of a Si(001) surface exposed to acetophenone vapor at room...
Electrostatically defying cation-cation clusters: Can likes attract in a low-polarity environment?
, Article Journal of Physical Chemistry A ; Volume 117, Issue 38 , 2013 , Pages 9252-9258 ; 10895639 (ISSN) ; Ramezani, M ; Fattahi, A ; Kass, S. R ; Sharif University of Technology
2013
Abstract
Like-charge ion pairing is commonly observed in protein structures and plays a significant role in biochemical processes. Density functional calculations combined with the conductor-like polarizable continuum model were employed to study the formation possibilities of doubly charged noncovalently linked complexes of a series of model compounds and amino acids in the gas phase and in solution. Hydrogen bond interactions were found to offset the Coulombic repulsion such that cation-cation clusters are minima on the potential energy surfaces and neither counterions nor solvent molecules are needed to hold them together. In the gas phase the dissociation energies are exothermic, and the...
The effect of ultraviolet lasers on conversion of methane into higher hydrocarbons
, Article Laser and Particle Beams ; Volume 31, Issue 3 , 2013 , Pages 481-486 ; 02630346 (ISSN) ; Irani, E ; Sadighi Bonabi, R ; Sharif University of Technology
2013
Abstract
Conversion of CH4 molecule into higher hydrocarbons using two different wavelengths of 248 nm KrF laser and 355 nm of third harmonic of Nd:YAG laser is studied experimentally and theoretically. The stable products are analyzed and the effect of pressure on conversion of methane is measured. The detected reaction products are C2H2, C2H4, and C2H6. The conversion efficiency of 33.5% for 355 nm in comparison to 2.2% conversion for 248 nm for C2H2 is achieved. The potential of laser parameters as an important variable in controlling of final products is investigated
Dissociation of C-H molecular bond of methane by pulse shaped ultra-intense laser field
, Article Chemical Physics Letters ; Volume 560 , 2013 , Pages 60-65 ; 00092614 (ISSN) ; Irani, E ; Navid, H. A ; Dehghani, Z ; Anvari, A ; Sadighi Bonabi, R ; Sharif University of Technology
2013
Abstract
The effects of laser field and laser pulse width on the dissociation probability of C-H bond of CH4 have been investigated. Calculation of time dependent Schrödinger equation by grid spectral method is carried out and it is produced optimistic results in comparison to the earlier Quasi-classical calculations. The results show that there is an excellent match with experimental data. In this work, a number of results in the emerging field of laser with intensity of I = 8 × 1013 W cm-2 and pulse duration of 100 fs are presented. The present modulated field leads to more than 20% improvement in the dissociation probability
Theoretical investigation on antioxidant activity of bromophenols from the marine red alga Rhodomela confervoides: H-atom vs electron transfer mechanism
, Article Journal of Agricultural and Food Chemistry ; Volume 61, Issue 7 , 2013 , Pages 1534-1541 ; 00218561 (ISSN) ; Javan, M. J ; Tehrani, Z. A ; Sharif University of Technology
2013
Abstract
Bromophenols are known as antioxidant radical scavengers for some biomolecules such as those in marine red alga. Full understanding of the role played by bromophenols requires detailed knowledge of the radical scavenging activities in probable pathways, a focus of ongoing research. To gain detailed insight into two suggested pathways, H-atom transfer and electron transfer, theoretical studies employing first principle quantum mechanical calculations have been carried out on selected bromophenols. Detailed investigation of the aforementioned routes revealed that upon H-atom abstraction or the electron transfer process, bromophenols cause an increase in radical species in which the unpaired...