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Inserting the effects of ion channels in mean field models: Application to generation of anesthetic slow waves
, Article EUROCON 2005 - The International Conference on Computer as a Tool, Belgrade, 21 November 2005 through 24 November 2005 ; Volume I , 2005 , Pages 378-381 ; 142440049X (ISBN); 9781424400492 (ISBN) ; Senhadji, L ; Shamsollahi, M. B ; Sharif University of Technology
2005
Abstract
In this paper, effects of general anesthesia on the electroencephalogram (EEC) has been modeled with an enhanced physiological mean field theory of electrocortical activity. Enhancement is done by inserting two intrinsic ion channels (IKNa and IAR) in Liley's mean field model. In addition to excitatory and inhibitory synapses, intrinsic ion channels can generate or manipulate the brain rhythms. IKNa and IAR can produce slow brain rhythms (delta band frequency) in deep levels of anesthesia. We represent the activities of each mentioned ion channels by cascading a nonlinear function and a first order low pass filter. Linearized and numerical solutions of the modified model show that the power...
Sleep spindle detection in sleep EEG signal using sparse bump modeling
, Article 2011 1st Middle East Conference on Biomedical Engineering, MECBME 2011, Sharjah, 21 February 2011 through 24 February 2011 ; 2011 , Pages 196-199 ; 9781424470006 (ISBN) ; Ghanbari, Z ; Molaee-Ardekani, B ; Shamsollahi, M. B ; Penzel, T ; Sharif University of Technology
2011
Abstract
Sleep spindle is the hallmark of second stage of sleep in human being, which is defined as a rhythmic sequence with waxing and waning waves, whose frequency is approximately between 8 to 14 Hz, and its time duration is between 0.5 to 2 seconds. Bump modeling is a method for extracting regions with higher amounts of energy in a related time-frequency map. The bump model of the sleep spindle consists of a group of high energy bumps concentrating in approximately 8 to 14 Hz frequency band. In this study, it will be shown that the power of bumps of EEG can be used in automated detection of sleep spindle. The presented method sensitivity is 99.41% which shows high correctly detection rate, and...
Brain activity modeling in general anesthesia: Enhancing local mean-field models using a slow adaptive firing rate
, Article Physical Review E - Statistical, Nonlinear, and Soft Matter Physics ; Volume 76, Issue 4 , 2007 ; 15393755 (ISSN) ; Senhadji, L ; Shamsollahi, M. B ; Vosoughi Vahdat, B ; Wodey, E ; Sharif University of Technology
American Physical Society
2007
Abstract
In this paper, an enhanced local mean-field model that is suitable for simulating the electroencephalogram (EEG) in different depths of anesthesia is presented. The main building elements of the model (e.g., excitatory and inhibitory populations) are taken from Steyn-Ross and Bojak and Liley mean-field models and a new slow ionic mechanism is included in the main model. Generally, in mean-field models, some sigmoid-shape functions determine firing rates of neural populations according to their mean membrane potentials. In the enhanced model, the sigmoid function corresponding to excitatory population is redefined to be also a function of the slow ionic mechanism. This modification adapts the...
An investigation on different EEG patterns from awake to deep Anesthesia: Application to improve methods of determining depth of anesthesia
, Article 10th World Congress on Medical Physics and Biomedical Engineering, WC 2006, 27 August 2006 through 1 September 2006 ; Volume 14, Issue 1 , 2007 , Pages 909-912 ; 16800737 (ISSN) ; Shamsollahi, M. B ; Senhadji, L ; Wodey, E ; Vosoughi Vahdat, B ; Sharif University of Technology
Springer Verlag
2007
Abstract
In this article we investigate on the evolution of EEG spectra over different depth of anesthesia from deep to very light anesthesia where immediately followed by waking. Low frequency components of EEG spectra (delta band) are examined using two different methods. One is based on Fourier transform of the low pass filtered EEG and the other is based on extraction of a kind of negative peak slow wave activity (SWA) and estimating its Fourier transform. Results show that in transition from deep to light anesthesia, not all energies of delta frequencies are decreased. There are some particular frequencies that (e.g. ~0.7 Hz) their power may even be increased by reduction of anesthetic drug...
Delta waves differently modulate high frequency components of EEG oscillations in various unconsciousness levels
, Article 29th Annual International Conference of IEEE-EMBS, Engineering in Medicine and Biology Society, EMBC'07, Lyon, 23 August 2007 through 26 August 2007 ; 2007 , Pages 1294-1297 ; 05891019 (ISSN); 1424407885 (ISBN); 9781424407880 (ISBN) ; Senhadji, L ; Shamsollahi, M. B ; Wodey, E ; Vosoughi Vahdat, B ; Sharif University of Technology
Institute of Electrical and Electronics Engineers Inc
2007
Abstract
In this paper we investigate the modulation properties of high frequency EEG activities by delta waves during various depth of anesthesia. We show that slow and fast delta waves (0-2 Hz and 2-4 Hz respectively) and high frequency components of the EEG (8-20 Hz) are correlated with each other and there is a kind of phase locking between them that varies with depth of anesthesia. Our analyses show that maximum amplitudes of high frequency components of the EEG signal are appeared in different phases of slow and fast delta waves when the concentration of Desflurane and Propofol anesthetic agents varies in a patient. There are some slight differences in using slow and fast components of delta...
Designing a planar vector field to investigate the role of a slow variable in an enhanced mean-field model during general anesthesia
, Article 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'06, New York, NY, 30 August 2006 through 3 September 2006 ; 2006 , Pages 6121-6124 ; 05891019 (ISSN); 1424400325 (ISBN); 9781424400324 (ISBN) ; Shamsollahi, M. B ; Senhadji, L ; Vosoughi Vahdat, B ; Wodey, E ; Sharif University of Technology
Institute of Electrical and Electronics Engineers Inc
2006
Abstract
Local mean-field models (MFMs) describe regional brain activities by some connected differential equations. In an overall view, constituting variables of these differential equations can be divided to very fast, fast and slow variables. In this article we propose a method that can be used to determine role of a slow variable in behavior of MFMs. Very fast variables can be adiabatically removed from the equations. Isoclines of fast and slow variables and their corresponding vector field can provide valuable information about model behavior and role of the slow variable in it. The vector field of our interested MFM that is an enhanced MFM designed specially for general anesthesia, is a 3D...
Investigation of the modulation between EEG alpha waves and slow/fast delta waves in children in different depths of Desflurane anesthesia
, Article IRBM ; Volume 31, Issue 1 , 2010 , Pages 55-66 ; 19590318 (ISSN) ; Shamsollahi, M. B ; Tirel, O ; Vosoughi Vahdat, B ; Wodey, E ; Senhadji, L ; Sharif University of Technology
2010
Abstract
Objectives: Investigation of the amplitude modulation of alpha-band EEG oscillations (i.e., grouping of alpha-band activities) by delta-band EEG activities in various depths of anesthesia (DOA). Methods: This modulation, which is a sort of phase dependent amplitude modulation, is studied in 10 children in various depths of Desflurane anesthesia. Two parameters are defined to quantify the modulation: strength of modulation (SOM) and phase of modulation (POM). SOM indicates to what extent delta and alpha activities are related to each other, and POM is the delta phase in which the alpha amplitude is maximal. These parameters are analyzed in different DOA for various formations of delta...
“Detection and Analysis of Spindle and K-complex Patterns and SWS in Sleep EEG Signals”
, M.Sc. Thesis Sharif University of Technology ; Shamsollahi, Mohammad Bagher (Supervisor) ; Molaee-Ardekani, Behnam (Co-Advisor)
Abstract
According to necessity of analysis and detection of K-complexes and Sleep Spindles patterns which are the hallmarks of the second stage of sleep, in this thesis we aimed to introduce new methods in analysis and detection of aforementioned patterns in order to improve the results of previous methods. Also, we tried to find the relation between slow oscillations and spindles activity. In this project, in order to analysis the frequency components of Sleep Spindle, Bump modeling and STFT were used. Both of these methods confirm the spindles’ 8 Hz to 15 Hz frequency band and also their time duration between 0.5-2 seconds. On the other hand, we used modified matched filtering and also bump...
Drug Effect on Brain Functional Connectivity Using EEG Signals
, M.Sc. Thesis Sharif University of Technology ; Shamsollahi, Mohammad Bagher (Supervisor) ; Molaee-Ardekani, Behnam (Co-Advisor)
Abstract
In this study Donepezil effect on the brain functional connectivity investigated. In order to construct the brain functional network, EEG artifacts must firstly be removed because this step has important effects on the final interpretation of the results. Therefor, a new artifact removing method is proposed and better performance of the proposed method compared to other existing methods is stated using quantitative evaluations. After artifact removal, the functional brain network is extracted using conventional methods that were applied in the similar previous studies. The reasons for using conventional methods are their simplicity and reliability. Furtheremore, to study the recent...
Automatic ocular correction in EEG recordings using maximum likelihood estimation
, Article IEEE International Symposium on Signal Processing and Information Technology, IEEE ISSPIT 2013, Athens ; 2013 , Pages 164-169 ; Molaee Ardekani, B ; Shamsollahi, M. B ; Leroy, C ; Derambure, P ; Sharif University of Technology
IEEE Computer Society
2013
Abstract
The electrooculogram (EOG) artifact is one of the main contaminators of electroencephalographic recording (EEG). EOG can make serious problems in results and interpretations of EEG processing. Rejecting contaminated EEG segments result in an unacceptable data loss. Many methods were proposed to correct EOG artifact mainly based on regression and blind source separation (BSS). In this study, we proposed an automatic correction method based on maximum likelihood estimation. The proposed method was applied to our simulated data (real artifact free EEG plus controlled EOG) and results show that this method gives superior performance to Schlögl and SOBI methods
General consideration for button-BPM
, Article IPAC 2014: Proceedings of the 5th International Particle Accelerator Conference ; Jul , 2014 , p. 3537-3540 ; Samadfam, M ; Mohammadzadeh, M ; Shafiee, M ; Sharif University of Technology
2014
Abstract
In order to design Button Beam Position Monitors (BPMs) for synchrotron facilities, one algorithm by C# have been developed which can calculate all required parameters to analyze optimal design based on vacuum chamber and button dimensions. Beam position monitors are required to get beam stabilities on submicron levels. For this purpose, different parameters such as capacitance, sensitivity versus bandwidth, intrinsic resolution, induced charge and voltage on buttons are calculated. Less intrinsic resolution and high sensitivity and capacitance are desired. To calculate induced charge and voltage on each button, Poisson's equation has been solved by Green method. For sensitivities...
Create an Algorithm for Designing of Button-BPM and Striplines in a Synchrotron
, M.Sc. Thesis Sharif University of Technology ; Samadfam, Mohammad (Supervisor) ; Mohammadzadeh, Mohammad (Co-Advisor)
Abstract
Beam diagnostics is an essential constituent of any accelerator. The position information of the electron beam is obtained by a set of Beam Position Monitors (BPMs), which in addition to determining the position, are used to derive information concerning lattice functions and beam dynamics. To design of Button Beam Position Monitor(BPM) for a Synchrotron Light Source, to get beam stabilities on submicron levels, preliminary studies were done to have optimal design. We present an algorithem which caculate all required parameteres for different design of button BPMs. To calculate induced charge and voltage on each button, Poisson's equation has been solved by Green method. For sensivity...
Comparison of numerical formulations for Two-phase flow in porous media
, Article Geotechnical and Geological Engineering ; Volume 28, Issue 4 , 2010 , Pages 373-389 ; 09603182 (ISSN) ; Raeesi Ardekani, D ; Sharif University of Technology
2010
Abstract
Numerical approximation based on different forms of the governing partial differential equation can lead to significantly different results for two-phase flow in porous media. Selecting the proper primary variables is a critical step in efficiently modeling the highly nonlinear problem of multiphase subsurface flow. A comparison of various forms of numerical approximations for two-phase flow equations is performed in this work. Three forms of equations including the pressure-based, mixed pressure-saturation and modified pressure-saturation are examined. Each of these three highly nonlinear formulations is approximated using finite difference method and is linearized using both Picard and...
Model-driven Approach for Developing Adaptive Web Systems
,
M.Sc. Thesis
Sharif University of Technology
;
Ramsin, Raman
(Supervisor)
Abstract
Due to the expansion of web applications, they have been gradually enhanced as to their usage of information and services. As a result, web users are faced with growing complexity, which has raised concerns not only on the quality and validity of information, but also on how the information is presented. This has resulted in the advent of a new branch of web systems called adaptive web systems, which focus on the adaptation of content, presentation and navigation based on the properties of the runtime environment and the preferences of the users. Generally, the concept of adaptivity can be appeared in the fields of non-functional services and requirements. Although this research is only...
Modeling Electrical Activities of the Brain and Analysis of the EEG in General Anesthesia
, M.Sc. Thesis Sharif University of Technology ; Shamsollahi, Mohammad Bagher (Supervisor)
Abstract
In this thesis, an enhanced local mean-field (MF) model that is suitable for simulating the electroencephalogram (EEG) in different depths of anesthesia is presented. The main building elements of the model (e.g. excitatory and inhibitory populations) are taken from two pioneer MF models designed by Steyn-Ross et al and Bojak & Liley, and then a new slow ionic mechanism is included in the main model. Generally, in mean-field models, some sigmoid-shape functions determine firing rates of neural populations according to their mean membrane potentials. In the enhanced model, the sigmoid function corresponding to excitatory population is redefined to be also a function of the slow ionic...
Breast cancer diagnosis and classification in MR-images using multi-stage classifier
, Article ICBPE 2006 - 2006 International Conference on Biomedical and Pharmaceutical Engineering, Singapore, 11 December 2006 through 14 December 2006 ; 2006 , Pages 84-87 ; 8190426249 (ISBN); 9788190426244 (ISBN) ; Torabi, M ; Fatemizadeh, E ; Sharif University of Technology
2006
Abstract
in this paper we present an integrated classifier that is used in mammogram MR-image for classification of breast cancers and abnormalities using a Multi-stage classifier, the method developed here first classifies mammograms into normal and abnormal and then for abnormal cases determines that if the case cancer is benign or malignant and also determine the type of breast cancer. In this paper there are two main topics that must be considered. First one is selection of good features and second is designing a good structure for classifier. In this study, the features are a combination of some features that are extracted from Spatial Grey Level Dependency matrix and some statistical descriptor...
Customer Journey Analytics using Process Mining Based on the Markov Model
,
M.Sc. Thesis
Sharif University of Technology
;
Hassan Nayebi, Erfan
(Supervisor)
Abstract
The analysis of customer journeys has gained significant attention due to the critical role of customer behavior data in enhancing business decision-making and formulating strategies for customer acquisition and retention. By segmenting customers based on their journey patterns, businesses can offer personalized recommendations, thereby improving customer engagement and loyalty. Additionally, predicting the next steps in a customer’s journey based on historical data allows for timely and appropriate interventions at various touchpoints. By understanding where customers are in their journey, businesses can provide targeted recommendations that increase the likelihood of converting potential...
Theoretical and Experimental Investigation of Preparation of Distillate Water by Combination of CSP and MED Methods
, M.Sc. Thesis Sharif University of Technology ; Molaee Dehkordi, Asghar (Supervisor)
Abstract
With the depletion of fossil resources, price of these energy careers increases. Therefore, researchers investigate for other alternative choices. One of the most interesting choice is the renewable energies. These sources of energies are attractive due to either they are permanent resources or they are environmentally friendly. The most important renewable energy resource is solar energy that in fact is the source of other renewable energies. The most important and economic method of solar energy absorption is the thermal method. Common technology in thermal method is the Parabolic-Trough. But, recently a new technology have been developed called Compact Linear Fresnel Reflector (CLFR) that...
N-doped ZnO-CuO nanocomposite prepared by one-step ultrasonic spray pyrolysis and its photocatalytic activity
, Article Chemical Physics Letters ; Volume 705 , 2018 , Pages 19-22 ; 00092614 (ISSN) ; Sabour Rouhaghdam, A ; Nazari, M ; Sharif University of Technology
Elsevier B.V
2018
Abstract
Nanocomposite thin film of N-doped ZnO-CuO was deposited on glass substrate using ultrasonic spray pyrolysis method. Zinc acetate, copper acetate and ammonium acetate with different molar ratios were dissolved in water and used as precursors. A crumpled-shape morphology consisting of nanometer-sized particles was observed with FESEM. The elemental composition was evaluated with EDX analysis and the presence of nitrogen, oxygen, copper and zinc was confirmed. XRD analysis revealed the presence of ZnO and CuO crystalline phases with crystallite size of about 18 nm. The prepared nanocomposites exhibited high photocatalytic activity in degradation of methyl orange under UV light irradiation. ©...
Microstructure-Based Visco-Elastoplastic Continuum Model of Asphalt Concrete
, M.Sc. Thesis Sharif University of Technology ; Tabatabaei, Nader (Supervisor)
Abstract
Asphalt concrete is a heterogeneous and multi-phase material that consists of aggregates, asphalt binder, and pores. These components create a complex microstructure. There is no consensus on how to quantify the microstructure and the required parameters from two-dimensional images. The load transfer can be managed by aggregate-aggregate or aggregate-mastic interactions that depend on the gradation, aggregate internal structure, and asphalt binder viscoelastic properties. The most important internal structure indices affecting the behavior of HMA are aggregate orientation, contact orientation, contact length, and number of contact points. In this research, the influence of aggregate...