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    Efficient simulation of resonance Raman spectra with tight-binding approximations to density functional theory

    , Article Journal of Chemical Physics ; Volume 157, Issue 8 , Volume 157, Issue 8 , 2022 ; 00219606 (ISSN) Ashtari Jafari, S ; Jamshidi, Z ; Visscher, L ; Sharif University of Technology
    American Institute of Physics Inc  2022
    Abstract
    Resonance Raman spectroscopy has long been established as one of the most sensitive techniques for detection, structure characterization, and probing the excited-state dynamics of biochemical systems. However, the analysis of resonance Raman spectra is much facilitated when measurements are accompanied by Density Functional Theory (DFT) calculations that are expensive for large biomolecules. In this work, resonance Raman spectra are therefore computed with the Density Functional Tight-Binding (DFTB) method in the time-dependent excited-state gradient approximation. To test the accuracy of the tight-binding approximations, this method is first applied to typical resonance Raman benchmark... 

    Erratum to: clinical application of a humanoid robot in pediatric cancer interventions (Int J of Soc robotics, 10.1007/s12369-015-0294-y)

    , Article International Journal of Social Robotics ; Volume 8, Issue 5 , 2016 , Pages 761- ; 18754791 (ISSN) Alemi, M ; Ghanbarzadeh, A ; Meghdari, A ; Jafari Moghadam, L ; Sharif University of Technology
    Springer Netherlands  2016
    Abstract
    A substantial part of this paperwas published in volume 8755 of the series LectureNotes in Computer Science, page 11–22, Title of the book: Social Robotics, 6th International Conference, ICSR 2014, Sydney, NSW, Australia, October 27–29, 2014, ISBN: 978-3-319-11972-4, article title: Impact of a Social Humanoid Robot as a Therapy Assistant in Children Cancer Treatment, by Minoo Alemi, Ali Meghdari, Ashkan Ghanbarzadeh, Leila Jafari Moghadam and Anooshe Ghanbarzadeh. The authors apologize for not having referenced to the previously published article  

    Effect of thickness and reinforcement configuration on flexural and impact behaviour of GFRP laminates after exposure to elevated temperatures

    , Article Composites Part B: Engineering ; Volume 157 , 2019 , Pages 76-99 ; 13598368 (ISSN) Bazli, M ; Ashrafi, H ; Jafari, A ; Zhao, X.-L ; Gholipour, H ; Oskouei, A. V ; Sharif University of Technology
    Elsevier Ltd  2019
    Abstract
    This study investigates the flexural and impact behaviour of GFRP laminates after exposure to elevated temperatures. The effect of fibre's length and orientation, laminate's thickness, and exposure time is studied. A total number of 540 tests in terms of three-point bending and Charpy impact tests were conducted to obtain the mechanical properties. In addition, SEM analyses were carried out to investigate the degradation mechanisms. Finally, statistical study was conducted to investigate the contribution of each variable and develop probabilistic models using ANOVA and linear Bayesian regression method. The results showed that generally the flexural and impact properties of GFRP laminates... 

    Effect of fibers configuration and thickness on tensile behavior of GFRP laminates subjected to elevated temperatures

    , Article Construction and Building Materials ; Volume 202 , 2019 , Pages 189-207 ; 09500618 (ISSN) Jafari, A ; Bazli, M ; Ashrafi, H ; Vatani Oskouei, A ; Azhari, S ; Zhao, X. L ; Gholipour, H ; Sharif University of Technology
    Elsevier Ltd  2019
    Abstract
    This study was aimed at gaining an improved understanding of the behavior of glass fiber-reinforced polymer laminates at elevated temperatures by means of testing laminate specimens with unidirectional, woven, and randomly distributed (chopped strand mat) fibers. The testing parameters were temperature, the type of fiber, and the thickness of the laminates. The failure modes of the specimens and their elasticity moduli at ambient temperature were investigated, and analysis of variance was conducted to determine the contribution of each parameter to the behavioral test results. The findings showed that among the parameters, an increase in temperature exerted the strongest effect on the... 

    Durability of glass-fibre-reinforced polymer composites under seawater and sea-sand concrete coupled with harsh outdoor environments

    , Article Advances in Structural Engineering ; Volume 24, Issue 6 , 2021 , Pages 1090-1109 ; 13694332 (ISSN) Bazli, M ; Zhao, X. L ; Jafari, A ; Ashrafi, H ; Raman, RK. S ; Bai, Y ; Khezrzadeh, H ; Sharif University of Technology
    SAGE Publications Inc  2021
    Abstract
    This article presents an investigation on the durability of different glass-fibre-reinforced polymer composites when subjected to harsh outdoor conditions, including freeze/thaw cycles, ultraviolet radiation and moisture, as well as when used with seawater sea-sand concrete for construction applications. To achieve this, the effects of a number of parameters, including the environment of exposure, exposure time, profile cross-sectional configuration and orientation of fibres, on the mechanical properties of different glass-fibre-reinforced polymer composites were studied. To investigate the degradation of the mechanical properties, three-point bending, compression and tension tests were... 

    Gapless chiral excitons in thin films of topological insulators

    , Article EPL ; Vol. 107, issue. 2 , 2014 ; ISSN: 02955075 Jafari, S. A ; Sharif University of Technology
    2014
    Abstract
    In a nanoscopic thin film of a strong topological insulator (TI) the Coulomb interaction in the channel that exchanges the two electrons with the same chirality in two different planes of the slab takes advantage of the minus sign resulting from such "exchange" and gives rise to a bound state between the positive-energy states in one surface and the negative-energy states in the opposite surface. Therefore particle and hole pairs in the undoped Dirac cone of the TI thin film form an inter-surface spin-singlet state that lies below the continuum of free particle-hole pairs. This mode is similar to the excitons of semiconductors, albeit formed between the electron and hole pairs from two... 

    Collective excitations and the nature of Mott transition in undoped gapped graphene

    , Article Journal of Physics Condensed Matter ; Volume 24, Issue 30 , 2012 ; 09538984 (ISSN) Jafari, S. A ; Sharif University of Technology
    2012
    Abstract
    The particle-hole continuum (PHC) for massive Dirac fermions provides an unprecedented opportunity for the formation of two collective split-off states, one in the singlet and the other in the triplet (spin-1) channel, when the short-range interactions are added to the undoped system. Both states are close in energy and are separated from the continuum of free particle-hole excitations by an energy scale of the order of the gap parameter Δ. They both disperse linearly with two different velocities, reminiscent of spin-charge separation in Luttinger liquids. When the strength of Hubbard interactions is stronger than a critical value, the velocity of singlet excitation, which we interpret as a... 

    Nonlinear optical response in gapped graphene

    , Article Journal of Physics Condensed Matter ; Volume 24, Issue 20 , 2012 ; 09538984 (ISSN) Jafari, S. A ; Sharif University of Technology
    2012
    Abstract
    We present a formulation for the nonlinear optical response in gapped graphene, where the low-energy single-particle spectrum is modeled by massive Dirac theory. As a representative example of the formulation presented here, we obtain a closed form formula for the third harmonic generation in gapped graphene. It turns out that the covariant form of the low-energy theory gives rise to peculiar logarithmic singularities in the nonlinear optical spectra. The universal functional dependence of the response function on dimensionless quantities indicates that the optical nonlinearity can be largely enhanced by tuning the gap to smaller values  

    Exact phase boundaries and topological phase transitions of the XYZ spin chain

    , Article Physical Review E ; Volume 96, Issue 1 , 2017 ; 24700045 (ISSN) Jafari, S. A ; Sharif University of Technology
    2017
    Abstract
    Within the block spin renormalization group, we give a very simple derivation of the exact phase boundaries of the XYZ spin chain. First, we identify the Ising order along ◯ or ŷ as attractive renormalization group fixed points of the Kitaev chain. Then, in a global phase space composed of the anisotropy λ of the XY interaction and the coupling Δ of the Δσzσz interaction, we find that the above fixed points remain attractive in the two-dimesional parameter space. We therefore classify the gapped phases of the XYZ spin chain as: (1) either attracted to the Ising limit of the Kitaev-chain, which in turn is characterized by winding number ±1, depending on whether the Ising order parameter is... 

    Electric field assisted amplification of magnetic fields in tilted Dirac cone systems

    , Article Physical Review B ; Volume 100, Issue 4 , 2019 ; 24699950 (ISSN) Jafari, S. A ; Sharif University of Technology
    American Physical Society  2019
    Abstract
    We show that the continuum limit of the tilted Dirac cone in materials such as 8-Pmmn borophene and layered organic conductor α-(BEDT-TTF)2I3 corresponds to deformation of the Minkowski space-time of Dirac materials. From its Killing vectors we construct an emergent tilted-Lorentz (t-Lorentz) symmetry group for such systems. As an example of the t-Lorentz transformations we obtain the exact solution of the Landau bands for a crossed configuration of electric and magnetic fields. For any given tilt parameter 0≤ζ<1, if the ratio χ=vFBz/Ey of the crossed magnetic and electric fields satisfies χ≥1+ζ, one can always find appropriate t-boosts in both valleys labeled by τ=±1 in such a way that the... 

    Tilted-Lorentz symmetry

    , Article Iranian Journal of Physics Research ; Volume 19, Issue 4 , Winter , 2020 , Pages 831-834 Jafari, S. A ; Sharif University of Technology
    Isfahan University of Technology  2020
    Abstract
    Dirac cone can be tilted in condensed matter setting. As a result of tilt, the Lorentz symmetry is reduced to what we call tilted-Lorentz symmetry. In this paper, we derive the tilted-Lorentz transformations that leave a world with tilted Dirac cone invariant. © 2020, Isfahan University of Technology. All rights reserved  

    Mitigating DDoS Using BOTNET Analysis with Flow Anomaly Detection

    , M.Sc. Thesis Sharif University of Technology Baradaran Jafari, Navid (Author) ; Jafari, Mahdi (Supervisor) ; Endicott-Popovsky, Barbara (Co-Advisor)
    Abstract
    Internet is the largest multi-purpose, self-reliant, complex and distributed computer network across the globe. The nodes of this network are placed in every place like homes, offices, military camps, schools and all other locations by utilizing many different communication protocols, media and capacities. Furthermore, by rapid technology development, there are many newly born applications utilizing internet in new ways such as Internet of Things systems. The explosive growth of technology causing accelerated addition of new nodes to the internet, and any new single node may have several new unpatched vulnerabilities. This is a serious issue for managing this vast chaotic configuration and... 

    Durability of glass-fibre-reinforced polymer composites under seawater and sea-sand concrete coupled with harsh outdoor environments

    , Article Advances in Structural Engineering ; 2020 Bazli, M ; Zhao, X. L ; Jafari, A ; Ashrafi, H ; Raman, R. K. S ; Bai, Y ; Khezrzadeh, H ; Sharif University of Technology
    SAGE Publications Inc  2020
    Abstract
    This article presents an investigation on the durability of different glass-fibre-reinforced polymer composites when subjected to harsh outdoor conditions, including freeze/thaw cycles, ultraviolet radiation and moisture, as well as when used with seawater sea-sand concrete for construction applications. To achieve this, the effects of a number of parameters, including the environment of exposure, exposure time, profile cross-sectional configuration and orientation of fibres, on the mechanical properties of different glass-fibre-reinforced polymer composites were studied. To investigate the degradation of the mechanical properties, three-point bending, compression and tension tests were... 

    Mechanical properties of pultruded GFRP profiles under seawater sea sand concrete environment coupled with UV radiation and moisture

    , Article Construction and Building Materials ; Volume 258 , 2020 Bazli, M ; Zhao, X. L ; Jafari, A ; Ashrafi, H ; Bai, Y ; Singh Raman, R. K ; Khezrzadeh, H ; Sharif University of Technology
    Elsevier Ltd  2020
    Abstract
    In this research, the mechanical properties of various glass fibre reinforced polymer (GFRP) pultruded profiles exposed to seawater sea sand concrete (SWSSC) and its combination with UV radiation and water vapour condensation were studied. The effect of different conditions, duration of conditioning, and the profile cross-section configuration on the mechanical properties were investigated. Three-point bending, tension, and compression tests were carried out to obtain the mechanical properties, including flexural, tensile and compressive strengths and tensile elastic modulus. Furthermore, in order to scrutiny the mechanisms and extent of damage, scanning electron microscopy (SEM) was carried... 

    Analysis and simulation of ring resonator silicon electro-optic modulators based on PN junction in reverse bias

    , Article Optical Engineering ; Vol. 53, issue. 12 , 2014 ; ISSN: 00913286 Jafari, O ; Akbari, M ; Sharif University of Technology
    2014
    Abstract
    The theory of silicon optical modulators of ring resonators based on PN diode in reverse bias is primarily discussed. It secondarily provides a full-featured simulator to investigate the behavior of such modulators. Wave equation for ring structure will be solved by using the conformal transformation method and the matrix method as it was used to analyze bent planar optical waveguides. Power coupling between ring and straight waveguides will be calculated by coupled theory of nonparallel waveguides based on experimental results. The time response demonstrates the capability of this device to operate correctly at up to 10 Gbs-1 bitrate, and the frequency spectrum analysis of device shows a >... 

    Neural network-based brain tissue segmentation in MR images using extracted features from intraframe coding in H.264

    , Article Proceedings of SPIE - The International Society for Optical Engineering, 9 December 2011 through 10 December 2011, Singapore ; Volume 8349 , December , 2012 ; 0277786X (ISSN) ; 9780819490254 (ISBN) Jafari, M ; Kasaei, S ; Sharif University of Technology
    2012
    Abstract
    Automatic brain tissue segmentation is a crucial task in diagnosis and treatment of medical images. This paper presents a new algorithm to segment different brain tissues, such as white matter (WM), gray matter (GM), cerebral spinal fluid (CSF), background (BKG), and tumor tissues. The proposed technique uses the modified intraframe coding yielded from H.264/(AVC), for feature extraction. Extracted features are then imposed to an artificial back propagation neural network (BPN) classifier to assign each block to its appropriate class. Since the newest coding standard, H.264/AVC, has the highest compression ratio, it decreases the dimension of extracted features and thus yields to a more... 

    Automatic brain tissue detection in MRI images using seeded region growing segmentation and neural network classification

    , Article Australian Journal of Basic and Applied Sciences ; Volume 5, Issue 8 , 2011 , Pages 1066-1079 ; 19918178 (ISSN) Jafari, M ; Kasaei, S ; Sharif University of Technology
    2011
    Abstract
    This paper presents a neural network-based method for automatic classification of magnetic resonance images (MRI) of brain under three categories of normal, lesion benign, and malignant. The proposed technique consists of six subsequent stages; namely, preprocessing, seeded region growing segmentation, connected component labeling (CCL), feature extraction, feature Dimension Reduction, and classification. In the preprocessing stage, the enhancement and restoration techniques are used to provide a more appropriate image for the subsequent automated stages. In the second stage, the seeded region growing segmentation is used for partitioning the image into meaningful regions. In the third... 

    Microstructure generation of severely deformed materials using Voronoi diagram in Laguerre geometry: Full algorithm

    , Article Computational Materials Science ; Volume 50, Issue 9 , July , 2011 , Pages 2698-2705 ; 09270256 (ISSN) Jafari, R ; Kazeminezhad, M ; Sharif University of Technology
    2011
    Abstract
    A new Voronoi diagram in Laguerre geometry based on closed-pack non-overlapping circles was proposed. This diagram was used to simulate microstructure of severely deformed materials at different applied strains. Grains size and their fractions were introduced by controlling the size and distribution of nuclei. Edge number distribution and neighboring cells edge number along with area distribution of the simulated Voronoi cells were determined. The edge number distribution was observed to fit gamma distribution more accurately. However, due to high inhomogeneity in the microstructure of the deformed samples at low strains, edge number distribution could not be matched by any distribution... 

    Three-qubits ground state and thermal entanglement of anisotropic Heisenberg (XXZ) and Ising models with Dzyaloshinskii-Moriya interaction

    , Article International Journal of Quantum Information ; Volume 9, Issue 4 , 2011 , Pages 1057-1079 ; 02197499 (ISSN) Jafari, R ; Langari, A ; Sharif University of Technology
    2011
    Abstract
    We have studied the symmetric and non-symmetric pairwise ground state and thermal entanglement in three-qubits system. We have considered the anisotropic Heisenberg (XXZ) model in the presence of DzyaloshinskiiMoriya (DM) interaction in addition to the Ising model in a magnetic field with DM interaction. We have found that the increment of DM interaction and magnetic field can enhance and reduce the entanglement of the system. We have shown that the non-symmetric pairwise state has higher value concurrence and critical temperature (above which the entanglement vanishes) than the symmetric pairwise one. For the negative anisotropy, the non-symmetric entanglement is a monotonic function of DM... 

    Fibre position effects on the operation of opto-pair fibre displacement sensors

    , Article Optics and Laser Technology ; Volume 43, Issue 4 , 2011 , Pages 814-819 ; 00303992 (ISSN) Jafari, R ; Golnabi, H ; Sharif University of Technology
    2011
    Abstract
    In this article, two optical-fibre probes used in displacement measurements are reported. In one arrangement, two optical fibres with protective buffer jackets are placed together, while in the second arrangement, the protective buffer jackets are removed and the two fibres are placed with the claddings in contact, with a concomitant smaller centrecentre distance. As the core and cladding diameters are the same in both probes, the effect of the centrecentre distance on double-fibre designs can be investigated. The reflected output powers are recorded for the probes as a function of the axial distance from a reflective surface. A theoretical model is also implemented, which considers the...