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hashemi-najafabadi--h
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Mathematical performance modelling of adaptive wormhole routing in optoelectronic hypercubes
, Article Journal of Parallel and Distributed Computing ; Volume 67, Issue 9 , Volume 67, Issue 9 , 2007 , Pages 967-980 ; 07437315 (ISSN) ; Sarbazi Azad, H ; Sharif University of Technology
2007
Abstract
In this paper, an analytical performance model for adaptive wormhole routing in the hypercube-based optical transpose interconnection system (OTIS-hypercube) is proposed and validated. Using this model, the performance merits of the OTIS-hypercube are discussed. We also compare the performance of the OTIS-hypercube with that of equivalent hypercube network under different implementation constraints. Compared to pure simulation results, the presented model can serve as a more appropriate and compact method to display the performance characteristics of OTIS-hypercube networks. © 2007 Elsevier Inc. All rights reserved
An accurate performance model of fully adaptive routing in wormhole-switched two-dimensional mesh multicomputers
, Article Microprocessors and Microsystems ; Volume 31, Issue 7 , 2007 , Pages 445-455 ; 01419331 (ISSN) ; Sarbazi Azad, H ; Rajabzadeh, P ; Sharif University of Technology
2007
Abstract
Numerous analytical performance models have been proposed for deterministic wormhole-routed mesh networks while only a single model, to our best knowledge, has been suggested for fully adaptive wormhole routing in mesh interconnection networks. This paper proposes a new and accurate analytical performance model for fully adaptive wormhole-routed mesh networks. Simulation results show that unlike the previously proposed model which is only accurate in light traffic loads, this model can be used for the performance analysis of almost all traffic loads. © 2007 Elsevier B.V. All rights reserved
Performance modeling of n-dimensional mesh networks
, Article Performance Evaluation ; Vol. 67, issue. 12 , 2010 , p. 1304-1323 ; ISSN: 01665316 ; Sarbazi-Azad, H ; Zarandi, H.-R ; Khodaie, E ; Hashemi-Najafabadi, H ; Ould-Khaoua, M ; Sharif University of Technology
2010
Abstract
Mesh-based interconnection networks are the most popular inter-processor communication infrastructures used in current parallel supercomputers. Although many analytical models of n-D torus interconnection networks have been reported in the literature over the last decade, few analytical models have been proposed for the 2-D mesh case (and not for the general n-D mesh network) using inaccurate approximations as they have not fully incorporated the asymmetry effects of the mesh topology, in order to reduce the model complexity. There has not been reported, to the best of our knowledge, a performance model that can deal with the n-D mesh network. To fill this gap, in this paper, we propose the...
Performance modeling of n-dimensional mesh networks
, Article Performance Evaluation ; Volume 67, Issue 12 , December , 2010 , Pages 1304-1323 ; 01665316 (ISSN) ; Sarbazi Azad, H ; Zarandi, H. R ; Khodaie, E ; Hashemi Najafabadi, H ; Ould Khaoua, M ; Sharif University of Technology
2010
Abstract
Mesh-based interconnection networks are the most popular inter-processor communication infrastructures used in current parallel supercomputers. Although many analytical models of n-D torus interconnection networks have been reported in the literature over the last decade, few analytical models have been proposed for the 2-D mesh case (and not for the general n-D mesh network) using inaccurate approximations as they have not fully incorporated the asymmetry effects of the mesh topology, in order to reduce the model complexity. There has not been reported, to the best of our knowledge, a performance model that can deal with the n-D mesh network. To fill this gap, in this paper, we propose the...
Wireless electrochemical preparation of gradient nanoclusters consisting of copper(II), stearic acid and montmorillonite on a copper wire for headspace in-tube microextraction of chlorobenzenes
, Article Microchimica Acta ; Volume 185, Issue 1 , 2018 ; 00263672 (ISSN) ; Bagheri, H ; Sharif University of Technology
Springer-Verlag Wien
2018
Abstract
This work introduces a new gradient fiber coating for microextraction of chlorobenzenes. Nanoclusters of organoclay-Cu(II) on a copper wire were fabricated by wireless electrofunctionalization. The resultant gradient coatings are more robust, and thermally and mechanically stable. Wireless electrofunctionalization was carried out in a bipolar cell under a constant deposition potential and using an ethanolic electrolyte solution containing stearic acid and montmorillonite. Stearic acid acts as an inexpensive and green coating while montmorillonite acts as a modifier to impart thermal stability. The gradient morphology of the nanoclusters was investigated by scanning electron microscopy,...
Self-modeling curve resolution techniques applied to comparative analysis of volatile components of Iranian saffron from different regions
, Article Analytica Chimica Acta ; Volume 662, Issue 2 , 2010 , Pages 143-154 ; 00032670 (ISSN) ; Parastar, H ; Ebrahimi Najafabadi, H ; Sharif University of Technology
2010
Abstract
Volatile components of saffron from different regions of Iran were extracted by ultrasonic-assisted solvent extraction (USE) and were analyzed by gas chromatography-mass spectrometry (GC-MS). Self-modeling curve resolution (SMCR) was proposed for resolving the co-eluted GC-MS peak clusters into pure chromatograms and mass spectra. Multivariate curve resolution-objective function minimization (MCR-FMIN) and multivariate curve resolution-alternating least square (MCR-ALS) were successfully used for this purpose. The accuracy of the qualitative and quantitative results was improved considerably using SMCR techniques. Comparison of the results of saffron from different regions of Iran showed...
Characterization of volatile components of Iranian saffron using factorial-based response surface modeling of ultrasonic extraction combined with gas chromatography-mass spectrometry analysis
, Article Journal of Chromatography A ; Volume 1216, Issue 33 , 2009 , Pages 6088-6097 ; 00219673 (ISSN) ; Parastar, H ; Ebrahimi Najafabadi, H ; Sharif University of Technology
2009
Abstract
The volatile components of Iranian saffron were extracted using ultrasonic solvent extraction (USE) technique and then were separated and detected by gas chromatography-mass spectrometry (GC-MS). Variables affecting the extraction procedure were screened by using a 25-1 fractional factorial design and among them; sample amount, solvent volume, solvent ratio and extraction time were optimized by applying a rotatable central composite design (CCD). The optimum values of factors were: 2.38 g sample, 29.04 mL solvent, 69.23% MeOH solvent ratio and 71.8 min for the extraction time. Forty constituents were identified for Iranian saffron by GC-MS representing 90% of the total peak area. The major...
Modeling of retention behaviors of most frequent components of essential oils in polar and non-polar stationary phases
, Article Journal of Separation Science ; Volume 34, Issue 13 , 2011 , Pages 1538-1546 ; 16159306 (ISSN) ; Ebrahimi Najafabadi, H ; Sharif University of Technology
2011
Abstract
The gas chromatography retention indices of 100 different components of essential oils, on three columns with stationary phases of different polarities, were used to develop robust quantitative structure-retention relationship (QSRR) models. Two linear models with only one variable, i.e. solvation entropy, were developed, which explain 95 and 94% of variances of the test set for dimethyl silicone and dimethyl silicone with 5% phenyl group columns, respectively. These models are extremely simple and easy to interpret, but they show higher errors compared with more robust models such as partial least square (PLS) and ridge regressions. For the third column (polyethylene glycol (PEG)), 24...
The use of ladder particle swarm optimisation for quantitative structure-activity relationship analysis of human immunodeficiency virus-1 integrase inhibitors
, Article Molecular Simulation ; Volume 37, Issue 15 , 2011 , Pages 1221-1233 ; 08927022 (ISSN) ; Ebrahimi-Najafabadi, H ; Sharif University of Technology
2011
Abstract
This contribution focuses on the use of ladder particle swarm optimisation (LPSO) on modelling of oxadiazole- and triazolesubstituted naphthyridines as human immunodeficiency virus-1 integrase inhibitors. Artificial neural network (ANN) and Monte Carlo cross-validation techniques were combined with LPSO to develop a quantitative structure-activity relationship model. The techniques of LPSO, ANN and sample set partitioning based on joint x-y distances were applied as feature selection, mapping and model evaluation, respectively. The variables selected by LPSO were used as inputs of Bayesian regularisation ANN. The statistical parameters of correlation of deterministic, R2, and...
Gradient extractive phase prepared by controlled rate infusion method: An applicable approach in solid phase microextraction for non–targeted analysis
, Article Journal of Chromatography A ; Volume 1574 , 2018 , Pages 130-135 ; 00219673 (ISSN) ; Kazemi, E ; Bagheri, H ; Sharif University of Technology
Elsevier B.V
2018
Abstract
The aim of this study is to introduce an extractive phase based on gradient concept by continuous changing in chemical functional groups for non–targeted analysis. For this purpose, three different two–component coatings containing (3–aminopropyl)trimethoxysilane (APTES) as polar and either phenyltriethoxysilane (PTES), octyl–trimethoxysilane (OTMS) or methyltrimethoxysilane (MTMS) as nonpolar precursors were formed on the modified stainless steel wires using controlled rate infusion (CRI) method. The presence of polar and/or non–polar functional groups on the surface of substrate was evaluated by Fourier–transform infrared spectroscopy (FTIR) together with contact angles determined...
Amine/phenyl gradient derived base layer as a comprehensive extractive phase for headspace cooled in–tube microextraction of volatile organic compounds in saliva
, Article Journal of Pharmaceutical and Biomedical Analysis ; Volume 191 , 2020 ; Bagheri, H ; Rostami, A ; Sharif University of Technology
Elsevier B.V
2020
Abstract
A gradient derived base layer extractive phase was synthesized and applied for the determination of volatile organic compounds (VOCs) in saliva samples using the headspace cooled in–tube microextraction (HS–CITME) method. The base layers from three different sols of phenyltriethoxysilane (PTES), octyltrimethoxysilane (OTMS) and methyltrimethoxysilane (MTMS) as nonpolar precursors were individually dip coated on the stainless steel wires (SSW). Then, the hydrolyzed polar precursor aminopropyltriethoxysilane (APTES) reacted with the silanol groups already formed on the surface of SSWs via controlled rate infusion (CRI) method. The presence of polar and non–polar functional groups on the...
The impact of including tRNA content on the optimality of the genetic code
, Article Bulletin of Mathematical Biology ; Volume 67, Issue 6 , 2005 , Pages 1355-1368 ; 00928240 (ISSN) ; Shateri Najafabadi, H ; Ahmadi Nejad, H ; Torabi, N ; Sharif University of Technology
2005
Abstract
Statistical and biochemical studies have revealed nonrandom patterns in codon assignments. The canonical genetic code is known to be highly efficient in minimizing the effects of mistranslational errors and point mutations, since it is known that, when an amino acid is converted to another due to error, the biochemical properties of the resulted amino acid are usually very similar to those of the original one. In this study, we have taken into consideration both relative frequencies of amino acids and relative gene copy frequencies of tRNAs in genomic sequences in order to introduce a fitness function which models the mistranslational probabilities more accurately in modern organisms. The...
Size-dependent generalized thermoelasticity model for Timoshenko microbeams
, Article Acta Mechanica ; Vol. 225, issue. 7 , 2014 , p. 1823-1842 ; Molaei Najafabadi, M ; Basirat Tabrizi, H ; Sharif University of Technology
2014
Abstract
A size-dependent, explicit formulation for coupled thermoelasticity addressing a Timoshenko microbeam is derived in this study. This novel model combines modified couple stresses and non-Fourier heat conduction to capture size effects in the microscale. To this purpose, a length-scale parameter as square root of the ratio of curvature modulus to shear modulus and a thermal relaxation time as the phase lag of heat flux vector are considered for predicting the thermomechanical behavior in a microscale device accurately. Governing equations and boundary conditions of motion are obtained simultaneously through variational formulation based on Hamilton's principle. As for case study, the model is...
Optimization of functionally graded materials in the slab symmetrically surface heated using transient analytical solution
, Article Journal of Thermal Stresses ; Vol. 37, issue. 2 , February , 2014 , pp. 137-159 ; ISSN: 01495739 ; Taati, E ; Tabrizi, H. B ; Sharif University of Technology
2014
Abstract
Functionally graded materials (FGMs) have been introduced to significantly reduce the temperature and thermal stresses on structures at severe thermal loading. Design and development of FGMs as the heat treatable and energy-absorbing materials for high-temperature and thermal protection systems requires understanding of exact temperature and thermal stress distribution, in order to optimize their resistance to failure. In this study, transient temperature and associated thermal stresses in a functionally graded slab symmetrically heated on both sides are determined by separation of the variables scheme. This method is applied to the heat conduction equation in terms of heat flux for...
Multivariate curve resolution-particle swarm optimization: A high-throughput approach to exploit pure information from multi-component hyphenated chromatographic signals
, Article Analytica Chimica Acta ; Volume 772 , 2013 , Pages 16-25 ; 00032670 (ISSN) ; Ebrahimi Najafabadi, H ; Jalali Heravi, M ; Sharif University of Technology
2013
Abstract
Multivariate curve resolution-particle swarm optimization (MCR-PSO) algorithm is proposed to exploit pure chromatographic and spectroscopic information from multi-component hyphenated chromatographic signals. This new MCR method is based on rotation of mathematically unique PCA solutions into the chemically meaningful MCR solutions. To obtain a proper rotation matrix, an objective function based on non-fulfillment of constraints is defined and is optimized using particle swarm optimization (PSO) algorithm. Initial values of rotation matrix are calculated using local rank analysis and heuristic evolving latent projection (HELP) method. The ability of MCR-PSO in resolving the chromatographic...
Use of kernel orthogonal projection to latent structure in modeling of retention indices of pesticides
, Article QSAR and Combinatorial Science ; Volume 28, Issue 11-12 , 2009 , Pages 1432-1441 ; 1611020X (ISSN) ; Ebrahimi Najafabadi, H ; Khodabandehloo, A ; Sharif University of Technology
2009
Abstract
The gas chromatography retention indices of 168 pesticides were used to construct a robust quantitative structure - retention relationship (QSRR) model. After outlier detection by Cook's influence measurement, the remaining compounds were subjected to two different modeling strategies. The first one was stepwise multiple linear regression (stepwise-MLR). Results of this method revealed that 81.7 percent of variances of the response could be explained by the model. The other strategy was kernel orthogonal projection to latent structure (KOPLS). R2 and RMSE values for the prediction set established by Monte Carlo cross validation of the KOPLS were 0.906 and 0.093, respectively. Y-randomization...
Microstructure and tensile properties of squeeze cast Al-Zn-Mg-Cu alloy
, Article Materials Science and Technology ; Volume 17, Issue 6 , 2001 , Pages 639-644 ; 02670836 (ISSN) ; Ashoori, H ; Davami, P ; Sharif University of Technology
IOM Communications Ltd
2001
Abstract
It is well known that wrought aluminium alloys have tensile properties superior to those of the cast products. Wrought grade alloys cannot usually be produced by conventional casting processes to attain the same level of tensile properties. However, progress in casting methods in recent years has made it possible to produce wrought alloys by means of squeeze casting techniques. In the present study an Al-Zn-Mg-Cu alloy as been produced by squeeze casting. Tensile properties close to those of wrought products have been achieved by controlling the microstructure, pressure, and other processing parameters. © 2001 IoM Communications Ltd
Controlling aspect ratio of colloidal silver nanorods using response surface methodology
, Article Colloids and Surfaces A: Physicochemical and Engineering Aspects ; Volume 393 , 2012 , Pages 46-52 ; 09277757 (ISSN) ; Jalali Heravi, M ; Robatjazi, H ; Ebrahimi Najafabadi, H ; Sharif University of Technology
2012
Abstract
The properties of metallic nanorods vary due to changes in their composition, size and shape, which all depend on the aspect ratio of the nanorods. This work focuses on the optimization of the aspect ratio of silver nanorods using response surface methodology (RSM). Seed-mediated approach, which is the newest method with less difficulty, has been used for the synthesis of silver nanorods. First, silver ions were reduced with sodium borohydride in the presence of sodium citrate dehydrate, as stabilizer. Then, the prepared seeds were added to a solution containing more metal salts, a weak reducing agent (ascorbic acid) and a rod-like micellar template (cetyltrimethylammonium bromide, CTAB)....
On the optimality of the genetic code, with the consideration of coevolution theory by comparison of prominent cost measure matrices
, Article Journal of Theoretical Biology ; Volume 235, Issue 3 , 2005 , Pages 318-325 ; 00225193 (ISSN) ; Shateri Najafabadi, H ; Hassani, K ; Ahmadi Nejad, H ; Torabi, N ; Sharif University of Technology
2005
Abstract
Statistical and biochemical studies have revealed non-random patterns in codon assignments. The canonical genetic code is known to be highly efficient in minimizing the effects of mistranslation errors and point mutations, since it is known that when an amino acid is converted to another due to error, the biochemical properties of the resulted amino acid are usually very similar to those of the original one. In this study, using altered forms of the fitness functions used in the prior studies, we have optimized the parameters involved in the calculation of the error minimizing property of the genetic code so that the genetic code outscores the random codes as much as possible. This work also...
Novel approach for liquid-liquid phase equilibrium of biodiesel (canola and sunflower) + glycerol + methanol
, Article Industrial and Engineering Chemistry Research ; Vol. 53, issue. 2 , 2014 , pp. 855-864 ; ISSN: 08885885 ; Abedini Najafabadi, H ; Pazuki, G ; Vossoughi, M ; Sharif University of Technology
2014
Abstract
In this study, a novel experimental approach was used to overcome the lack of phase equilibrium information to obtain data that is more applicable to industrial situations. Liquid-liquid equilibrium (LLE) data, tie-lines, and phase boundaries were carried out for two systems of canola oil methyl esters (containing 1 wt % KOH) + glycerol + methanol and sunflower oil methyl esters (containing 1 wt % KOH) + glycerol + methanol at three different temperatures (303.15, 313.15, and 323.15 K). The quality of data was also ascertained using Othmer-Tobias correlations. The experimental LLE data was also correlated by the nonrandom two-liquid (NRTL) and the Wilson-NRF Gibbs free energy models. The...