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ghasemi--nazer-hossein
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Link Prediction in Social Networks Using the Diffusion Network Characteristics
, M.Sc. Thesis Sharif University of Technology ; Rabiee, Hamid Reza (Supervisor)
Abstract
Given a snapshot of a network, link preditction methods try to infer future intractions be-tween its nodes. These methods may be used in either analyzing current state of the network or predicting future links of it. Link prediction techniques have many applications among which we can mention recommendation systems. These systems are implemented for com-mercial reasons or preventing user confusion in huge amount of information available.A new perspective toward link prediction is based on supervised random walk. In such methods, a random walker starts from a node in the network and randomly traverses to one of the current node’s neighbours with a probability proportional to the chosen link’s...
Synthesis of Luminescent Carbon Dots for Selectivity Study Towards Metal Ions
, M.Sc. Thesis Sharif University of Technology ; Hormozi-Nezhad, Mohammad Reza (Supervisor)
Abstract
Today, the use of graphene quantum dots has been very much considered due to easy synthesis methods, strong fluorescence emission, and many sources of synthesis. In this study, the effect of changing capping agent of graphene quantum dots toward iron (Ⅲ), copper (Ⅱ) and mercury (Ⅱ) ions was studied. The linear range of response of the graphene quantum dots synthesized with ethylenediamine for mercury (Ⅱ) and iron (Ⅲ) ions was 10-70 µM, and this sensor also responded to Cu (Ⅱ) ions. Urea synthesized graphene quantum dots also responded to all three ions. The linear range of the response for mercury (Ⅱ) , iron (Ⅲ) and copper (Ⅱ) ions was 5-25, 10-70 and 120-120 μM respectively. The linear...
Creating a Protective Coating Against Corrosion and Erosion on the Surface of the Parts using in Sour Environments
, M.Sc. Thesis Sharif University of Technology ; Kokabi, Amir Hossein (Supervisor)
Abstract
A concern in the production sour oil and gas is the corrosion caused by the acid gas H2S. Even though corrosion resistant alloys (CRA) have long been available as a material selection option that mitigates H2S corrosion, the carbon steel is in general more cost-effective for oil and gas facilities. The aim of this study is to investigate the mechanical properties of 410NiMo cladding on a low alloy steel substrate. In this investigation, two successive layers of ER410NiMo were clad on low alloy steel substrates. To reduce the likelihood of Hydrogen Induced Cracking (HIC) and producing stable hydrogen traps, Post Weld Heat Treatment (PWHT) was used. To characterize the mechanical properties of...
Identifying Gene Expression Patterns in Memory T Cell Development
, M.Sc. Thesis Sharif University of Technology ; Mohammadzadeh, Hoda (Supervisor) ; Hossein Khalaj, Babak (Supervisor) ; Basiri, Mohsen (Co-Supervisor)
Abstract
T lymphocytes or T cells are a type of white blood cell that play an important role in the immune system. Memory T cells are a subset of them that are able to reactivate when being re-exposed to the pathogen. Because of the properties of these cells, they are an attractive choice for immunotherapy. Initial memory subgroups were shown to be more persistently effective in immunotherapies. However little is known about development and differentiation of these subgroups. With the discovery of a new subset of T cells, called T memory stem cells (TSCM), They are considered to develop through four stages, naive T cells (TN), T memory stem cells (TSCM), central memory T cells (TCM) and effector...
Modeling and Sliding Mode Control of a Roll-Pitch Seeker
, M.Sc. Thesis Sharif University of Technology ; Nobahari, Hadi (Supervisor) ; Pourtakdoust, Hossein (Supervisor) ; Mohammad Karimi, Hamed (Co-Supervisor)
Abstract
The purpose of this thesis is sliding mode control of a roll-pitch seeker by considering the zenith pass problem. This problem takes place when the target appears in front of the seeker’s head. First, the mathematical model of the roll and pitch frames is obtained by the Newton-Euler equations of motion. Then, a MIMO sliding mode controller is designed. The performance of the controller is investigated in the presence of model uncertainties and seeker disturbances. The results indicate that the designed controller is robust enough and provides a suitable performance in the stabilization, tracking and guidance loops.
Investigating the Seismic Behavior of Mid-rise Diagrid Buildings with Irregular Plan
, M.Sc. Thesis Sharif University of Technology ; Rahimzadeh Rofooei, Fayyaz (Supervisor)
Abstract
The utilized structural systems in high-rise buildings are under develop in terms of quantity and quality to increase their resistance under gravity and lateral loads. In addition, widespread researches are conducted to introduce and employ modern structural systems for high-rise buildings to improve there behavior in response to the applied forces, and to reduced the levels of hazards imposed by lateral forces. In this regard in recent years, use of diagrid structural systems has gained most of engineers and architects attention. Architectural limitations and improper site conditions may commonly result in construction of buildings with torsional irregularities. However, presence of...
Parallelized numerical modeling of the interaction of a solid object with immiscible incompressible two-phase fluid flow
, Article Engineering Computations (Swansea, Wales) ; Volume 34, Issue 3 , 2017 , Pages 709-724 ; 02644401 (ISSN) ; Nikbakhti, R ; Ghasemi, A ; Hedayati, F ; Malvandi, A ; Sharif University of Technology
2017
Abstract
Purpose - A numerical method is developed to capture the interaction of solid object with two-phase flow with high density ratios. The current computational tool would be the first step of accurate modeling of wave energy converters in which the immense energy of the ocean can be extracted at low cost. Design/methodology/approach - The full two-dimensional Navier-Stokes equations are discretized on a regular structured grid, and the two-step projection method along with multi-processing (OpenMP) is used to efficiently solve the flow equations. The level set and the immersed boundary methods are used to capture the free surface of a fluid and a solid object, respectively. The full...
A comparative overview of epigenomic profiling methods
, Article Frontiers in Cell and Developmental Biology ; Volume 9 , 2021 ; 2296634X (ISSN) ; Sepehri, M. H ; Nazer, N ; Norouzi, M. R ; Sharif University of Technology
Frontiers Media S. A
2021
Abstract
In the past decade, assays that profile different aspects of the epigenome have grown exponentially in number and variation. However, standard guidelines for researchers to choose between available tools depending on their needs are lacking. Here, we introduce a comprehensive collection of the most commonly used bulk and single-cell epigenomic assays and compare and contrast their strengths and weaknesses. We summarize some of the most important technical and experimental parameters that should be considered for making an appropriate decision when designing epigenomic experiments. © Copyright © 2021 Mehrmohamadi, Sepehri, Nazer and Norouzi
Oscillating pipe flow: High-resolution simulation of nonlinear mechanisms
, Article 2006 ASME Joint U.S.- European Fluids Engineering Division Summer Meeting, FEDSM2006, Miami, FL, 17 July 2006 through 20 July 2006 ; Volume 1 SYMPOSIA , 2006 , Pages 1-10 ; 0791847500 (ISBN); 9780791847503 (ISBN) ; Sharif University of Technology
American Society of Mechanical Engineers
2006
Abstract
A new perspective suitable for understanding the details of nonlinear pumping (formation of traveling shocks) inside a pressurized cavity is constructed in this paper. Full compressible axisymmetric three-dimensional Navier-Stokes equations are used as the starting point to cover all complexities of the problem that exceedingly increase for particular ranges of Mach, Reynolds and Prandtl numbers. Then a very high-order numerical method is introduced to preserve the user-defined order of accuracy for practical simulations. For removal of spurious waves, higher-order compact filters are derived. All equations are marched in time using the classical Runge-Kutta algorithm which is appropriate...
An optimized large-stencil approach for capturing near-PI frequencies
, Article 12th AIAA/CEAS Aeroacoustics Conference, Cambridge, MA, 8 May 2006 through 10 May 2006 ; Volume 5 , 2006 , Pages 3010-3022 ; 1563478099 (ISBN); 9781563478093 (ISBN) ; Sharif University of Technology
American Institute of Aeronautics and Astronautics Inc
2006
Abstract
Large-stencil schemes which their spectral properties are acceptable in the vicinity of ω = π are analyzed for the first time. A machine independent model for evaluating the efficiency of generalized time-marching finite-difference algorithms over periodic domains is developed. This model which is based on operation count reveals that for small values of Total Computational Cost(TCC), the previous low-order small-stencil schemes are more efficient while for moderate TCC, the efficiency of optimized large-stencil schemes abruptly increases. This important result is the motivation for developing optimized large-stencil schemes. The current schemes are successfully implemented in a full...
Numerical solution of high-frequency oscillations of a gas column using a modified lax-wendroff scheme
, Article International Conference on Noise and Vibration Engineering 2006, ISMA 2006, Heverlee, 18 September 2006 through 20 September 2006 ; Volume 4 , 2006 , Pages 2191-2199 ; Sharif University of Technology
Katholieke Universiteit Leuven
2006
Abstract
Recently, several high-order accurate methods have been developed for solving nonlinear equations governing in the high-frequency oscillations of a fluid column. If we assume that the value of Reynolds and Prandtl numbers are high enough then it is possible to neglect the effect of Stokes Layer and it has been previously shown that the calculated pressure profile obtained by solving three-dimensional axisymmetric compressible NS (Navier-Stokes) equations is in good agreement with one-dimensional adiabatic model of Ilinskii. For this particular flow which is the typical of engineering flows inside acoustical compressors, it is clear that high-resolution simulation of NS equations in higher...
Oscillating pipe flow: high-resolution simulation of nonlinear mechanisms
, Article 2006 2nd ASME Joint U.S.-European Fluids Engineering Summer Meeting, FEDSM 2006, Miami, FL, 17 July 2006 through 20 July 2006 ; Volume 2006 , 2006 ; 0791837831 (ISBN); 9780791837832 (ISBN) ; Sharif University of Technology
2006
Abstract
A new perspective suitable for understanding the details of nonlinear pumping (formation of traveling shocks) inside a pressurized cavity is constructed in this paper. Full compressible axisymmetric three-dimensional Navier-Stokes equations are used as the starting point to cover all complexities of the problem that exceedingly increase for particular ranges of Mach, Reynolds and Prandtl numbers. Then a very high-order numerical method is introduced to preserve the user-defined order of accuracy for practical simulations. For removal of spurious waves, higher-order compact filters are derived. All equations are marched in time using the classical Runge-Kutta algorithm which is appropriate...
Expression of PIAS genes in migraine patients
, Article Journal of Molecular Neuroscience ; Volume 71, Issue 10 , 2021 , Pages 2053-2059 ; 08958696 (ISSN) ; Hesami, O ; Nazer, N ; Sayad, A ; Taheri, M ; Sharif University of Technology
Humana Press Inc
2021
Abstract
Migraine is a complex disabling condition which is associated with dysregulation of several pathways particularly those being associated with immune responses. In order to assess contribution of protein inhibitor of activated STAT (PIAS) in the pathogenesis of migraine, we quantified expression levels of PIAS1–PIAS4 genes in the circulation of patients with migraine compared with controls. Expression of PIAS1 was substantially lower in total migraineurs compared with controls (ratio of mean expressions (RME) = 0.18, SE = 0.29, P value < 0.001) and in both male and female migraineurs compared with sex-matched controls. Expression of PIAS2 was lower in migraineurs without aura compared with...
Facile synthesis and simulation of MnO2 nanoflakes on vertically aligned carbon nanotubes, as a high-performance electrode for Li-ion battery and supercapacitor
, Article Electrochimica Acta ; Volume 390 , 2021 ; 00134686 (ISSN) ; Abnavi, A ; Ghasemi, F ; Ghasemi, S ; Sanaee, Z ; Mohajerzadeh, S ; Sharif University of Technology
Elsevier Ltd
2021
Abstract
This study reports the successful fabrication of high-performance flexible binder-free lithium-ion battery anode and supercapacitor based on the synthesis of 3D hierarchical MnO2 nanoflakes (NFs) on vertically aligned carbon nanotubes (VACNTs) grown upon stainless steel (SS). The experimental results revealed that the prepared electrodes were well served as supercapacitors with a tremendous specific capacitance of MnO2 NFs VACNT/SS 1131 F/g at 0.25 A/g in 0.5 mol.L−1 Na2SO4, 518.8% more than VACNT/SS (218 F/g). Compared to other MnO2 NFs/CNT composites, as-fabricated binder-free MnO2 NFs/VACNTs electrode achieves outstanding performance with high initial discharge and charge capacities of...
Facile synthesis and simulation of MnO2 nanoflakes on vertically aligned carbon nanotubes, as a high-performance electrode for Li-ion battery and supercapacitor
, Article Electrochimica Acta ; Volume 390 , 2021 ; 00134686 (ISSN) ; Abnavi, A ; Ghasemi, F ; Ghasemi, S ; Sanaee, Z ; Mohajerzadeh, S ; Sharif University of Technology
Elsevier Ltd
2021
Abstract
This study reports the successful fabrication of high-performance flexible binder-free lithium-ion battery anode and supercapacitor based on the synthesis of 3D hierarchical MnO2 nanoflakes (NFs) on vertically aligned carbon nanotubes (VACNTs) grown upon stainless steel (SS). The experimental results revealed that the prepared electrodes were well served as supercapacitors with a tremendous specific capacitance of MnO2 NFs VACNT/SS 1131 F/g at 0.25 A/g in 0.5 mol.L−1 Na2SO4, 518.8% more than VACNT/SS (218 F/g). Compared to other MnO2 NFs/CNT composites, as-fabricated binder-free MnO2 NFs/VACNTs electrode achieves outstanding performance with high initial discharge and charge capacities of...
Equipment failure rate in electric power distribution networks: An overview of concepts, estimation, and modeling methods
, Article Engineering Failure Analysis ; Volume 145 , 2023 ; 13506307 (ISSN) ; Shahrabi Farahani, E ; Fotuhi Firuzabad, M ; Dehghanian, P ; Ghasemi, A ; Wang, F ; Sharif University of Technology
Elsevier Ltd
2023
Abstract
The evolution of the organizational attitudes regarding strategic management of system physical assets and the emergence of new technologies call for special attention to maintenance and reliability. State-of-the-art literature suggested a number of techniques and strategies for estimating the equipment failure rates; however, paralyzed by lack of real-world data, existing literature mostly relied on simplifications that may bring about unique challenges and result in low-accuracy estimations. This paper reviews the existing literature in estimating and modeling the failure rate of power system equipment. The review includes the existing models and the ongoing research on degradation,...
Expression analysis of BDNF, BACE1 and their antisense transcripts in inflammatory demyelinating polyradiculoneuropathy
, Article Multiple Sclerosis and Related Disorders ; Volume 47 , 2021 ; 22110348 (ISSN) ; Mazdeh, M ; Nicknafs, F ; Nazer, N ; Sayad, A ; Taheri, M ; Sharif University of Technology
Elsevier B.V
2021
Abstract
Acute and chronic inflammatory demyelinating polyradiculoneuropathies (AIDP and CIDP) are two immune-related conditions in the peripheral nervous system. In the current study, we assessed expression levels of Beta-secretase (BACE1), brain-derived neurotrophic factor (BDNF) and their antisense transcripts in the peripheral blood of AIDP and CIDP patients compared with age- and sex-matched controls to assess their potential as biomarkers for these conditions. Expressions of BACE1 and BACE1-AS were down-regulated in CIDP cases compared with controls (Ratios of mean expressions=0.01 and 0.03; P values= 1.07E-08, respectively). On the other hand, expressions of BDNF and BDNF-AS were up-regulated...
Optimum waist of localized basis functions in truncated series employed in some optical applications
, Article Applied Optics ; Volume 49, Issue 8 , 2010 , Pages 1210-1218 ; 1559128X (ISSN) ; Mehrany, K ; Sharif University of Technology
2010
Abstract
The waist parameter is a particularly important factor for functional expansion in terms of localized orthogonal basis functions. We present a systematic approach to evaluate an asymptotic trend for the optimum waist parameter in truncated orthogonal localized bases satisfying several general conditions. This asymptotic behavior is fully introduced and verified for Hermite - Gauss and Laguerre-Gauss bases. As a special case of importance, a good estimate for the optimum waist in projection of discontinuous profiles on localized basis functions is proposed. The importance and application of the proposed estimation is demonstrated via several optical applications
Microstructural evolution mechanism during brazing of Hastelloy X superalloy using Ni–Si–B filler metal
, Article Science and Technology of Welding and Joining ; 2017 , Pages 1-7 ; 13621718 (ISSN) ; Pouranvari, M ; Sharif University of Technology
2017
Abstract
The paper aims at understanding solidification phenomena and solid state precipitations during diffusion brazing of Hastelloy X nickel base superalloy using a ternary Ni–4.5Si–3.2 B (in wt-%) filler metal. The joint is featured by the formation of Ni-rich solid solution in an isothermal solidification zone, borides/silicide formation during eutectic-type solidification in an athermal solidification zone, on-cooling precipitation of fine nickel silicides in the joint centerline, in situ precipitation of Mo–Cr-rich borides in the diffusion affected zone and grain growth in the heat affected zone. The implication of the phase transformations on the joint properties is discussed. It is shown...
A quantum mechanical approach towards the calculation of transition probabilities between DNA codons
, Article BioSystems ; Volume 184 , 2019 ; 03032647 (ISSN) ; Shafiee, A ; Sharif University of Technology
Elsevier Ireland Ltd
2019
Abstract
The role of quantum tunneling in altering the structure of nucleotides to each other and causing a mutational event in DNA has been a topic of debate for years. Here, we introduce a new quantum mechanical approach for analyzing a typical point-mutation in DNA strands. Assuming each codon as a base state, a superposition of codon states could provide a physical description for a set of codons encoding the same amino acid and there are transition amplitudes between them. We choose the amino acids Phe and Ile as our understudy bio-systems which are encoded by two and three codons, respectively. We treat them as large quantum systems and use double- and triple-well potential models to study the...