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    Refractive index correction in optical coherence tomography images of multilayer tissues

    , Article Journal of Biomedical Optics ; Volume 23, Issue 7 , 2018 ; 10833668 (ISSN) Turani, Z ; Fatemizadeh, E ; Xu, Q ; Daveluy, S ; Mehregan, D ; Nasiriavanaki, M ; Sharif University of Technology
    SPIE  2018
    Abstract
    We propose an algorithm to compensate for the refractive index error in the optical coherence tomography (OCT) images of multilayer tissues, such as skin. The performance of the proposed method has been evaluated on one-and two-layer solid phantoms, as well as the skin of rat paw. © 2018 Society of Photo-Optical Instrumentation Engineers (SPIE)  

    Optical radiomic signatures derived from optical coherence tomography images improve identification of melanoma

    , Article Cancer Research ; Volume 79, Issue 8 , 2019 , Pages 2021-2030 ; 00085472 (ISSN) Turani, Z ; Fatemizadeh, E ; Blumetti, T ; Daveluy, S ; Moraes, A. F ; Chen, W ; Mehregan, D ; Andersen, P. E ; Nasiriavanaki, M ; Sharif University of Technology
    American Association for Cancer Research Inc  2019
    Abstract
    The current gold standard for clinical diagnosis of melanoma is excisional biopsy and histopathologic analysis. Approximately 15–30 benign lesions are biopsied to diagnose each melanoma. In addition, biopsies are invasive and result in pain, anxiety, scarring, and disfigurement of patients, which can add additional burden to the health care system. Among several imaging techniques developed to enhance melanoma diagnosis, optical coherence tomography (OCT), with its high-resolution and intermediate penetration depth, can potentially provide required diagnostic information noninvasively. Here, we present an image analysis algorithm, "optical properties extraction (OPE)," which improves the... 

    Noise reduction in OCT skin images

    , Article Progress in Biomedical Optics and Imaging - Proceedings of SPIE, 12 February 2017 through 14 February 2017 ; Volume 10137 , 2017 ; 16057422 (ISSN) ; 9781510607194 (ISBN) Turani, Z ; Fatemizadeh, E ; Adabi, S ; Mehregan, D ; Daveluy, S ; Nasiriavanaki, M ; Gimi, B ; Krol, A ; Sharif University of Technology
    2017
    Abstract
    OCT skin images suffer from artifacts. Speckle is the main artifact while the other one is called background noise. In this study, we propose an algorithm that significantly reduces the background noise before applying a speckle reduction method. The results show that the diagnostically relevant features in the images become clearer after applying the proposed method. We used sub-pixel weighted median filtering for speckle reduction. The results from background noise removal in combination with the proposed speckle reduction algorithm show a significant improvement in the clarity of diagnostically relevant features in in-vivo human skin images. © 2017 SPIE  

    A hierarchical artificial neural network for transport energy demand forecast: Iran case study

    , Article Neural Network World ; Volume 20, Issue 6 , 2010 , Pages 761-772 ; 12100552 (ISSN) Kazemi, A ; Shakouri, H .G ; Menhaj, M. B ; Mehregan, M. R ; Neshat, N ; Asgharizadeh, E ; Taghizadeh, M. R ; Sharif University of Technology
    2010
    Abstract
    This paper presents a neuro-based approach for annual transport energy demand forecasting by several socio-economic indicators. In order to analyze the influence of economic and social indicators on the transport energy demand, gross domestic product (GDP), population and total number of vehicles are selected. This approach is structured as a hierarchical artificial neural networks (ANNs) model based on the supervised multi-layer perceptron (MLP), trained with the back-propagation (BP) algorithm. This hierarchical ANNs model is designed properly. The input variables are transport energy demand in the last year, GDP, population and total number of vehicles. The output variable is the energy... 

    The role of SCM practices in competitive advantage and firm performance: a mediating role of supply chain innovation and TQM

    , Article Tehnicki Glasnik ; Volume 17, Issue 4 , 2023 , Pages 516-523 ; 18466168 (ISSN) Mehregan, E ; Sanaei, S ; Manna, M ; Bozorgkhou, H ; Heidari, S ; Sharif University of Technology
    University North  2023
    Abstract
    The present study aimed to propose a theoretical framework that elucidates the impact of supply chain management (SCM) practices on the competitive advantage and performance of firms while considering the mediating effects of supply chain innovation and total quality management (TQM). This research article employed a descriptive correlational methodology based on a questionnaire, complemented by structural equation modelling. The study involved the participation of 279 individuals, including managers, assistants, and supply chain experts from small and medium-sized enterprises. The study findings suggest that SCM practices significantly influence TQM, supply chain innovation, competitive... 

    Universal in vivo textural model for human skin based on optical coherence tomograms

    , Article Scientific Reports ; Volume 7, Issue 1 , 2017 ; 20452322 (ISSN) Adabi, S ; Hosseinzadeh, M ; Noei, S ; Conforto, S ; Daveluy, S ; Clayton, A ; Mehregan, D ; Nasiriavanaki, M ; Sharif University of Technology
    2017
    Abstract
    Currently, diagnosis of skin diseases is based primarily on the visual pattern recognition skills and expertise of the physician observing the lesion. Even though dermatologists are trained to recognize patterns of morphology, it is still a subjective visual assessment. Tools for automated pattern recognition can provide objective information to support clinical decision-making. Noninvasive skin imaging techniques provide complementary information to the clinician. In recent years, optical coherence tomography (OCT) has become a powerful skin imaging technique. According to specific functional needs, skin architecture varies across different parts of the body, as do the textural... 

    An intelligent despeckling method for swept source optical coherence tomography images of skin

    , Article Medical Imaging 2017: Biomedical Applications in Molecular, Structural, and Functional Imaging, 12 February 2017 through 14 February 2017 ; Volume 10137 , 2017 ; 16057422 (ISSN); 9781510607194 (ISBN) Adabi, S ; Mohebbikarkhoran, H ; Mehregan, D ; Conforto, S ; Nasiriavanaki, M ; Alpinion Medical Systems; The Society of Photo-Optical Instrumentation Engineers (SPIE) ; Sharif University of Technology
    SPIE  2017
    Abstract
    Optical Coherence Optical coherence tomography is a powerful high-resolution imaging method with a broad biomedical application. Nonetheless, OCT images suffer from a multiplicative artefacts so-called speckle, a result of coherent imaging of system. Digital filters become ubiquitous means for speckle reduction. Addressing the fact that there still a room for despeckling in OCT, we proposed an intelligent speckle reduction framework based on OCT tissue morphological, textural and optical features that through a trained network selects the winner filter in which adaptively suppress the speckle noise while preserve structural information of OCT signal. These parameters are calculated for... 

    The use of optical coherence tomography to analyze the efficacy of skin care products

    , Article Photonics in Dermatology and Plastic Surgery 2018, 27 January 2018 through 28 January 2018 ; Volume 10467 , 2018 ; 16057422 (ISSN); 9781510614192 (ISBN) Irani, S ; Turani, Z ; Fotouhi, A ; Daveluy, S ; Mehregan, D ; Chen, W ; Gelovani, J ; Nasiriavanaki, M ; The Society of Photo-Optical Instrumentation Engineers (SPIE) ; Sharif University of Technology
    SPIE  2018
    Abstract
    Background: Optical coherence tomography (OCT) is an imaging method that provides real time in situ visualization of human tissue at sub-micrometer resolution. Prior research shows OCT is suitable for imaging the epidermis. Method: In this study, we utilized OCT images to noninvasively measure the quantitative effect of a specialized antiaging product compared with a petrolatum control in a split-face trial. The images acquired with OCT were analyzed to determine the average surface roughness, Ra, and surface roughness depth, Rz, of the imaged skin. These values were measured over the duration of a 28-day trial. Results: The petrolatum treated skin showed a 2.1% and 2.9% decrease in Ra and... 

    Dose-dependent effects of nanoscale graphene oxide on reproduction capability of mammals

    , Article Carbon ; Volume 95 , December , 2015 , Pages 309-317 ; 00086223 (ISSN) Akhavan, O ; Ghaderi, E ; Hashemi, E ; Akbari, E ; Sharif University of Technology
    Elsevier Ltd  2015
    Abstract
    In vivo dose-dependent effects of nanoscale graphene oxide (NGO) sheets on reproduction capability of Balb/C mice were investigated. Biodistribution study of the NGO sheets (intravenously injected into male mice at dose of ∼2000 μg/mL or 4 mg/kg of body weight) showed a high graphene uptake in testis. Hence, in vivo effects of the NGO sheets on important characteristics of spermatozoa (including their viability, morphology, kinetics, DNA damage and chromosomal aberration) were evaluated. Significant in vivo effects was found at the injected concentrations ≥200 μg/mL after (e.g., ∼45% reduction in sperm viability and motility at 2000 μg/mL). Observation of remarkable DNA fragmentations and... 

    Accelerated differentiation of neural stem cells into neurons on ginseng-reduced graphene oxide sheets

    , Article Carbon ; Volume 66 , January , 2014 , Pages 395-406 Akhavan, O ; Ghaderi, E ; Abouei, E ; Hatamie, S ; Ghasemi, E ; Sharif University of Technology
    2014
    Abstract
    Asian red ginseng was used for green reduction of chemically exfoliated graphene oxide (GO) into reduced graphene oxide (rGO). The reduction level and electrical conductivity of the ginseng-rGO sheets were comparable to those of hydrazine-rGO ones. Reduction by ginseng resulted in repairing the sp 2 graphitic structure of the rGO, while hydrazine-rGO showed more defects and/or smaller aromatic domains. The ginseng-rGO sheets presented a better stability against aggregation than the hydrazine-rGO ones in an aqueous suspension. Whilst the hydrophobic hydrazine-rGO films exhibited no toxicity against human neural stem cells (hNSCs), the hydrophilic GO and ginseng-rGO films (as more... 

    Contested framings and policy controversies: Analysing biosafety policy-making in Iran

    , Article Science and Public Policy ; Volume 40, Issue 5 , 2013 , Pages 616-627 ; 03023427 (ISSN) Kashani, E. S ; Millstone, E ; Sharif University of Technology
    2013
    Abstract
    Vigorous debates have taken place within and between many countries about regulatory policy regimes covering the assessment and approval of genetically modified (GM) crops. In Iran, a very vigorous and hotly contested policy debate concerning legislation covering GM crops occurred between 2004 and 2009, but it was confined within government circles with almost no public discussion. This paper analyses the Iranian policy-making process in the period 2006-9. It explains how and why a stalemate arose in disputes between ministries and departments. The chosen analytical framework draws mainly on the regulation of technological risks and the analysis of public policy-making. It deploys the... 

    On the possible volumes of μ-way latin trades

    , Article Aequationes Mathematicae ; Volume 63, Issue 3 , 2002 , Pages 303-320 ; 00019054 (ISSN) Adams, P ; Billington, E. J ; Bryant, D. E ; Mahmoodian, E. S ; Sharif University of Technology
    Birkhauser Verlag Basel  2002
    Abstract
    A μ-way latin trade of volume s is a set of μ partial latin rectangles (of inconsequential size) containing exactly the same s filled cells, such that if cell (i, j) is filled, it contains a different entry in each of the μ partial latin rectangles, and such that row i in each of the μ partial latin rectangles contains, set-wise, the same symbols and column j, likewise. In this paper we show that all μ-way latin trades with sufficiently large volumes exist, and state some theorems on the non-existence of μ-way latin trades of certain volumes. We also find the set of possible volumes (that is, the volume spectrum) of μ-way latin trades for μ = 4 and 5. (The case μ = 2 was dealt with by Fu,... 

    The three-way intersection problem for latin squares

    , Article Discrete Mathematics ; Volume 243, Issue 1-3 , 2002 , Pages 1-19 ; 0012365X (ISSN) Adams, P ; Billington, E. J ; Bryant, D. E ; Mahmoodian, E. S ; Sharif University of Technology
    2002
    Abstract
    The set of integers k for which there exist three latin squares of order n having precisely k cells identical, with their remaining n2 -k cells different in all three latin squares, denoted by I3[n], is determined here for all orders n. In particular, it is shown that I3[n] = {0,.,n2 -15}U [n2 - 12,n2-9,n2], for n ≫8. ©2002 Eisevier Science B.V. All rights reserved  

    Integration of spatial fuzzy clustering with level set for segmentation of 2-D angiogram

    , Article IECBES 2014, Conference Proceedings - 2014 IEEE Conference on Biomedical Engineering and Sciences: "Miri, Where Engineering in Medicine and Biology and Humanity Meet", 8 December 2014 through 10 December 2014 ; December , 2015 , Pages 309-314 ; 9781479940844 (ISBN) Ghalehnovi, M ; Zahedi, E ; Fatemizadeh, E ; Sharif University of Technology
    Institute of Electrical and Electronics Engineers Inc  2015
    Abstract
    Coronary angiography is a vital instrument to detect the prevailing of vascular diseases, and accurate vascular segmentation acts a crucial role for proper quantitative analysis of the vascular tree morphological features. Level set methods are popular for segmenting the coronary arteries, but their performance is related to suitable start-up and optimum setting of regulating parameters, essentially done manually. This research presents a novel fuzzy level set procedure with the objective of segmentation of the coronary artery tree in 2-D X-ray angiography as automatically. It is clever to clearly develop from the early segmentation with spatial fuzzy grouping. The adjusting parameters of... 

    Deep relative attributes

    , Article 13th Asian Conference on Computer Vision, ACCV 2016, 20 November 2016 through 24 November 2016 ; Volume 10115 LNCS , 2017 , Pages 118-133 ; 03029743 (ISSN); 9783319541921 (ISBN) Souri, Y ; Noury, E ; Adeli, E ; Sharif University of Technology
    Springer Verlag  2017
    Abstract
    Visual attributes are great means of describing images or scenes, in a way both humans and computers understand. In order to establish a correspondence between images and to be able to compare the strength of each property between images, relative attributes were introduced. However, since their introduction, hand-crafted and engineered features were used to learn increasingly complex models for the problem of relative attributes. This limits the applicability of those methods for more realistic cases. We introduce a deep neural network architecture for the task of relative attribute prediction. A convolutional neural network (ConvNet) is adopted to learn the features by including an... 

    A public code for astrometric microlensing with contour integration

    , Article Monthly Notices of the Royal Astronomical Society ; Volume 505, Issue 1 , 2021 , Pages 126-135 ; 00358711 (ISSN) Bozza, V ; Khalouei, E ; Bachelet, E ; Sharif University of Technology
    Oxford University Press  2021
    Abstract
    We present the first public code for the calculation of the astrometric centroid shift occurring during microlensing events. The computation is based on the contour integration scheme and covers single and binary lensing of finite sources with arbitrary limb darkening profiles. This allows for general detailed investigations of the impact of finite source size in astrometric binary microlensing. The new code is embedded in version 3.0 of vbbinarylensing, which offers a powerful computational tool for extensive studies of microlensing data from current surveys and future space missions. © 2021 The Author(s) Published by Oxford University Press on behalf of Royal Astronomical Society  

    Toward electrically tunable, lithography-free, ultra-thin color filters covering the whole visible spectrum

    , Article Scientific Reports ; Volume 8, Issue 1 , 2018 ; 20452322 (ISSN) Aalizadeh, M ; Serebryannikov, A. E ; Khavasi, A ; Vandenbosch, G. A. E ; Ozbay, E ; Sharif University of Technology
    Nature Publishing Group  2018
    Abstract
    The possibility of real-time tuning of optical devices has attracted a lot of interest over the last decade. At the same time, coming up with simple lithography-free structures has always been a challenge in the design of large-area compatible devices. In this work, we present the concept and the sample design of an electrically tunable, lithography-free, ultra-thin transmission-mode color filter, the spectrum of which continuously covers the whole visible region. A simple Metal-Insulator-Metal (MIM) cavity configuration is used. It is shown that using the electro-optic dielectric material of 4-dimethyl-amino-N-methyl-4-stilbazoliumtosylate (DAST) as the dielectric layer in this... 

    A novel method for modeling the magnetizing yoke

    , Article Electromagnetics ; Volume 30, Issue 3 , 2010 , Pages 297-308 ; 02726343 (ISSN) Ravanbod, H ; Norouzi, E
    2010
    Abstract
    Magnetic flux leakage is the most widely used method for oil and gas pipeline non destructive testing. The saturation level of the sample under test has a significant effect on its efficiency; therefore, the magnetizing yoke requires an elaborate design. The finite element method is the conventional approach used for this purpose, but it is very time consuming. In this article, a neuro-fuzzy method is presented to model the behavior of the magnetizing yoke. Modeling a few different designs with the finite element method and using the results for training the neuro-fuzzy model eradicates the necessity of modeling a huge number of designs with the finite element method. The acquired... 

    On decomposing complete tripartite graphs into 5-cycles

    , Article Australasian Journal of Combinatorics ; Volume 54, Issue 2 , 2012 , Pages 289-301 ; 10344942 (ISSN) Alipour, S ; Mahmoodian, E. S ; Mollaahmadi, E ; Sharif University of Technology
    AJC  2012
    Abstract
    The problem of finding necessary and sufficient conditions to decompose a complete tripartite graph K(r, s, t) into 5-cycles was first considered by Mahmoodian and Mirzakhani (1995). They stated some necessary conditions and conjectured that these conditions are also sufficient. Since then, many cases of the problem have been solved by various authors; however the case when the partite sets r ≤ s ≤ t have odd and distinct sizes remains open. A necessary condition is t ≤ 3r. Billington and Cavenagh (2011) have shown that when r, s, and t are all odd and r ≤ s ≤ t ≤ κr, where κ ≈ 1.0806, then the conjectured necessary conditions for decomposing are also sufficient. We extend this result... 

    Ultra-sensitive detection of leukemia by graphene

    , Article Nanoscale ; Vol. 6, issue. 24 , Dec , 2014 , p. 14810-14819 Akhavan, O ; Ghaderi, E ; Hashemi, E ; Rahighi, R ; Sharif Universit of Technology
    2014
    Abstract
    Graphene oxide nanoplatelets (GONPs) with extremely sharp edges (lateral dimensions ∼20-200 nm and thicknesses <2 nm) were applied in extraction of the overexpressed guanine synthesized in the cytoplasm of leukemia cells. The blood serums containing the extracted guanine were used in differential pulse voltammetry (DPV) with reduced graphene oxide nanowall (rGONW) electrodes to develop fast and ultra-sensitive electrochemical detection of leukemia cells at leukemia fractions (LFs) of ∼10-11 (as the lower detection limit). The stability of the DPV signals obtained by oxidation of the extracted guanine on the rGONWs was studied after 20 cycles. Without the guanine extraction, the DPV peaks...