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    Hybrid silk fibroin–gelatin nanofibrous sheet for drug delivery and regenerative medicine: In-vitro characterization and controlled release of simvastatin/protein

    , Article Polymers for Advanced Technologies ; Volume 32, Issue 3 , 2021 , Pages 1333-1344 ; 10427147 (ISSN) Hajiabbas, M ; Alemzadeh, I ; Vossoughi, M ; Sharif University of Technology
    John Wiley and Sons Ltd  2021
    Abstract
    Blend drug-loading method in electrospun scaffolds has gained much attention as a cost-effective and simple delivery system in regenerative medicine. However, it has some drawbacks, such as the burst release of encapsulated drugs and denaturing active agents in harsh organic solvents. In this study, a new silk fibroin-gelatin (SF–G) fibrous sheet has been introduced as an engineered scaffold and a straightforward drug delivery system for skin tissue engineering applications. The hybrid sheets have been prepared via co-electrospinning and in-situ crosslinking methods without corrosive solvents and toxic crosslinking agents. To evaluate the proposed scaffold as a controlled release system, the... 

    Deep analysis of Growth’s Pattern of Technological Capabilities in Knowledge-based Companies: Case Studies in Four Different Sectors

    , M.Sc. Thesis Sharif University of Technology Ghorbanian, Mohammad (Author) ; Souzanchi, Ebrahim (Supervisor)
    Abstract
    Technological capabilities as one of the growth’s aspects in developing countries have gained focus for research in last years. This study attempt to analyze the pattern of technological capabilities in four different sectors including Optic, Aerospace, Pharmaceutical and Biotechnology. In each sectors four Iranian companies as the case studies are selected. After deep interviews with key people in each company, required data is gathered. Data in each company is analyzed. The results of analysis for companies in one sector are gathered for analyzing each sector. In order to evaluate technological capabilities, the time required to improve, lead-lag relationship for gaining higher levels of... 

    Investigation of Constructing a Biosensor for Endotoxin Detection in Biological Products and Comparison of the Results with Conventional Endotoxin Detection Methods

    , M.Sc. Thesis Sharif University of Technology Zandieh, Mohammad (Author) ; Vosoughi, Manouchehr (Supervisor) ; Hosseini, Nezameddin (Supervisor)
    Abstract
    Lipopolysaccharide (LPS), also known as endotoxin, is a highly toxic component exists in the outer membrane of gram negative bacteria. It releases into the environment during every phase of bacterial growth cycle, so it causes contamination of a wide range of biopharmaceutical products. Even small quantities of endotoxin injected to human body can result in fever, septic shock, and death. Therefore, it is highly important to detect and also quantify endotoxin of biopharmaceutical products in quality control laboratories. The most validated method used for endotoxin detection is Limulus Amebocyte Lysate (LAL). Although this method is sensitive, it has some unavoidable drawbacks such as highly... 

    Investigation and Comparison of Data Mining Techniques Used for Pharmaceutical Drug Consumption Pattern Prediction

    , M.Sc. Thesis Sharif University of Technology Bastani Allahabadi, Shahrzad (Author) ; Haji, Alireza (Supervisor) ; Fatahi Valilai, Omid (Co-Supervisor)
    Abstract
    Data mining is the process of extracting information from large data sets using algorithms and methods derived from the field of statistics, machine learning and database management systems. Data mining, popularly known as knowledge discovery in big data, enables companies and organizations to make informed decisions by collecting, aggregating, analyzing and accessing company data. The pharmaceutical industry is one of the most important levels of the drug supply chain, which has a significant impact on the healthcare sector of any society. In this context data mining can be used in various procedure such as discovery of a new medicine, sequential registration of clinical trials, combining... 

    Drug Target Binding Affinity Prediction Using a Deep Generative Model Based on Molecular and Biological Sequences

    , M.Sc. Thesis Sharif University of Technology Zamani Emani, Mojtaba (Author) ; Koohi, Somayyeh (Supervisor)
    Abstract
    Drug-target binding affinity prediction is one of the most important and vital part of drug discovery. The computational methods to predict binfing affinity is a standing challenge in drug discovery. State-of-the-art models are usually based on supervised machine learning with known label information. It is expensive and time-consuming to collect labeled data. This thesis proposes a semi-supervised model based on convolutional GAN (Generative adversarial networks). The model consists of two Gans and Two CNN blocks for feature extraction and fully connected layers for prediction. Gan can learn protein and drug features from unlabeled data. We evaluate the performance of our method using four... 

    Drug Synergy Prediction on Diverse Cancer Cell-Lines Using Deep Learning

    , M.Sc. Thesis Sharif University of Technology Labbaf, Farzaneh (Author) ; Hossein Khalaj, Babak (Supervisor)
    Abstract
    Despite significant progress in cancer treatment, drug resistance remains a major challenge. Synergistic drug combinations offer a promising approach to overcome drug resistance and reduce side effects. Still, despite high-throughput testing technologies, existing drug combination databases suffer from biases and a lack of diversity in tested cancer cell lines, which challenges the prediction of drug response on novel cell targets. To address this critical need, we designed a two-level deep learning method that uses large-scale gene expression datasets to estimate the score and synergy of drug compounds on a wide variety of cancer cell lines. Our model includes an auto-encoder that train on... 

    Manufacturing, Evaluation, and Optimization of Microreactor for Continuous Synthesis of Pharmaceutical

    , M.Sc. Thesis Sharif University of Technology Mirchi, Arman (Author) ; Kazemeini, Mohammad (Supervisor) ; Hosseinpour, Vahid (Co-Supervisor)
    Abstract
    Clopidogrel, as an antiplatelet medicine, is currently one of the most widely used medicines to reduce the risk of stroke and prevent the formation of blood clots for heart patients all over the world. This medicine is still produced using the conventional approach of drug production, i.e. batch method. On the other hand, due to the many advantages of flow chemistry, such as increasing the rate of mass and heat transfer, increasing safety, performance, etc., the production of medicines using the flow approach has been highly regarded by large pharmaceutical companies in recent years. In this research, the production of clopidogrel was done using a continuous flow approach and different... 

    A new order splitting model with stochastic lead times for deterioration items

    , Article International Journal of Systems Science ; Vol. 45, Issue. 9 , 2014 , pp. 1936-1954 ; ISSN: 00207721 Sazvar, Z ; Jokar, M. R. A ; Baboli, A ; Sharif University of Technology
    Abstract
    In unreliable supply environments, the strategy of pooling lead time risks by splitting replenishment orders among multiple suppliers simultaneously is an attractive sourcing policy that has captured the attention of academic researchers and corporate managers alike. While various assumptions are considered in the models developed, researchers tend to overlook an important inventory category in order splitting models: deteriorating items. In this paper, we study an order splitting policy for a retailer that sells a deteriorating product. The inventory system is modelled as a continuous review system (s, Q) under stochastic lead time. Demand rate per unit time is assumed to be constant over... 

    Modification of well-aligned carbon nanotubes with dihexadecyl hydrogen phosphate: Application to highly sensitive nanomolar detection of simvastatin

    , Article Journal of Applied Electrochemistry ; Volume 44, Issue 2 , February , 2014 , Pages 263-277 ; ISSN: 0021891X Fayazfar, H ; Afshar, A ; Dolati, A ; Ghalkhani, M ; Sharif University of Technology
    Abstract
    The first usage of dihexadecyl hydrogen phosphate (DHP)-modified highly oriented multi-walled carbon nanotube (MWCNTs) forests in a sensor configuration was developed to investigate the electrochemical oxidation and determination of simvastatin (SV) in pharmaceutical dosage forms. Synthesis of well-aligned MWCNTs on a conductive Ta substrate by catalytic vapor deposition technique using a common chemical, ethylenediamine, and without being plasma-aided was reported. The electrochemical behavior and oxidation of SV at the aligned MWCNTs/DHP/Ta electrode were discussed in detail through cyclic voltammetry and differential pulse voltammetry. This modified electrode showed considerably higher... 

    A robust R&D project portfolio optimization model for pharmaceutical contract research organizations

    , Article International Journal of Production Economics ; Vol. 158, issue , 2014 , p. 18-27 Hassanzadeh, F ; Modarres, M ; Nemati, H. R ; Amoako-Gyampah, K ; Sharif University of Technology
    Abstract
    Pharmaceutical drug Research and Development (R&D) outsourcing to contract research organizations (CROs) has experienced a significant growth in recent decades and the trend is expected to continue. A key question for CROs and firms in similar environments is which projects should be included in the firm's portfolio of projects. As a distinctive contribution to the literature this paper develops and evaluates a business support tool to help a CRO decide on clinical R&D project opportunities and revise its portfolio of R&D projects given the existing constraints, and financial and resource capabilities. A new mathematical programming model in the form of a capital budgeting problem is... 

    Highly sensitive 3D gold nanotube ensembles: Application to electrochemical determination of metronidazole

    , Article Electrochimica Acta ; Volume 106 , 2013 , Pages 288-292 ; 00134686 (ISSN) Mollamahale, Y. B ; Ghorbani, M ; Ghalkhani, M ; Vossoughi, M ; Dolati, A ; Sharif University of Technology
    2013
    Abstract
    Three-dimensional gold nanoelectrode ensembles (3D GNE) have proven to be promising nanoelectrodes by representing much higher sensitivity compared to both their 2D nanostructures and bulk counterparts. The sensitivity of 3D gold nanotubes (GNTs) fabricated through electrodeposition inside the pores of polycarbonate templates, was examined toward metronidazole (MTZ) as one of their pharmaceutical applications. The electrochemical behavior of MTZ at the 3D GNT-modified electrode was discussed in detail through cyclic voltammetry (CV) which suggested an irreversible reduction of nitro group to the corresponding hydroxylamine and a subsequently reversible redox peak for the corresponding... 

    Retina-choroid-sclera permeability for ophthalmic drugs in the vitreous to blood direction: quantitative assessment

    , Article Pharmaceutical research ; Volume 30, Issue 1 , January , 2013 , Pages 41-59 ; 1573904X (ISSN) Haghjou, N ; Abdekhodaie, M. J ; Cheng, Y. L ; Sharif University of Technology
    2013
    Abstract
    To determine the outward permeability of retina-choroid-sclera (RCS) layer for different ophthalmic drugs and to develop correlations between drug physicochemical properties and RCS permeability. A finite volume model was developed to simulate pharmacokinetics in the eye following drug administration by intravitreal injection. The RCS permeability was determined for 32 compounds by best fitting the drug concentration-time profile obtained by simulation with previously reported experimental data. Multiple linear regression was then used to develop correlations between best fit RCS permeability and drugs physicochemical properties. The RCS drug permeabilities had values that ranged over 3 ×... 

    Preparation of a naltrexone HCL potentiometric sensor and its application to pharmaceutical analysis and drug determination in biological fluids

    , Article Journal of Food and Drug Analysis ; Volume 19, Issue 4 , 2011 , Pages 445-451+539 ; 10219498 (ISSN) Ghorbani Bidkorbeh, F ; Shahrokhian, S ; Mohammadi, A ; Dinarvand, R ; Sharif University of Technology
    Abstract
    A novel ion selective electrode is fabricated for naltrexone HCl and used in pharmaceutical analysis and drug determination in biological fluids without complicated pretreatments and extractions, using direct potentiometry. The naltrexone complex with sodium tetraphenyl borate (NaTPB) is obtained by in situ soaking PVC membrane electrode in an 1 × 10 -3 M naltrexone solution. The sensor exhibited fast, reproducible and linear sub-Nernstian response over concentration range of 1 × 10 -5 - 1 × 10 -3 M with a detection limit of 5 × 10 -6 M. The membrane sensor was successfully applied to the determination of naltrexone in capsules as well as for its determination in urine and plasma samples  

    Glassy carbon electrode modified with 3D graphene–carbon nanotube network for sensitive electrochemical determination of methotrexate

    , Article Sensors and Actuators, B: Chemical ; Volume 239 , 2017 , Pages 617-627 ; 09254005 (ISSN) Asadian, E ; Shahrokhian, S ; Iraji Zad, A ; Ghorbani Bidkorbeh, F ; Sharif University of Technology
    Elsevier B.V  2017
    Abstract
    In the present study, a 3D porous graphene-carbon nanotube (G-CNT) network is successfully constructed on the surface of glassy carbon electrode (GCE) by electrochemical co-deposition from a concentrated graphene dispersion. The large accessible surface area provided by the interpenetrated graphene backbone in one hand and the enhanced electrical conductivity of the 3D network by incorporating CNTs on the other hand, dramatically improved the electrochemical performance of GCE in determination of Methotrexate (MTX) as an important electroactive drug compound. Under the optimum conditions, the electrode modification led to a significant increase in the anodic peak current (∼25 times) along... 

    Micro and nanoscale technologies in oral drug delivery

    , Article Advanced Drug Delivery Reviews ; Volume 157 , 2020 , Pages 37-62 Ahadian, S ; Finbloom, J. A ; Mofidfar, M ; Diltemiz, S. E ; Nasrollahi, F ; Davoodi, E ; Hosseini, V ; Mylonaki, I ; Sangabathuni, S ; Montazerian, H ; Fetah, K ; Nasiri, R ; Dokmeci, M. R ; Stevens, M. M ; Desai, T. A ; Khademhosseini, A ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Oral administration is a pillar of the pharmaceutical industry and yet it remains challenging to administer hydrophilic therapeutics by the oral route. Smart and controlled oral drug delivery could bypass the physiological barriers that limit the oral delivery of these therapeutics. Micro- and nanoscale technologies, with an unprecedented ability to create, control, and measure micro- or nanoenvironments, have found tremendous applications in biology and medicine. In particular, significant advances have been made in using these technologies for oral drug delivery. In this review, we briefly describe biological barriers to oral drug delivery and micro and nanoscale fabrication technologies.... 

    Immobilization of penicillin G acylase on non-porous ultrafine silica particles

    , Article Scientia Iranica ; Volume 12, Issue 3 , 2005 , Pages 295-299 ; 10263098 (ISSN) Fazelinia, H ; Kheirolomoom, A ; Sharif University of Technology
    Sharif University of Technology  2005
    Abstract
    In this paper, immobilization of penicillin G aclylase onto non-porous ultrafine silica particles has been studied. The amount of penicillin G acylase immobilized was increased by increasing the free enzyme concentration and, at 0.45 mg/ml concentration of the free enzyme, 80% of the enzyme was immobilized. The optimum pH for immobilization was found to be 7.0, close to the pl of the enzyme. Although immobilization of the enzyme on ultrafine silica particles with and without glutaraldehyde showed almost the same activities, the enzyme immobilized with glutaraldehyde retained its initial activity much longer during 40 cycle-repeated batches with a half life of 163.2 h. © Sharif University of... 

    Numerical and experimental evaluation of ultrasound-assisted convection enhanced delivery to transfer drugs into brain tumors

    , Article Scientific Reports ; Volume 12, Issue 1 , 2022 ; 20452322 (ISSN) Boroumand, A ; Mehrarya, M ; Ghanbarzadeh Dagheyan, A ; Ahmadian, M. T ; Sharif University of Technology
    Nature Research  2022
    Abstract
    Central Nervous System (CNS) malignant tumors are a leading cause of death worldwide with a high mortality rate. While numerous strategies have been proposed to treat CNS tumors, the treatment efficacy is still low mainly due to the existence of the Blood–Brain Barrier (BBB). BBB is a natural cellular layer between the circulatory system and brain extracellular fluid, limiting the transfer of drug particles and confining the routine treatment strategies in which drugs are released in the blood. Consequently, direct drug delivery methods have been devised to bypass the BBB. However, the efficiency of these methods is not enough to treat deep and large brain tumors. In the study at hand, the... 

    Shuffling multivariate adaptive regression splines and adaptive neuro-fuzzy inference system as tools for QSAR study of SARS inhibitors

    , Article Journal of Pharmaceutical and Biomedical Analysis ; Volume 50, Issue 5 , 2009 , Pages 853-860 ; 07317085 (ISSN) Jalali Heravi, M ; Asadollahi Baboli, M ; Mani Varnosfaderani, A ; Sharif University of Technology
    Abstract
    In this work, the inhibitory activity of pyridine N-oxide derivatives against human severe acute respiratory syndrome (SARS) is predicted in terms of quantitative structure-activity relationship (QSAR) models. These models were developed with the aid of multivariate adaptive regression spline (MARS) and adaptive neuro-fuzzy inference system (ANFIS) combined with shuffling cross-validation technique. A shuffling MARS algorithm is utilized to select the most important variables in QSAR modeling and then these variables were used as inputs of ANFIS to predict SARS inhibitory activities of pyridine N-oxide derivatives. A data set of 119 drug-like compounds was coded with over hundred calculated... 

    Voltammetric studies of sumatriptan on the surface of pyrolytic graphite electrode modified with multi-walled carbon nanotubes decorated with silver nanoparticles

    , Article Talanta ; Volume 80, Issue 1 , 2009 , Pages 31-38 ; 00399140 (ISSN) Ghalkhani, M ; Shahrokhian, S ; Ghorbani Bidkorbeh, F ; Sharif University of Technology
    2009
    Abstract
    Multi-walled carbon nanotube decorated with silver nanoparticles (AgNPs-MWCNT) is used as an effective strategy for modification of the surface of pyrolytic graphite electrode (PGE). This modification procedure improved colloidal dispersion of the decorated MWCNTs in water, affording uniform and stable thin films for altering the surface properties of the working electrode. Robust electrode for sensing applications is obtained in a simple solvent evaporation process. The electrochemical behavior of sumatriptan (Sum) at the bare PGE and AgNPs-MWCNT modified PGE is investigated. The results indicate that the AgNPs-MWCNT modified PGE significantly enhanced the oxidation peak current of Sum. A... 

    Electrocatalytic determination of sumatriptan on the surface of carbon-paste electrode modified with a composite of cobalt/Schiff-base complex and carbon nanotube

    , Article Bioelectrochemistry ; Volume 81, Issue 2 , 2011 , Pages 81-85 ; 15675394 (ISSN) Amiri, M ; Pakdel, Z ; Bezaatpour, A ; Shahrokhian, S ; Sharif University of Technology
    2011
    Abstract
    The electrochemical oxidation of sumatriptan on the surface of carbon paste electrode modified with multi-walled carbon nanotube and cobalt methyl-salophen complex is studied by using cyclic voltammetry and polarization studies. The results indicate that the drug is irreversibly oxidized in a one electron oxidation mechanism. It was found that the peak potential shifted negatively with increasing pH, confirms that H + participate in the oxidation process. The electrode is shown to be very effective for the detection of sumatriptan in the presence of other biological reductant compounds. The prepared modified electrode exhibits a very good resolution between the voltammetric peaks of...