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MRI Reconstruction using Partial k-Space Scans
, M.Sc. Thesis Sharif University of Technology ; Fatemizadeh, Emadeddin (Supervisor)
Abstract
Based on Shannon theory, continuous-time band-limited signals are guaranteed to be recovered per-fectly subject to sampling with Nyquist rate. Due to inherently slow MRI sensors, sampling with Nyquist rate excruciatingly increases the scan time. This leads to patient inconvenience along with degradation in image quality caused by geometrical distortions.In recent years, Compressed Sensing (CS) has been introduced as an alternative to the Nyquist theory for the acquisition of sparse or compressible signals that can be well approximated by K ≪ N coeffi-cients from a N-dimensional basis. In CS theory, measurements are actually inner products of signal x with a base vector ϕi. In Fourier encoded...
Online undersampled dynamic MRI reconstruction using mutual information
, Article 2014 21st Iranian Conference on Biomedical Engineering, ICBME 2014 ; 17 February , 2014 , Pages 241-245 ; ISBN: 9781479974177 ; Ghaffari, A ; Fatemizadeh, E ; Sharif University of Technology
2014
Abstract
We propose an algorithm based on mutual information to address the problem of online reconstruction of dynamic MRI from partial k-space measurements. Most of previous compressed sensing (CS) based methods successfully leverage sparsity constraint for offline reconstruction of MR images, yet they are not used in online applications due to their complexities. In this paper, we formulate the reconstruction as a constraint optimization problem and try to maximize the mutual information between the current and the previous time frames. Conjugate gradient method is used to solve the optimization problem. Using Cartesian mask to undersample k-space measurements, the proposed method reduces...
The use of halophytic plants for salt phytoremediation in constructed wetlands
, Article International Journal of Phytoremediation ; Volume 19, Issue 7 , 2017 , Pages 643-650 ; 15226514 (ISSN) ; Borghei, S. M ; Vossoughi, M ; Sharif University of Technology
Taylor and Francis Inc
2017
Abstract
This research studied the use of constructed wetlands (CWs) to reduce water salinity. For this purpose, three halophytic species of the Chenopodiaceae family (Salicornia europaea, Salsola crassa, and Bienertia cycloptera) that are resistant to saline conditions were planted in the CWs, and experiments were conducted at three different salinity levels [electrical conductivity (EC)~2, 6, 10 dS/m]. EC and concentrations of calcium (Ca), magnesium (Mg), sodium (Na), and chlorine (Cl) were measured before and after phytoremediation with a retention time of 1 week. The results suggested that these plants were able to grow well and complete their life cycles at all the salinity levels within this...
On-line nonlinear dynamic data reconciliation using Extended Kalman Filtering: Application to a distillation column and a CSTR
, Article Iranian Journal of Chemistry and Chemical Engineering ; Volume 28, Issue 3 , 2009 , Pages 1-14 ; 10219986 (ISSN) ; Mehrabani Zeinabad, A ; Bozorgmehry Boozarjomehry,R ; Sharif University of Technology
2009
Abstract
Extended Kalman Filtering (EKF) is a nonlinear dynamic data reconciliation (NDDR) method. One of its main advantages is its suitability for on-line applications. This paper presents an on-line NDDR method using EKF. It is implemented for two case studies, temperature measurements of a distillation column and concentration measurements of a CSTR. In each time step, random numbers with zero mean and specified variance were added to simulated results by a random number generator. The generated data are transferred on-line to a developed data reconciliation software. The software performs NDDR on received data using EKF method. Comparison of data reconciliation results with simulated...
Data reconciliation: Development of an object-oriented software tool
, Article Korean Journal of Chemical Engineering ; Volume 25, Issue 5 , 2008 , Pages 955-965 ; 02561115 (ISSN) ; Mehrabani Zeinabad, A ; Boozarjomehry Boozarjomehry , R ; Sharif University of Technology
2008
Abstract
Object-oriented modeling methodology is used for encapsulating different methods and attributes of data reconciliation (DR) in classes. Classes which are defined for DR, cover steady-state, dynamic, linear and nonlinear DR problems. Two main classes are Constraints and DR and defined for manipulating constraints and general DR problem. The remaining classes are derived from these two classes. A class namely DDRMethod is developed for encapsulating all common attributes and methods needed for any DDR method. Developed DR software and the method of performing dynamic DR are discussed in this paper. Two illustrative examples of Extended Kalman Filtering and artificial neural networks are used...
Modeling the Kinetics of Sulfur Oxides Adsorption-desorption on a Pt/γ-Al2O3 Catalyst as Diesel Oxidation Catalyst (DOC)
, M.Sc. Thesis Sharif University of Technology ; Hamzeh Louyan, Tayyebeh (Supervisor)
Abstract
Sulfur oxides are categorized as one of the most important poisoning and activity-reducer groups acting on the catalytic converters present in the exhaust treatment systems. In the present work, interactions of the SOX species with diesel oxidation catalysts (DOCs) are investigated by implementing a kinetic modeling approach. Experimental data obtained from a catalyst of this type, i.e., Pt/γ-Al2O3, was employed and a multi-step microkinetic model was developed in Matlab 2018b® to proxy the poisoning effect of the adsorption of surface sulfur species and their desorption behavior. The microkinetic model was run to describe the individual SO2 and SO3 adsorption-desorption process using the...
Sole versus dual-sourcing under order dependent lead-times and prices [electronic resource]
, Article Computers And Operations Research, Published in: Elsevier Journals ; Volume 36, Issue 12, December 2009, Pages 3272–3280 ; Eshghi, Kourosh ; Sharif University of Technology
Abstract
In this paper, we consider a dual-sourcing model with constant demand and stochastic lead times. Two suppliers may be different in terms of purchasing prices and lead-time parameters. The ordering takes place when the inventory level depletes to a reorder level, and the order is split among two suppliers. Unlike previous works in the order splitting literature, the supply lead time between vendor and buyer as well as unit purchasing prices is considered to be order quantity dependent. The proposed model finds out the optimal reorder point, order quantity and splitting proportion, using a solution procedure. Numerical results show that neglecting the relationship between ordering batch size...
Human serum protein adsorption onto synthesis nano-hydroxyapatite
, Article Protein Journal ; Volume 31, Issue 2 , February , 2012 , Pages 150-157 ; 15723887 (ISSN) ; Massah Bidgoli, M ; Behrashi, M ; Mohsen Nia, A ; Sharif University of Technology
2012
Abstract
Adsorption of human serum proteins (Albumin and total protein) onto high purity synthesis nano-hydroxyapatite (HA), Ca 10(PO 4) 6(OH) 2, has been studied in a wide temperature range by UV-visible spectrophotometer. Adsorption isotherm is basically important to describe how solutes interact with adsorbent, andiscriticalinoptimizing the use of adsorbent. Inthe present study, the experimental results werefitted tothe Langmuir, Freundlich, Temkin and Dubinin-Radushkevich (DR) models to obtain the characteristic parameters of each model and square of the correlation coefficients (R 2). According to the results, the DR isotherm model had the best agreement with the experimental data. The effect of...
Effective Permeability of Isotropic Overlapping Sandbodies in 2D Using Percolation Theory
, M.Sc. Thesis Sharif University of Technology ; Masihi, Mohsen (Supervisor)
Abstract
Permeability is an essential parameter used for reservoir evaluation, simulation and management to optimize oil recovery. The conventional approach to estimate reservoir connectivity, conductivity, sweep efficiency and other critical information for decision-making is to build detailed geological models, which are then upscaled to a coarser grid where flow simulations are run. However, this takes many hours to be carried out even for a single realization practically. In practice, a very small number of realizations are considered and consequently the true uncertainty in the results is very poorly estimated. In this study, a statistical model of isotropic overlying sandbodies is used to...
A Metabonomics Study of Samples of Different Diseases: Investigation of Linear and Non-Linear Model by Nuclear Magnetic Resonance
, Ph.D. Dissertation Sharif University of Technology ; Tafazzoli, Mohsen (Supervisor)
Abstract
Metabonomics is a quantitative measurement of time dependent metabolic interactions for living systems in response to the pathological or genetic variations. NMR spectroscopy has emerged as a key tool for understanding metabolic processes in living systems. In this project, the study of metabolomics was performed as classification and regression on samples of parkinson’s disease, multiple sclerosis disease, celiac disease and crohn’s disease. In classification part, various methods were applied using optimal parameters.classification methods in Parkinson’s disease, multiple sclerosis disease, celiac disease and crohn’s disease were RF, CART, PLS-DA, RF and RF respectively. Based on the...
Determination of Parameters Affecting the Linear Seismic Evaluation of Gravity Dams Using Nonlinear Analysis
, M.Sc. Thesis Sharif University of Technology ; Ghaemian, Mohsen (Supervisor)
Abstract
Gravity dams are solid concrete structures that maintain their stability against design loads from the geometric shape and the mass and strength of the concrete. Because of their critical role in supplying portable and agricultural water and problems which would happen if they broke, it is required to consider their stability and keep them in safe conditions. They should be able to continue their function after a disaster such as earthquake. But most of them are aged dams with some have been built near faults. Indeed, there are some concerns regarding the performance of these dams under the effect of seismic loads. This research deals with performance evaluation of concerete gravity . The...
Numerical Analysis of Soil-Nailed Walls in Seismic Condition
,
M.Sc. Thesis
Sharif University of Technology
;
Haeri, Mohsen
(Supervisor)
Abstract
Soil nailing is an in-situ technique of mechanically stabilizing soil masses which has been used in France, Germany, United states, and recently in Iran. A review of literature shows that Soil-Nailed walls have performed well during strong ground motions in comparison with the gravity retaining structures. After the 1989 Loma Prieta earthquake, minor signs of distress or corresponding deformation were found on the Soil-Nailed walls, indicating excellent performance of such structures during moderate and strong shakings. These observations indicate that Soil-Nailed walls have an inherent satisfactory seismic response. This has been attributed to the intrinsic flexibility of the Soil-Nailed...
Collapsible Behavior of Gorgan Loess Using Odeometer
, M.Sc. Thesis Sharif University of Technology ; Haeri, Mohsen (Supervisor)
Abstract
In nature, there are types of soils that when goinging under stress at constant moisture, or increase of moisture at constant stress, or change of both characters, they show a sudden and high level decrease in their volume. These type of soils are named as Collapsible soils. Iran is one of the countries that at some parts of its land collapsible soils are found. In this research by using of laboratory equipments, the volume change behavior of collapsible loess soils of Gorgan plain (North of Iran) is evaluated under increase of water content and inundation stress. In these experiments, the usual odeometer cell has been used for exploring the behaviour of collapsibility and volume change of...
The Effect of Cementation by Lime on Collapsible Soils Behavior Using Suction Controlled Oedometer Device Case Study: Loess of Gorgan
, M.Sc. Thesis Sharif University of Technology ; Haeri, Mohsen (Supervisor)
Abstract
Collapsible soils such as loess, which are naturally found unsaturated, are kind of problematic soils that undergo sudden and noticeable decrease in volume under increasing stress at constant moisture, increasing moisture at constant stress, or increase in both of them. This kind of soil can be found in some parts of Iran such as plain of Gorgan. To fulfill the main purpose of this study, evaluating the effect of cementation on collapse behavior of loess of Gorgan, some oedometer tests under controlled matric suction were performed on reconstituted samples without and with lime. The lime was added for stabilizing of the collapsible materials and the amount was chosen to be %3 by weight of...
An Experimental Investigation of Three-Phase Flow of water-Oil-Gas Mixture Through Water-wet Sandstone
, M.Sc. Thesis Sharif University of Technology ; Masihi, Mohsen (Supervisor)
Abstract
Accurate prediction of relative permeability for various reservoir rocks at various saturation conditions has been of concern for a long time in petroleum industry. Relative permeability is known as one of the most significant parameters in simulation of actual multi-phase flow through porous media during life-time of a hydrocarbon reservoir. In addition, it plays important role in oil production and well completion. Direct experimental measurement in order to determine relative permeability of porous rock has long been recorded in petroleum related literature. However, empirical methods for determining relative permeability are becoming more widely used, particularly with the advent of...
Introducing a Set of Material Strain Measures in Non-Linear Kinematics of Micropolar Continuum Mechanics and Determining their Time Rates
, M.Sc. Thesis Sharif University of Technology ; Asghari, Mohsen (Supervisor)
Abstract
The concept of generalized strains is a well-established subject in the classical continuum mechanics. The characteristics and various applications of the generalized strains have been the point of interest of many researchers in the classical continuum mechanics. The aim of this thesis is the introduction of generalized strains in the micropolar theory, as a non-classical continuum theory. A set of generalized strains is suggested for the deformation of macro-elements. Moreover, a set of generalized strains is proposed for the micro-structures. Since the rate of strains possesses a significant importance in the constitutive equations of nonlinear analysis of solids, expressions for the rate...
Evaluation of the Behaviour of Collapsible Soils in Saturated and Unsaturated Oedometer Tests – Case Study of Gorgan Loess
, M.Sc. Thesis Sharif University of Technology ; Haeri, Mohsen (Supervisor)
Abstract
Collapsible soils are kinds of problematic soils which are susceptible to large and sudden reduction in volume upon wetting. A manifest kind of these soils is loess; catastrophic settlement of structures which are built upon it has been observed when the soil becomes wet. In this investigation the collapse potential of samples of loess taken from Gorgan, Golestan, Iran, has been studied by using unsaturated odometer tests under controlled matric suction. To this end, two modified odometer apparatus with the capability of controlling the matric suction, have been designed and developed. Undisturbed samples of soil have been tested under K0 condition, while the matric suction, volumetric...
Performance Evaluation of Concrete Gravity Dam Using Crest Displacement by Nonlinear Analysis
, M.Sc. Thesis Sharif University of Technology ; Ghaemian, Mohsen (Supervisor)
Abstract
Concrete gravity dams are one of the most important infrastructures therefore their performance under seismic load is an important issue of concern for dam owners. It is necessary that these infrastructures to be able to continue their function after a disaster such as earthquake, as any damage can cause huge cost. For analysis of dams linear and nonlinear analyses are used. Because even operating loads will create cracks in the body of the dam, dam behavior can not always be considered linear. It is remarkable that these surface cracks can join together under seismic loads and this question the safety of dams. It is important to note that nonlinear analysis of concrete gravity dams is...
Physical Modeling of Effect of Liquefaction-Induced Lateral Spreading on Single Piles
, M.Sc. Thesis Sharif University of Technology ; Haeri, Mohsen (Supervisor)
Abstract
Pile foundations suffered severe damages during the past earthquakes in all around the world. These damages were more severe in laterally spreading grounds and they mostly have been observed in gently sloping grounds and coastal areas. In these cases, Pile foundations not only are subjected to structures inertial loads and kinematic loads of liquefied soil but also lateral spreading intensifies damages. Thus, in the recent decade, several researches have been conducted to investigate the behavior of pile foundations in liquefiable and laterally spreading grounds, however, some uncertainties still remain in modeling of soil-pile interaction. In this study, the effects of liquefaction- induced...