Sharif Digital Repository

Sharply bent DNA plays an important role in many biological processes such as gene regulation, DNA replication and recombination. DNA cyclization experiments are well suited to study of sharply bent DNA, because they are sensitive to strongly bent conformations. Results of these experiments show that short length DNA molecules are more flexible than predicted by elastic rod model. Therefore, based on these experiments, the elastic rod model is not a suitable model for explaining elastic behavior of DNA at small lengths, although it can explain DNA elasticity at large length scales. Recently, it has been shown that a new model called asymmetric elastic rod model can explain high flexibility... 

Wireless sensor network (WSN) multimedia applications impose new challenges in the design of algorithms and communication protocols for sensor networks. Indeed, wireless multimedia sensor networks (WMSNs) must provide relatively high throughput and low end-to-end delay and jitter while being energy-efficient. In view of these challenges, error control is an important mechanism which enables us to provide robust and high quality multimedia communication in WSNs. In this thesis, we first perform a comprehensive performance evaluation of different error control schemes for multimedia communication over WSNs. The results of our analysis show how wireless channel errors can affect the performance... 

Invariant manifolds are important objects in the theory of dynamical systems. The stable manifold theorem is a very important theorem about this concept which proves the existence of stable and unstable manifolds in a wide range of dynamical systems. The importance of invariant manifolds encourages us to view their pictures. It helps us to understand their bahavior. For this purpose, at first we need to approximate the invariant manifold we want to visualize. There are several algorithms designed to approximate invariant manifolds. Those algorithms approximate a set of points on an invariant manifold and then provide an approximation of the manifold by the calculated points. Visualizing an... 

The purpose of this study is the implementation of multi-model predictive control (MMPC) approach for the co-polymerization system of methyl methacrylate - vinyl acetate. Simpler development of local models and controllers and also convenience of understanding the model and controller structure are the main reasons for using this approach. In the first step, RGA analysis has been used for pairing input and output variables. Then the performance of PI controller on the system has been investigated. For designing model predictive controller (MPC) the nonlinear model has been linearized at operational point and the controller has been designed in MPC toolbox of MATLAB software R2013a. In the... 

Nowadays providing services beyond the expected performance of users has become the most competition among telecommunication companies. Increase data rate at which a user is able to use a wireless system, you know that most of these companies are competing with each other. However, due to limited power to be sent to a transmitter, the first proposal to increase the data rate of wireless data transmission has a wider bandwidth. This results in increased bandwidth demand and thus sales by the government. During these years, many researchers have tried to increase efficiency in the use of broadband transceiver. These systems due to the wide band signal transmission and high-resolution mass... 

Resin In Pulp(RIP) is One of the most important processes for separation of uranium from ore while concentration of uranium in ore is low , based on adsorption of uranium that exist in the slurry on onion exchanger resins .uranium ore is dissolved in sulfuric acid and slurry that contain uranium is produced,then this slurry enter stirred reactors and adsorption process is performed.RIP are accepted universally and now adays countries such as canada,south africa and australia use this process when concentration of uranium in slurry after leaching process is 100-500 ppm.in iran also this process is performing in ardacan-saghand mine.Kinetic of adsorption process in stirred reactors has been... 

In this thesis, stability and stabilization of fractional-order linear time invariant swarm systems are studied. In recent years it has been proved that the exact model of dynamic agents in most of the swarm systems can be modeled more accurate by fractional order differential equations. Stating the motivation of choosing this subject, the achievements of the thesis can be divided into two general parts: Investigating the stability of fractional-order swarm systems and how to stabilize such systems. After introducing the fractional-order systems and fractional-order model of swarm systems in the introduction part, the literature review is presented in Chapter 2. In Chapter 3 the results... 

Keratoconus is one of the most common optical (visual, eye) diseases that usually occurs in youth or early third decade of life. In this disease, cornea gets thin and loses it initial shape and becomes conical. Doctors use different methods for its treatment including use of glasses, contact lenses (hard or soft), cornea transplantation and also cross linking of cornea. Each of these methods have their limitations, on the other hand, considering that this disease progresses and intensifies, ophthalmologists use corneal ring implant surgery for the treatment of this disease in its advanced levels. A good ring implant in corneal causes increased strength and also cause corneal to get back to... 

A prismatic high temperature gas-cooled reactor (HTGR), which is a graphite moderated, helium-cooled reactor, is a promising candidate for next generation nuclear power plant in that it enables applications, such as hydrogen production or process heat for petrochemical by supplying heat with core outlet temperatures as high as 1000°C. A Thermal Hydraulic Analysis Code (THAC) for gas-cooled reactors has been developed. THAC implicitly solves heat transfer equation of fuel, graphite block and helium. Three types of fuel pins were considered; solid fuel pin, fuel pins with inside holes and annular fuels with coolant flow from its inside and outside surfaces. THAC predicts axial and radial... 

In recent years, the user interface of web-based applications has become more and more complicated. Various technologies, architectures, and tools are being used to create a modern user interface. Users interact directly with the user interface, so its functionality has a significant impact on their satisfaction and it is required to design special test suites for the user interface. Furthermore, we need a method to measure the quality and effectiveness of test suites. An effective test suite is a test suite which is able to detect real faults. But this definition is ambiguous, and hence, not practical. A method called Mutation Testing solves this problem and instead of real faults, uses... 

High-quality online services demand reliable and fast packet delivery at the network layer. However, clear evidence documents the existence of compromised routers in the ISP and enterprise networks, threatening network availability and reliability. A compromised router can stealthily drop, modify, inject, or delay packets in the forwarding path to launch Denial-of-Service, surveillance, man-in-the-middle attacks, etc. So researches tried to create intrusion detection methods to identify adversarial routers and switches. To this end, data-plane fault localization (FL) aims to identify faulty links and is an effective means of achieving high network availability. FL protocols use... 

Confining nematic liquid crystal between two curved boundary conditions while the nematic molecules have a degenerate planar anchoring leads to complex and beautiful textures of molecular disparagement(defect) in the bulk and on the surfaces. Such the liquid crystal shells are made with double-emulsion techniques in microfluidic devices have provided applications for micro-scale colloidal linkers.In this work, we have numerically minimized the elastic energy in one-constant approximation in present of Fournier’s degenerate surface potential with finite element method. The nematic shell is confined between two spherical surfaces that we have studied the final energies and their related... 

A liquid crystal is a state of matter composed of highly anisotropic building blocks. When liquid crystals are exposed to surfaces with given shapes and anchoring conditions, the orientation of their molecules gets spatially disordered and topological defects may form in the system. The interplay between liquid crystals and the geometry and topology of the colloidal particles has motivated extensive recent studies.In this thesis, we present the numerical modeling results for two faceted colloidal particles in a thermotropic nematic liquid crystal. To obtain the equilibrium nematic field with a finiteelement method, we numerically minimize the free energy of the system that based on the... 

Providing high bandwidth network infrastructures for ever increasing need of data transport is of great importance. The underling infrastructure for many communication services such as GSM/3G/4G mobile networks and Internet services is Synchronous Digital Hierarchy (SDH) optical transport systems. SDH are standardized protocols that multiplex multiple lower rate digital bit streams, such as E1 and Ethernet, and transfer them synchronously over optical fiber using lasers or LEDs. In addition to high data transfer rates, flexible network management and protection mechanisms have great importance, hence are part of SDH standards. In order to obtain flexible network architecture and protected... 

Development of Smart Grid and deployment of smart meters in large scale has raised a lot of concerns regarding customers’ privacy. Consequently, several schemes have been proposed to overcome the above mentioned issue. These schemes mainly rely on data aggregation as a method of protecting users’ privacy from the grid operators. However, the main problem with most of these schemes is the fact that they require a large amount of processing power at the meter side. This, together with the fact that smart meters don’t usually have a powerful processor, can cause the unavailability of smart meter data at the required time for operators of the grid, and at the same time disables smart meters from... 

Secure routing is a major key to service maintenance in wireless ad hoc networks. Ad hoc nature exposes the network to several types of node misbehavior or attacks. Wormhole attack is one of the most severe active attacks to mobile ad hoc networks. Noting the resource limitations in such networks, nodes may have a tendency to behave selfishly. Selfish behavior can have drastic impacts on network performance. We have proposed a Misbehavior-Tolerant Multipath Routing protocol (MTMR) which detects and punishes all types of misbehavior such as selfish behavior, wormhole, sinkhole and grey-hole attacks. The protocol utilizes a proactive approach to enforce cooperation. In addition, it uses a... 

Today, communication sciences are advancing very rapidly; one of these advances is mobile location determination, means finding position of a mobile station. there are some method to location determination; one of these methods is Signal Strength (Power of Arrivals); In this research, Mobile Location Determination using Signal strength measurements in a Location grid will be describe; In this method there is a Mobile Location Server (MLS); In MLS, there re comparable records in database which have been collected from Location grid. When a MS needs to be located, its signaling data (fingerprint) is transmitted to MLS; In MLS, the fingerprints are compared to Data which is store in signature... 

In this study, an arbitrary Lagrangian-Eulerian (ALE) approach is incorporated with a mixed finite- volume-element (FVE) method to establish a novel moving boundary algorithm to simulate unsteady incompressible flow on non-stationary meshes. The method collects the advantages of both finite-volume and finite-element methods as well as the ALE approach in a unified algorithm capable of solving laminar, transient, and turbulent flows in fluid flow problems with moving boundaries. To enhance the robustness of the extended algorithm, we treat the convection terms at the cell faces using a physical influence upwinding scheme, while the diffusion terms are treated using bilinear finite-element...