Sharif Digital Repository

The solubility of sulfur dioxide (SO2) and carbon dioxide (CO2) at P = 1 bar in a series of imidazolium-based room-temperature ionic liquids (RTILs) is calculated by Monte Carlo simulation in NPT ensemble using the OPLS-UA force field and Widom particle insertion method. The studied ILs were 1-butyl-3-methylimidazolium ([bmim]+) tetrafluoroborate ([BF4]-), [bmim]+ hexafluorophosphate ([PF 6]-), [bmim]+ bromide ([Br]-), [bmim]+ nitrate ([NO3]-), [bmim]+ bis-(trifluoromethyl) sulfonylimide ([Tf2N]-), and 1-ethyl-3-methylimidazolium tetrafluoroborate ([emim][BF4]). To validate the simulations, the liquid density of studied ILs and the solubility of CO2 in [bmim][PF6] was compared with... 

Developments of sensitive, rapid, and cheap systems for identification of a wide range of biomolecules have been recognized as a critical need in the biology field. Here, we introduce a simple colorimetric sensor array for detection of biological thiols, based on aggregation of three types of surface engineered gold nanoparticles (AuNPs). The low-molecular-weight biological thiols show high affinity to the surface of AuNPs; this causes replacement of AuNPs' shells with thiol containing target molecules leading to the aggregation of the AuNPs through intermolecular electrostatic interaction or hydrogen-bonding. As a result of the predetermined aggregation, color and UV-vis spectra of AuNPs... 

An example of zeolite selectivity (MFI → MOR) driven by synthesis aging time has been studied. Using N,N,N′,N′-tetramethyl-N,N′-dipropyl-ethylenediammonium diiodide (TMDP) as an organic structure-directing agent (OSDA), the zeolite phases obtained at 2 h (MFI 97%), 8 h (MFI 84%, MOR 16%) and 24 h (MFI 43%, MOR 57%) have been characterized by powder X-ray diffraction. The results suggest that at intermediate aging time, namely 8 h and 24 h, the dominant phase (MFI) is displaced by MOR. Different techniques (FT-IR, Raman, 13C MAS NMR, TGA/DTG and HC microanalysis) have been employed to verify the OSDA integrity and occlusion inside the zeolite micropores as well as to quantify the water and... 

Here, we report the synthesis and characterization of a binuclear Co(ii) complex (Co2(2py)2Cl4) with two dinaphtho-diazacrown ether macrocyclic ligands, bearing two pyridine arms as a colourimetric and fluorescent sensor for detecting different xylene isomers as well as acting as a catalyst for the oxidation of o- and m-xylene under vacuum at room temperature. Chromogenic detection occurred when Co2(2py)2Cl4 was exposed to the xylene isomers, wherein the original blue colour of the complex changed to green and green-blue in the presence of o- and m-xylene, respectively. Meanwhile, no colour change was observed in the presence of the p-xylene isomer. Fluorescence spectroscopy revealed that... 

In this paper the free vibration of single walled carbon nanopeapods encapsulating C60 molecules is considered. The nanopeapod is embedded in an elastic medium and clamped at both ends. The Euler-Bernoulli beam model is used for the carbon nanotube and the C60 molecules are considered as lumped masses attached to the beam. Based on the nonlocal elasticity theory the governing equation of motion is derived and the resonance frequencies of the nanopeapod are obtained. The effects of small scale, foundation stiffness and ratio of the fullerenes' mass to the nanotube's mass on the frequencies are studied and some conclusions are drawn  

Metabolomics is the science of studying small molecules (metabolites) in biological systems with the aim of getting insight into cells, biofluids and organisms. Chemometric methods are powerful tools to address data problems generated in metabolomic studies and to extract valuable information. This review focuses mainly on a range of chemometric methods used for processing of metabolomics data generated from gas chromatography-mass spectrometry (GC-MS) and comprehensive two-dimensional gas chromatography-mass spectrometry (GC × GC-MS). Herein, essential skills used for preprocessing of raw data, multivariate resolution, pattern recognition, variable selection and identification of... 

Various mixtures of surfactants and nanosilica particles were investigated to assess their influence on rising bubble hydrodynamics. For this purpose, local velocities of rising bubbles were measured experimentally. Also, the effects of concentration of three types of surface-modified silica nanoparticles on density, viscosity, and surface tension of surfactant solutions were determined. Experimental results revealed that the simultaneous presence of nanoparticles and surfactant molecules led to the decrease of local velocities of rising bubbles. The presence of nanoparticles in surfactant solutions leads to a more reduction of bubble local velocity. This could be caused by the formation of... 

Local velocities of bubbles rising in four different nanosilica solutions were investigated experimentally. Also, the density, viscosity, and surface tension of fumed nanosilica and modified nanosilica solutions were measured. Heat treatment and chemical functionalization were used to modify the properties of silica nanoparticles. It was found that the addition of nanosilica affected the hydrodynamics of the rising bubble by increasing the drag friction at the interface. However, environmentally responsive nanosilica particles behaved like surfactant molecules, due to the interfacial activity of hydrophilic and hydrophobic chains. Silica nanoparticles coated with both hydrophilic and... 

By considering the detailed structure of DNA in the base pair level, two possible definitions of the persistence length are compared. One definition is related to the orientation of the terminal base pairs, and the other is based on the vectors which connect two adjacent base pairs at each end of the molecule. It is shown that although these definitions approach each other for long DNA molecules, they are dramatically different on short length scales. We show analytically that the difference mostly comes from the shear flexibility of the molecule and can be used to measure the shear modulus of DNA  

The geometries of the complexes of Be 2+, Mg 2+, and Ca 2+ metal cations with borazine ring were studied. The complexes were optimized at the B3LYP level and the 6-311++G(d,p) basis set. Then, the interaction energies corrected by basis set super position error were calculated in the same level. The results show that interaction energy is strongly dependent on the charge-to-size ratio of the cation. Therefore, Be 2+ cation has the most interaction energy value with respect to Mg 2+ and Ca 2+ metal cations. Natural bond orbital analysis was performed to calculate the charge transfer and natural population analysis of the complexes. Quantum theory of atoms in molecules was also applied to... 

Tolyltriazole (TTA) is a well-defined corrosion inhibitor for copper and copper alloys. However, there is little literature about its corrosion inhibition performance for mild steels in corrosive environments. This paper studied the electrochemical behavior of TTA in 0.5 M HCl solutions. Also, the morphology and nature of TTA layers on the steel surface were investigated. Electrochemical results showed that TTA is an excellent corrosion inhibitor for mild steel in acidic media with an efficiency of 91% for 0.07 M concentration. The results also indicated that TTA is a mixed-type inhibitor. XRD analysis revealed that the inhibition mechanism of TTA is based on the formation of an organic film... 

The Sun is located inside an enormous local cavity filled with a million degree, ionized hydrogen gas and surrounded by a wall of dense and cold gas, this cavity is known as the Local Bubble (LB). Since the tempreture of Local Bubble is high, the typical singly-ionized atoms or molecules can not survive at this high tempreture. To overcome this problem we should probe the Local Bubble using species which survive under this condition so we have done a whole sky survey in north hemisphere by observing absorptions in the Diffuse Interstellar Bands (DIBs) for sight-lines with distance >300 pc. We have done 30 nights observation and have observed 473 bright stars. We found that the correlations... 

CO2 injection has proved to be the most common and efficient enhanced oil recovery techniques which leads to more residual oil recovery. Unfavorable sweep efficiency which results in fingering propagation and causes early gas breakthrough is the most challenging issue of gas flooding process. The aim of this work is to study foam stability and analyze the mobility of CO2 foam stabilized by mixture of raw silica nanoparticles and ethyl hexadecyl dimethyl ammonium bromide (cationic surfactant). The result is obtained through both dynamic and static techniques using a new adsorption index.NPS-stabilized foams are generated using Ross-Miles method. A novel index for the adsorption of surfactant... 

Dynamic behavior of fluid-fluid interactions can potentially affect the performance of any enhanced oil recovery (EOR) process including low salinity water flooding. In this work, dynamic interfacial tension (IFT) of crude-oil/brine system is measured in a wide range of salinity of sea water (SW), from 50-time diluted sea water (SW50D) to 2-time concentrated sea water (SW2C). Contrary to the most of published IFT trends in the literature, for the system under investigation here, as the brine salinity increases the crude-oil/brine IFT reduces, which cannot be explained using the existing theories. The lack of a physical model to explain the observed phenomena was the motivation to develop a... 

Chemical reactions are a prominent feature of molecular communication (MC) systems, with no direct parallels in wireless communications. While chemical reactions may be used inside the transmitter nodes, receiver nodes or the communication medium, we focus on its utility in the medium in this paper. Such chemical reactions can be used to perform computation over the medium as molecules diffuse and react with each other (physical-layer computation). We propose the use of chemical reactions for the following purposes: (i) to reduce signal-dependent observation noise of receivers by reducing the signal density, (ii) to realize molecular physical-layer network coding (molecular PNC) by... 

Chemical reactions are a prominent feature of molecular communication systems, with no direct parallels in wireless communications. While chemical reactions may be used inside the transmitter nodes, receiver nodes, or the communication medium, we focus on its utility in the medium in this paper. Such chemical reactions can be used to perform computation over the medium as molecules diffuse and react with each other (physical-layer computation). We propose the use of chemical reactions for the following purposes: 1) to reduce signal-dependent observation noise of receivers by reducing the signal density; 2) to realize molecular physical-layer network coding (PNC) by performing the natural XOR... 

Flow velocity is an important characteristic of the fluidic mediums. In this article, we introduce a molecular based flow velocity meter consisting of a molecule releasing node and a receiver that counts these molecules. We consider both flow velocity detection and estimation problems, which are employed in different applications. For the flow velocity detection, we obtain the maximum a posteriori (MAP) decision rule. To analyze the performance of the proposed flow velocity detector, we obtain the error probability, its Gaussian approximation and Chernoff information (CI) upper bound, and investigate the optimum and sub-optimum sampling times accordingly. We show that, for binary hypothesis,... 

The reverse osmosis (RO) desalination capability of hydrogenated and hydroxylated graphene nanomesh membranes (GNMs) inspired by the morphology of carbon nitride (C2N) has been studied by using molecular dynamics simulation. As an advantage, water permeance of the GNMs is found to be several orders of magnitude higher than that of the available RO filters and comparable with highly strained C2N (S-C2N) as follows: 6,6-H,OH > 12-H > S-C2N > 5,5-H,OH > 10-H. The reverse order is found for salt rejection, regardless of S-C2N. The hydrophilic character of the incorporated -OH functional group is believed to be responsible for linking the water molecules in feed and permeate sides via the... 

Various thermodynamic and structural properties of amino acid ionic liquids (AAILs), comprising 1-(2-Hydroxyethyl)-3-methyl imidazolium ([C 2 OHmim] + ) cation mixed with Glycinate [Gly], Serinate [Ser], Alaninate [Ala], and Prolinate [Pro] AA anions are explored using molecular dynamic (MD) simulations and quantum theory of atoms in molecules (QTAIM) analysis. In general, the simulated thermodynamic results are in good agreement with the reported experimental data. Structural dependence of vdW- and electrostatic energies of AAILs is [Pro] > [Ala] > [Ser] > [Gly] and [Gly] > [Ala] > [Pro] > [Ser], respectively. The similar trend of electrostatic energies is found for their interaction... 

The influence of the addition of the nonionic surfactants C12DMPO, C14DMPO, C10OH, and C10EO5 at concentrations between 10-5 and 10-1 mmol/L to solutions of β-casein (BCS) and β-lactoglobulin (BLG) at a fixed concentration of 10-5 mmol/L on the dilational surface rheology is studied. A maximum in the viscoelasticity modulus |E| occurs at very low surfactant concentrations (10-4 to 10-3 mmol/L) for mixtures of BCS with C12DMPO and C14DMPO and for mixtures of BLG with C10EO5, while for mixture of BCS with C10EO5 the value of |E| only slightly increased. The |E| values...