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    Analytical evaluation of average delay and maximum stable throughput along a typical two-way street for vehicular ad hoc networks in sparse situations

    , Article Computer Communications ; Volume 32, Issue 16 , 2009 , Pages 1768-1780 ; 01403664 (ISSN) Javanmard, A ; Ashtiani, F ; Sharif University of Technology
    2009
    Abstract
    Intermittent connectivity is an intrinsic feature of vehicular ad hoc networks (VANETs) in sparse situations. This type of network is in fact an example of delay and disruption tolerant networks (DTNs). In this paper, we focus on a typical two-way street and analytically evaluate the maximum stable throughput and the average delay for packet forwarding along the street. To this end, we map the mobility patterns of the vehicles with different speeds onto suitable parameters of a BCMP queueing network and derive the location density of vehicles. Then, we employ another queueing network in order to model opportunistic multi-hop packet forwarding along the street with respect to the... 

    An analytical model for evaluation of wireless mesh networks

    , Article 2008 International Symposium on Telecommunications, IST 2008, Tehran, 27 August 2008 through 28 August 2008 ; October , 2008 , Pages 295-300 ; 9781424427512 (ISBN) Hamidi Sepehr, F ; Ashtiani, F ; Sharif University of Technology
    2008
    Abstract
    Wireless mesh networks (WMNs) are well-promising future networks especially for ubiquitous connection to Internet. In this paper, we propose an analytical model in order to evaluate the maximum stable throughput of a WMN based on a simplified version of IEEE 802.11s MAC protocol. Our modeling approach is based on a multi-class open queueing network. In this respect, we map some of the important features of IEEE 802.11s MAC protocol, esp., its contention-based and contention-free periods onto different parameters of the proposed queueing network. By solving the related traffic equations and applying the stability condition, we determine the maximum stable throughput, i.e., the maximum packet... 

    High-level modeling approach for analyzing the effects of traffic models on power and throughput in mesh-based NoCs

    , Article Proceedings of the IEEE International Frequency Control Symposium and Exposition, 4 January 2008 through 8 January 2008, Hyderabad ; 2008 , Pages 415-420 ; 0769530834 (ISBN); 9780769530833 (ISBN) Koohi, S ; Mirza Aghatabar, M ; Hessabi, S ; Pedram, M ; VLSI Society of India ; Sharif University of Technology
    2008
    Abstract
    Traffic models exert different message flows in a network and have a considerable effect on power consumption through different applications. So a good power analysis should consider traffic models. In this paper we present power and throughput models in terms of traffic rate parameters for the most popular traffic models, i.e. Uniform, Local, HotSpot and First Matrix Transpose (FMT) as a permutational traffic model. We also select Mesh topology as the most prominent NoC topology and validate the presented models by comparing our results against simulation results from Synopsys Power Compiler and Modelsim From the comparison, we show that our modeling approach leads to average error of 2%... 

    SVNN: an efficient PacBio-specific pipeline for structural variations calling using neural networks

    , Article BMC Bioinformatics ; Volume 22, Issue 1 , 2021 ; 14712105 (ISSN) Akbarinejad, S ; Hadadian Nejad Yousefi, M ; Goudarzi, M ; Sharif University of Technology
    BioMed Central Ltd  2021
    Abstract
    Background: Once aligned, long-reads can be a useful source of information to identify the type and position of structural variations. However, due to the high sequencing error of long reads, long-read structural variation detection methods are far from precise in low-coverage cases. To be accurate, they need to use high-coverage data, which in turn, results in an extremely time-consuming pipeline, especially in the alignment phase. Therefore, it is of utmost importance to have a structural variation calling pipeline which is both fast and precise for low-coverage data. Results: In this paper, we present SVNN, a fast yet accurate, structural variation calling pipeline for PacBio long-reads... 

    SVNN: an efficient PacBio-specific pipeline for structural variations calling using neural networks

    , Article BMC Bioinformatics ; Volume 22, Issue 1 , 2021 ; 14712105 (ISSN) Akbarinejad, S ; Hadadian Nejad Yousefi, M ; Goudarzi, M ; Sharif University of Technology
    BioMed Central Ltd  2021
    Abstract
    Background: Once aligned, long-reads can be a useful source of information to identify the type and position of structural variations. However, due to the high sequencing error of long reads, long-read structural variation detection methods are far from precise in low-coverage cases. To be accurate, they need to use high-coverage data, which in turn, results in an extremely time-consuming pipeline, especially in the alignment phase. Therefore, it is of utmost importance to have a structural variation calling pipeline which is both fast and precise for low-coverage data. Results: In this paper, we present SVNN, a fast yet accurate, structural variation calling pipeline for PacBio long-reads... 

    Throughput Analysis in Multi Hop Cellular Networks

    , M.Sc. Thesis Sharif University of Technology Vaezi, Kaveh (Author) ; Ashtiani, Farid (Supervisor)
    Abstract
    OFDMA multi-hop cellular network (MCN) is the topic of a wide range of research today. In this thesis, we analyse this type of networks, regarding shadowing status, mobility patterns and different service requirements. In the multi-hop (MH) scenario, six fixed relays are set up in each cell, which split the cell into seven subcells. For mobility modeling, each subcell is split into several sub-regions. Mobile nodes are able to maintain at each sub-region with a random time distribution and migrate from it to one of its neighboring sub-regions. We also consider three types of services requiring specific number of subcarriers with specific BERs. The set of subcarriers is distributed among... 

    VLSI Architecture for MIMO Detectors in the Complex Domain

    , M.Sc. Thesis Sharif University of Technology Mahdavi, Mojtaba (Author) ; Vosoughi Vahdat, Bijan (Supervisor) ; Shabany, Mahdi (Supervisor)
    Abstract
    The implementation of high-order multiple-input multiple-output (MIMO) detectors in complex domain, which finds applications in advanced wireless standards such as WiMAX and Long Term Evolution (LTE) systems, has always been a challenge in the literature. To address this challenge, two novel detection algorithms with their high-throughput VLSI architectures for a 4×4, 64-QAM complex MIMO detector are proposed in this thesis. The proposed architectures can easily be extended to high-order constellation schemes. For the first algorithm Complexity analysis and the synthesis results in a 0.13μm CMOS technology show that compared to the reported VLSI implementations in the complex domain, the... 

    Cooperative Communications Based on Jointly Network Coding and Rateless Coding Approach and Their Analysis

    , M.Sc. Thesis Sharif University of Technology Mansourifard, Parisa (Author) ; Nasiri Kenari, Masoumeh (Supervisor)
    Abstract
    In recent years, coded cooperation has been considered as one of the best methods to cope with fading and at the same time to achieve channel coding gain. On the other hand, the idea of network coding has been introduced for increasing the efficiency of cooperative networks. In addition, it has been shown that only by jointly designing of network coding and channel coding, the capacity will be achievable. Also, to adjust the rate to the channel capacity without requiring the channel state information at the transmitter, Rateless coding has been proposed. In this thesis above techniques are combined to gain their advantages and to improve system performance. To this end, first we consider a... 

    Application of Simulation Optimization in Buffer Allocation Problem Using Genetic Algorithm and Simulated Annealing

    , M.Sc. Thesis Sharif University of Technology Ramezani Ali Abadi, Majid (Author) ; Kianfar, Farhad (Supervisor)
    Abstract
    Simulation optimization has been one of the most important topics in recent years. It is especially useful when the objective function cannot be computed directly or some of the parameters are stochastic. Buffer allocation problem is one of the important problems related to production lines. In this problem the objective is to determine the buffers between workstations so that the throughput is maximized. Non-linear and combinatorial nature of the problem, stochastic factors like machine breakdown or processing times and most importantly lack of a distinct relation for the objective function are the reasons of using simulation ... 

    Energy Harvesting in Wireless Communication Networks

    , Ph.D. Dissertation Sharif University of Technology Moradian, Masoumeh (Author) ; Ashtiani, Farid (Supervisor)
    Abstract
    In this dissertation, we focus on two types of EH cooperative networks. In the first type, the source and relay nodes access a shared channel according to a random access protocol. Also, they harvest energy from non-RF environmental resources. The relay node has data and energy buffers to store the packets of the source and the harvested energy, respectively. Our main goal is to find the optimal relaying protocol at the relay node. In this regard, the first type of the EH cooperative networks are investigated in two different scenarios. In the first one, the MAC channels of the nodes are independent of the applied policy at the relay node, and thus the throughput of the network is fixed.... 

    A Reconfigurable and Adaptive Shared-memory Architecture for GPUs

    , M.Sc. Thesis Sharif University of Technology Abbasitabar, Hamed (Author) ; Sarbazi Azad, Hamid (Supervisor)
    Abstract
    The importance of shared memory (scratchpad memory) in GPGPU programming, the memory size limits of GPGPUs and the influence of shared memory on overall performance of the GPGPU has led to its performance optimization. Moreover, the trend of new GPGPUs design shows that the ratio of shared memory to processing elements is going smaller. As a result, the limited capacity of shared memory becomes a bottleneck for a GPU to host a high number of thread blocks, limiting the otherwise available thread-level parallelism (TLP). In this thesis we introduced a reconfigurable and adaptive shared memory architecture for GPGPUs based on resource sharing which can be exploited for throughput improvement... 

    Analysis of Caching in Communication Networks

    , Ph.D. Dissertation Sharif University of Technology Rezaei, Fatemeh (Author) ; Hossein Khalaj, Babak (Supervisor)
    Abstract
    Caching has been widely considered an efficient way of reducing and balancing the growing traffic in communications networks in recent years. In this thesis, for the first time, the stochastic requests traffic model in communication networks is considered and a performance analysis is provided based on such a realistic assumption. In addition, we introduce new comprehensive performance metrics which simultaneously take into account, the cache hit probability, load on the bottleneck links, and requests arrival rates. The main contribution of this thesis is to present a system model based on queuing theory and provide an analysis of the stability, maximum stable throughput, load on the... 

    Delay and Throughput Analysis of Fiber-radio Networks Based on 5G Heterogeneous and NG-PON2

    , M.Sc. Thesis Sharif University of Technology Davari, Taha (Author) ; Salehi, Javad (Supervisor) ; Beyranvand, Hamzeh (Supervisor)
    Abstract
    In the future mobile network 5G will offer high speed and low delay but millimeter wave link are poor at penetrating into solid objects. Thus future network will be a hybrid of traditional sub-6GHz macrocells and denser 5G small cells. We develop a general analytical model to derive delay and throughput in this network. First we analyse the initial access delay which is very important in Internet of things and machine to machine communication. Then we go into data delay of network. With the foreseeable explosive growth of small cell deployment, backhaul has become the next big challenge in the next generation network. We analyse two option of fiber and millimeter wave. At the end we have end... 

    Performance Analysis of Flooding-based Broadcasting in Wireless Networks

    , Ph.D. Dissertation Sharif University of Technology Shah-Mansouri, Hamed (Author) ; Hossein Khalaj, Babak (Supervisor)
    Abstract
    Broadcasting in wireless ad hoc networks serves many important tasks such as data dissemination and route establishment in which one node sends its data to all other network nodes. The most popular form of broadcasting adopted by many ad-hoc protocols is flooding. In flooding, each node receiving a packet from a neighboring node rebroadcasts it exactly once. Wide adoption of flooding for broadcasting traffic is mainly due to its simplicity. The importance of performance analysis of flooding lies on its aforementioned popularity. The parameters of interest in analysis of flooding are network coverage, energy consumption and broadcast throughput while network coverage is the average percentage... 

    General Review of the Gamma Irradiators for the Purpose of Desing Improvement of Multipurpose Systems

    , M.Sc. Thesis Sharif University of Technology Hemati, Azam (Author) ; Sohrabpour, Mostafa (Supervisor)
    Abstract
    Ionizing radiation can modify physical, chemical and biological properties of the irradiated materials. At present, the principal industrial applications of radiation are sterilization of health care products including pharmaceuticals, irradiation of food and agriculture products and materials modification. In the above application the wide range of the required doses together with different product densities require spatial mechanical design of the irradiators to be able to properly handle the specified tasks. In the multipurpose irradiators the design of system and positioning of the source must be done in such a way that a nearly optimum dose distaition in the product boxes in... 

    Throughput Analysis of Routing Algorithms in 802.11s-Based Wireless Mesh Networks

    , M.Sc. Thesis Sharif University of Technology Farhang, Rouhollah (Author) ; Ashtiani, Farid (Supervisor)
    Abstract
    Wireless Mesh Networks (WMNs) can be considered as the result of cooperation among two ad hoc networks, one composed of Mesh Points (MPs) and another one composed of Mesh Clients (MCs) as well as corresponding Access (Mesh) Points. Each one has its own functions and properties. This cooperation results in a flexible network that to fully demonstrate its potentials, requires special routing algorithms and access schemes.Here, we study and analyze three routing algorithms in IEEE 802.11s-based WMNs from throughput point of view. To this end, each node in the network is modeled by a queue during Contention-Free Periods (CFPs). During Contention-Based Period, however, to simplify modeling, we... 

    , M.Sc. Thesis Sharif University of Technology karbalai Ghareh, Alireza (Author) ; Nasiri Kenari, Masoumeh (Supervisor)
    Abstract
    In the recent years, the cooperative communications based on Network Coding have received significant attentions to simultaneously improve the diversity order and the network throughput. In this thesis, a new cooperative transmission scheme for the cooperative relay-based networks called “Convolutional Network-Coded Cooperation” (CNCC) is proposed, in which a systematic convolutional code is used in the network level. In this scheme, the systematic packets are directly transmitted by the sources, and the parity packets, calculated based on the received sources’ packets, are transmitted by the relays. The proposed CNCC scheme is considered in the cooperative networks including N sources, M... 

    UEP CodesBased Cooperative Network With Different User Priorities Approach and Their Analysis

    , M.Sc. Thesis Sharif University of Technology Mohammadkhani Razlighi, Mohsen (Author) ; Nasiri-kenari, Masoumeh (Supervisor) ; Behroozi, Hamid (Supervisor)
    Abstract
    In recent years, coded cooperation has been considered as one of the best methods to cope with fading and at the same time to achieve channel coding gain. There is a special case of cooperative networks that provide different level of user priority. Among all methods for creating user priority our motivation is to use of UEP codes for this propose. UEP codes are a special case of channel codes that provide different level of protection for message. It means that some part of message that has more protection it has less error. First we review all type of UEP codes and compare them in term of probability of bit error on the AWGN channel. And best code will be choosing for applying to this... 

    High-Throughput Determination of Pesticide Residues by Solid-Phase Microextraction and Micro-Solid Phase Extraction on 96-Well Plate

    , Ph.D. Dissertation Sharif University of Technology Eshaghi, Ali (Author) ; Bagheri, Habib (Supervisor) ; Es-haghi, Ali ($item.subfieldsMap.e)
    Abstract
    Novel high-throughput device and their applications as the microextraction systems for pesticide multiresidue determination is the centre of this research. 96 extracting unit based on solid phase microextraction and micro-Solid phase extraction were constructed and applied for high-throughput extraction.
    In the first work, a high-throughput SPME on 96-well plate together with gas chromatography-mass spectrometry was developed for the determination of pesticide residues in cucumber samples. A home-made Teflon block consisting ninety-six holes was constructed to 96 SPME fibers being positioned in. SPME fibers consisted of stainless steel rods with a 1.0 cm polydimethylsiloxane tubing... 

    Numerical Investigation of Droplet Generation in a Microfluidic Flow-Focusing Junction Aiming High-Throughput Droplet Generation

    , M.Sc. Thesis Sharif University of Technology Mardani Boldaji, Fatemeh (Author) ; Taghipoor, Mojtaba (Supervisor) ; Hosseini, Vahid (Supervisor)
    Abstract
    Droplet microfluidic platform generates monodisperse droplets in a desired size through immiscible multiphase flows inside microchannels. Droplets are individual reactor and can be used for bio(chemical) analyses. Also, for materials fabrication, droplet microfluidics offers a versatile platform for generation of nano- or micro-sized particles and microcapsules that are widely used in drug delivery. In addition to the monodispersity, high-throughput generation is also necessary in many applications. Therefore, droplets must be formed in stable regimes (dripping and squeezing) in the highest possible frequency. In this study, the flow-focusing geometry, which is the most common geometry in...