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Fully Automatic Segmentation of Pelvic CT Images based on Deep Learning Methods
, M.Sc. Thesis Sharif University of Technology ; Hosseini, Abolfazl (Supervisor)
Abstract
The initial step in radiotherapy treatment planning involves delineating the clinical target volumes (CTVs) and organs at risk (OARs). However, manual contouring is a time-consuming, labor-intensive, and subjective process. This study explores the potential of utilizing convolutional neural networks (CNNs) as an automated segmentation tool and an alternative to manual delineation. 218 Computed Tomography (CT) scans were gathered from two local hospitals in Tehran and the Whole Abdominal Organ Dataset (WORD). We employed ResUNet, a variant of UNet, as well as the original UNet from the Medical Open Network for AI (MONAI), an open-source framework for Deep Learning (DL) in healthcare imaging,...
Bio-inspired nanostructured sensor for the detection of ultralow concentrations of explosives [electronic resource]
, Article Journal of Angewandte Chemie International Edition ; 29 May 2012, Volume 51, Issue 22, P.5334-5338 ; Simchi, A. (Abdolreza) ; Tamjid Shabestary, Elnaz ; Hartwig, Thomas ; Sharif University of Technology
Abstract
TNT: Silicon microcantilevers modified with a three-dimensional layer of vertical titanium dioxide nanotubes can be used in micromechanical sensors with optical signal detection to detect low levels of explosives such as 2,4,6-trinitrotoluene (TNT) in the gas phase, even in the presence of other volatile impurities such as n-heptane and ethanol
The optimization of gas allocation to a group of wells in a gas lift using an efficient Ant Colony Algorithm (ACO)
, Article Energy Sources, Part A: Recovery, Utilization and Environmental Effects ; Vol. 36, Issue. 11 , 2014 , Pages 1234-1248 ; ISSN: 15567036 ; Ghotbi, C ; Aminshahidy, B ; Sharif University of Technology
2014
Abstract
When the reservoir energy is too low for the well to flow, or the production rate desired is greater than the reservoir energy can deliver, using some kind of artificial lift method to provide the energy to bring the fluid to the surface, seems to be necessary. Continuous flow gas lift is one of the most common artificial lift methods widely used in the oil industry during which, at appropriate pressure, gas is injected in a suitable depth into the tubing to gasify the oil column, and thus assist the production. Each well has an optimal point at which it will produce the most oil. In ideal conditions, at which there is no limitation in the total amount of available gas, a sufficient amount...
Optimization of gas allocation to a group of wells in gas lift in one of the Iranian oil fields using an efficient hybrid genetic algorithm (HGA)
, Article Petroleum Science and Technology ; Volume 31, Issue 9 , 2013 , Pages 949-959 ; 10916466 (ISSN) ; Ghotbi, C ; Aminshahidy, B ; Sharif University of Technology
2013
Abstract
A hybrid genetic algorithm (HGA) was introduced to allocate optimum amount of gas. This method was applied to a group of wells in gas lift in the case of availability limited amount of gas. For testing the ability of the proposed HGA, the results of this work with those of previous works in a field with six wells were compared. Then for an Iranian southern west oil field with nine wells, gas allocation is performed using different amount of available gas. The results show that the introduced method (HGA) is very efficient tool in gas allocation issue
Design and Fabrication of Analog to Digital Converter for On Chip Measurement in Industrial Applications in 180nm-HV BCD CMOS Proccess
,
M.Sc. Thesis
Sharif University of Technology
;
Medi, Ali
(Supervisor)
Abstract
Increasing demand for digital systems has led to developing signal processing in the digital domain. For this purpose, Analog to Digital Converters is used to convert analog signals to digital ones. Apart from that, by decreasing the size of transistors, it has been possible to implement the system on a chip that needs communication between analog and digital signals. The designed converter in this project is suitable for instrumentation purposes and especially for use in the control loop of a DCDC digitally voltage converter. ADC architectures are mainly classified into two groups attributed with high bandwidth or with high resolution. Nature of onchip measurement requires high...
Random walk-percolation-based modeling of two-phase flow in porous media: Breakthrough time and net to gross ratio estimation
, Article Physica A: Statistical Mechanics and its Applications ; Vol. 406, issue , July , 2014 , p. 214-221 ; ISSN: 03784371 ; Masihi, M ; Ghaedi, M ; Sharif University of Technology
2014
Abstract
Fluid flow modeling in porous media has many applications in waste treatment, hydrology and petroleum engineering. In any geological model, flow behavior is controlled by multiple properties. These properties must be known in advance of common flow simulations. When uncertainties are present, deterministic modeling often produces poor results. Percolation and Random Walk (RW) methods have recently been used in flow modeling. Their stochastic basis is useful in dealing with uncertainty problems. They are also useful in finding the relationship between porous media descriptions and flow behavior. This paper employs a simple methodology based on random walk and percolation techniques. The...
Surface Modification of Bacterial Cellulose-Reinforced Keratin Nanofibers using Pluronic/Gum Tragacanth Hydrogel Nanoparticles Produced by Concurrent gel Electrospray/Polymer Electrospinning Method
, M.Sc. Thesis Sharif University of Technology ; Simchi, Abdolreza (Supervisor) ; Tamjid, Elnaz (Supervisor)
Abstract
In this work, wool keratin/polyethylene oxide (PEO) nanofibrous scaffolds were fabricated by electrospinning method. Bacterial cellulose nanofibrils (BCNFs) were embedded in the electrospun keratin/PEO nanofibers. Incorporation of BCNFs into the nanofibers enhances their hydrophilicity, mechanical properties and cell viability, adhesion and proliferation. Water contact angle of the nanofibers decreased from 126˚ to 83˚by addition of 1 wt % BCNFs. A thermogelling hydrogel based on carboxylated pluronic (Pl-COOH) and gum tragacanth (GT) was fabricated and polymer conjugation was confirmed by FTIR and H-NMR spectroscopy. Morphological and viscoelastic properties of GT-grafted Pl-COOH hydrogels...
Generation and Optimization of High-order Harmonics in the Interaction of Laser with N2O Molecule
, M.Sc. Thesis Sharif University of Technology ; Sadighi-Bonabi, Rasoul (Supervisor) ; Irani, Elnaz (Co-Supervisor)
Abstract
The X-ray attosecond pulses have many useful applications for studying atomic and sub-atomic scales phenomena in attosecond scale duration. Generation and optimization of high-order harmonics is an efficient way to produce such attosecond pulses which are studied in this thesis. There are several limitations in the attosecond pulse generation such as low efficiency of high-order harmonics, long duration of output pulses and the impossibility of producing an attosecond pulse with any desired wavelength in the x-ray region. Therefore, more investigations into high harmonic generation and fully control and optimization of this process is significant. In this thesis, high harmonic generation...
Application of genetic algorithm for optimization of separator pressures in multistage production units
, Article Chemical Engineering Communications ; Vol. 201, issue. 7 , 2014 , p. 926-938 ; Ebrahimi, A. N ; Pishvaie, M. R ; Sharif University of Technology
2014
Abstract
In this article, a genetic algorithm is used to optimize the separator pressures in a multistage crude oil and multistage gas condensate production unit with four and three separators respectively. This leads to the generation of more accurate results for the quality and quantity of oil remaining in the stock tank for both crude oil and gas condensate production units. Genetic-based optimized pressures for crude oil separators resulted in 1.8% and 2% enhancement in oil remaining in the stock tank for summer and winter respectively. API gravity of the stock tank oil was improved 2.4% in summer and 2.2% in winter. For the gas condensate production unit, optimized pressures can enhance by 8.6%...
Investigation of online detected partial discharges in power transformer
, Article 2008 Australasian Universities Power Engineering Conference, AUPEC 2008, Sydney, NSW, 14 December 2008 through 17 December 2008 ; April , 2008 ; 9781424441624 (ISBN) ; Vakilian, M ; Parvin, V ; Ghaedi, A ; Sharif University of Technology
2008
Abstract
In this paper some advantage of online monitoring in power transformer and the sensors that can be used for partial discharge detection are described. Several detected PD in one power transformer and one distribution transformer are depicted. Matlabs wavelet package is employed to de-noise the recorded signals. As it appear from the captured and the denoised signals, PD signals in an aged power transformer are often enough large that can be easily detected through the noisy measured signals. By examination of the frequency spectrum of several PD signal in this paper it is obvious that this signal contain two major frequency band, one under 1 MHz and the other one between 7 to 9 MHz. © 2008...
Sensitive Detection and Quantification of Nitrite Ions by Metal-organic Frameworks/Gold Nanocomposites
, M.Sc. Thesis Sharif University of Technology ; Simchi, Abdoolreza (Supervisor) ; Tamjid Shabestari, Elnaz (Supervisor)
Abstract
Nitrite (〖NO〗_2^-) anions are ubiquitous within the physiological, industrial, environmental, and food industries. The potential toxicity risk of these inorganic compounds has well been recognized; thus, the precise detection of these ions by developing reliable and high-throughput analytical methods is crucial for health and environment security. In this study, we present a reagentless electrochemical biosensor using cobalt-based metal-organic frameworks (ZIF-67) and gold nanoparticles (Au NPs) for determination of nitrite ions. The developed biosensor provides the advantages of MOF properties including high surface area, hierarchical porosity, and tunable functionalities along with high...
Fabrication of 3D Graphene/Gold Porous Electrode for Biosensing Applications
, M.Sc. Thesis Sharif University of Technology ; Simchi, AbdolReza (Supervisor) ; Tamjid Shabestari, Elnaz (Supervisor)
Abstract
Today, the use of carbon nanostructures hybridized with noble metals has attracted considerable attention for the fabrication of bio-electrochemical sensors. Since the specific surface area has an immense effect on the sensing response, three-dimensional structures of graphene have a great capability to utilize in these sensors. In this research, three-dimensional graphene was provided on the porous nickel foam by chemical vapor deposition technique. By evaluation of raman spectroscopy, the time period of 20 minutes for solving of the carbon atoms into the nickel foam was selected as the main parameter of optimized conditions for the synthesis of graphene. Afterward, production of few-layer...
A Deep Learning Approach to Classify Motor Imagery Based on The Combination of Discrete Wavelet Transform and Convolutional Neural Network for Brain Computer Interface System
, M.Sc. Thesis Sharif University of Technology ; Selk Ghafari, Ali (Supervisor) ; Zabihollah, Abolghssem (Supervisor)
Abstract
A Brain-Computer Interface (BCI) is a communication system that does not need any peripheral muscular activity. The huge goal of BCI is to translate brain activity into a command for a computer. One of the most important topics in the brain-computer interface is motor imagery (MI), which shows the reconstruction of subjects. The electrical activities of the brain are measured as electroencephalogram (EEG). EEG signals behave as low to noise ratio also show the dynamic behaviors.In the present work, a novel approach has been employed which is based on feature extraction with discretion wavelet transform (DWT), support vector machine (SVM), Artificial Neural Network (ANN) and Convolutional...
Reliability modeling of run-of-the-river power plants in power system adequacy studies
, Article IEEE Transactions on Sustainable Energy ; Vol. 5, issue. 4 , 2014 , p. 1278-1286 ; ISSN: 19493029 ; Fotuhi-Firuzabad, M ; Aminifar, F ; Ghaedi, A ; Sharif University of Technology
2014
Abstract
Deployment of renewable energies for the electricity generation is on the rise around the world, among which is the run-of-the-river (ROR) power plant whose output power is variable throughout the year depending on the water flow of the respective river. The inherent uncertainty associated with renewable energy resources calls for new stochastic modeling approaches to measure the impacts of using these energies on the power system performance. This paper develops an analytical reliability model for ROR power plants. The model is based on the state-space analysis and is devised with the intention of being used in adequacy studies of power systems. Failure of related components and the...
Incorporating large photovoltaic farms in power generation system adequacy assessment
, Article Scientia Iranica ; Vol. 21, issue. 3 , 2014 , p. 924-934 ; 10263098 ; Abbaspour, A ; Fotuhi-Friuzabad, M ; Parvania, M ; Sharif University of Technology
2014
Abstract
Recent advancements in photovoltaic (PV) system technologies have decreased their investment cost and enabled the construction of large PV farms for bulk power generations. The output power of PV farms is affected by both failure of composed components and solar radiation variability. These two factors cause the output power of PV farms be random and different from that of conventional units. Therefore, suitable models and methods should be developed to assess different aspects of PV farms integration into power systems, particularly from the system reliability viewpoint. In this context a reliability model has been developed for PV farms with considering both the uncertainties associated...
Integration of adaptive neuro-fuzzy inference system, neural networks and geostatistical methods for fracture density modeling
, Article Oil and Gas Science and Technology ; Vol. 69, issue. 7 , 2014 , pp. 1143-1154 ; ISSN: 12944475 ; Kadkhodaie-Ilkhchi, A ; Sharghi, Y ; Ghaedi, M ; Sharif University of Technology
2014
Abstract
Image logs provide useful information for fracture study in naturally fractured reservoir. Fracture dip, azimuth, aperture and fracture density can be obtained from image logs and have great importance in naturally fractured reservoir characterization. Imaging all fractured parts of hydrocarbon reservoirs and interpreting the results is expensive and time consuming. In this study, an improved method to make a quantitative correlation between fracture densities obtained from image logs and conventional well log data by integration of different artificial intelligence systems was proposed. The proposed method combines the results of Adaptive Neuro-Fuzzy Inference System (ANFIS) and Neural...
Tissue growth into three‐dimensional composite scaffolds with controlled micro‐features and nanotopographical surfaces [electronic resource]
, Article Journal of Biomedical Materials Research Part A ; October 2013, Vol. 101, Issue 10, Pages 2796-2807 ; Simchi, A. (Abdolreza) ; Dunlop, John W. C ; Fratzl, Peter ; Bagheri, R ; Vossoughi, M ; Sharif University of Technology
Abstract
Controlling topographic features at all length scales is of great importance for the interaction of cells with tissue regenerative materials. We utilized an indirect three-dimensional printing method to fabricate polymeric scaffolds with pre-defined and controlled external and internal architecture that had an interconnected structure with macro- (400-500 μm) and micro- (∼25 μm) porosity. Polycaprolactone (PCL) was used as model system to study the kinetics of tissue growth within porous scaffolds. The surface of the scaffolds was decorated with TiO2 and bioactive glass (BG) nanoparticles to the better match to nanoarchitecture of extracellular matrix (ECM). Micrometric BG particles were...
Toward a comprehensive model of large-scale dfig-based wind farms in adequacy assessment of power systems
, Article IEEE Transactions on Sustainable Energy ; Vol. 5, issue. 1 , 2014 , p. 55-63 ; ISSN: 19493029 ; Abbaspour, A ; Fotuhi-Firuzabad, M ; Moeini-Aghtaie, M ; Sharif University of Technology
2014
Abstract
With the current focus on energy and environment, efficient integration of renewable energies, especially wind energy into power systems, is becoming essential. Furthermore, to fully capture wind potentials and to recognize the unique characteristics associated with wind energy in power systems adequacy analysis, a profound inquiry is required. In this way, this paper tries to establish a comprehensive analytical approach for reliability modeling of doubly-fed induction generator (DFIG)-based wind farms. First, the most impressive components of wind turbines are introduced. It then continues with integrating developed state space model of wind turbines and their production uncertainties,...
History matching of naturally fractured reservoirs based on the recovery curve method
, Article Journal of Petroleum Science and Engineering ; Vol. 126, issue , February , 2015 , p. 211-221 ; ISSN: 09204105 ; Masihi, M ; Heinemann, Z. E ; Ghazanfari, M. H ; Sharif University of Technology
2015
Abstract
The discrete fracture network (DFN) and Multiple-Continua concept are among the most widely used methods to model naturally fractured reservoirs. Each faces specific limitations. The recently introduced recovery curve method (RCM) is believed to be a compromise between these two current methods. In this method the recovery curves are used to determine the amount of mass exchanges between the matrix and fracture mediums. Two recovery curves are assigned for each simulation cell, one curve for gas displacement in the presence of the gravity drainage mechanism, and another for water displacement in the case of the occurrence of the imbibition mechanism. These curves describe matrix-fracture...
Toward a comprehensive model of large-scale dfig-based wind farms in adequacy assessment of power systems
, Article IEEE Transactions on Sustainable Energy ; Vol. 5, issue. 1 , 2014 , p. 55-63 ; Abbaspour, A ; Fotuhi-Firuzabad, M ; Moeini-Aghtaie, M ; Sharif University of Technology
2014
Abstract
With the current focus on energy and environment, efficient integration of renewable energies, especially wind energy into power systems, is becoming essential. Furthermore, to fully capture wind potentials and to recognize the unique characteristics associated with wind energy in power systems adequacy analysis, a profound inquiry is required. In this way, this paper tries to establish a comprehensive analytical approach for reliability modeling of doubly-fed induction generator (DFIG)-based wind farms. First, the most impressive components of wind turbines are introduced. It then continues with integrating developed state space model of wind turbines and their production uncertainties,...