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    Design and Fabrication of a Centrifugal Microfluidic System to DNA Extraction

    , M.Sc. Thesis Sharif University of Technology Fathi Ganje Lou, Ali (Author) ; Farhadi, Fathollah (Supervisor) ; Saadatmand, Maryam (Supervisor) ; Parsa Yeganeh, Laleh (Co-Supervisor)
    Abstract
    Deoxyribonucleic acid (DNA) extraction, as one of the most important steps in modern molecular diagnostics, is the process by which DNA is separated from intracellular materials like proteins, membranes, and other materials contained in the cell. Microfluidic technology enables sophisticated, time-consuming and costly experiments with minimal use of raw materials, time and cost and acceptable accuracy. The predominant advantages of centrifugal microfluidic systems are utilizing centrifugal force to generate propulsion without the need for a pump, and eliminating the need for experts to run the system. Various fluidic operations such as valving, mixing, metering, heating, and sample... 

    A Task Assignment Method to Reduce Aging in Multi-core Processors

    , M.Sc. Thesis Sharif University of Technology Saadatmand, Faezeh Sadat (Author) ; Miremadi, Ghassem (Supervisor)
    Abstract
    Reducing the size of transistors has dramatically increased the impacts of NBTI, HCI, and EM phenomena in comparison with decade ago. These phenomena are able to have influence on properties of different parts of a chip to make it changed gradually; including threshold voltage of a transistor and electrical conductivity of interconnections. These changes are known as the aging of a transistors that diminish the performance and reliability of a chip. A common reason that plays a significant role in all these phenomena is temperature. The temperature becomes more important when the power density increases per unit area due to decreased size of transistors, which is a trend in multi-core... 

    Fabrication, modeling and optimization of lyophilized advanced platelet rich fibrin in combination with collagen-chitosan as a guided bone regeneration membrane

    , Article International Journal of Biological Macromolecules ; Volume 125 , 2019 , Pages 383-391 ; 01418130 (ISSN) Ansarizadeh, M ; Mashayekhan, S ; Saadatmand, M ; Sharif University of Technology
    Elsevier B.V  2019
    Abstract
    In this study, lyophilized advanced platelet rich fibrin (A-PRF) was used in combination with collagen-chitosan membrane for the first time to combine advantages of both collagen and A-PRF membranes. Response surface methodology (RSM) was used to design the experimental condition and to correlate the effects of parameters, including chitosan/collagen (chit/col) weight ratio and A-PRF concentration on Young's modulus, mesenchymal stem cell (MSCs) viability and degradation rate of the membranes. Results showed that Young's modulus of the membranes was intensified by increasing chit/col weight ratio and decreasing A-PRF concentration from 3 to 8 MPa. Cell viability of MSCs was improved by both... 

    Model Checking of Stochastic Activity Networks

    , M.Sc. Thesis Sharif University of Technology Maryam Bagheri (Author) ; Movaghar, Ali (Supervisor)
    Abstract
    Modeling and performance evaluation of the real time distributed systems is a significant problem. Stochastic activity network is one of the high level models used for this purpose. This network is an extension of generalized stochastic Petri net which is more powerful and flexible than other Petri net extensions. Checking the satisfiability of properties such as performance, dependability and user's expected properties is considerable in these models. Thus, using the approaches and generating modeling and model checking tools with the mentioned purpose is attractive. A model checker automatically checks the correctness of the system behaviors as properties against the model by getting the... 

    Robust Estimation and Control of a Planet Lander

    , M.Sc. Thesis Sharif University of Technology Ahmadvand, Reza (Author) ; Kiani, Maryam (Supervisor)
    Abstract
    This study has focused on the important problem of landing on a planet as an important current and future space mission. In this regard, dynamics modeling and integrated state estimation and control problems have been investigated in different views. To this aim, first a novel concurrent representation for translational and rotational kinematics has been developed based on the extension of modified Rodrigues parameters to dual space. This parameter set, called dual modified Rodrigues parameters (DMRP), is then utilized to establish an integrated roto-translational dynamic. The proposed DMRP-based kinematics and dynamics have been verified via comparison to traditional methods of... 

    Optimal Control of Unknown Interconnected Systems via Distributed Learning

    , M.Sc. Thesis Sharif University of Technology Farjadnasab, Milad (Author) ; Babazadeh, Maryam (Supervisor)
    Abstract
    This thesis addresses the problem of optimal distributed control of unknown interconnected systems. In order to deal with this problem, a data-driven learning framework for finding the optimal centralized and the suboptimal distributed controllers has been developed via convex optimization.First of all, the linear quadratic regulation (LQR) problem is formulated into a nonconvex optimization problem. Using Lagrangian duality theories, a semidefinite program is then developed that requires information about the system dynamics. It is shown that the optimal solution to this problem is independent of the initial conditions and represents the Q-function, an important concept in reinforcement... 

    Utilizing Gaussian Processes to Learn Dynamics of Unknown Torques Acting on a Spacecraft

    , M.Sc. Thesis Sharif University of Technology Baradaran, Behdad (Author) ; Kiani, Maryam (Supervisor)
    Abstract
    Accurate and fast attitude estimation of a rigid body plays an essential role in the performance of a vehicle’s control system, especially aerospace vehicles. Ample works have been done to increase the accuracy and speed of the attitude estimation process, but all have been developed according to a model-based approach. This approach assumes that the torques acting on the body have a known dynamical model that is used for the attitude estimation. The purpose of the present research is to estimate the attitude via a model-free approach, i. e. dynamics of the torques acting on the body are no longer assumed to be known, and its learning is the next step. Thus, the problem formulation of this... 

    Stabilization and Pole-Placement by Structurally-Constrained Controllers: A Graph-Theoretic Approach

    , M.Sc. Thesis Sharif University of Technology Moushaee, Pegah (Author) ; Babazadeh, Maryam (Supervisor)
    Abstract
    This thesis presents a new approach to design structural output feedback controllers with stabilization and pole-placement at desired points on the S plane. It is assumed that the linear time-invariant system has no fixed mode corresponding to the specified control structure, outside the desired region of the closed-loop poles, such that the structural controller design problem is theoretically feasible. To this end, the structural output controller design problem is first transformed into a structurally equivalent problem based on the solution of a set of discrete linear programs. Then, by using the resultant structure, a new method is proposed for designing static and dynamic control loops... 

    Optimal Energy Trading in a Smart Grid Based on Extremum-seeking Algorithm

    , M.Sc. Thesis Sharif University of Technology Asgari, Houman (Author) ; Babazadeh, Maryam (Supervisor)
    Abstract
    Prevalent deployment of Distributed Energy Resources(DERs) in the demand side of electrical energy grids has several advantages such as greenhouse gases emission reduction, mitigation of power losses in the distribution grids and abatement of the dependency on the wholesale generation companies. At the same time, it paves the way for the advent of local interactive energy trading frameworks. In the following thesis, a distributed data-driven algorithm is developed for market-clearing in a community-based local energy market. The social welfare maximization is considered as the objective of the energy trading. The production and demand of electricity are the decision variables of sellers and... 

    Navigation and Control of a Free-Flying Satellite for Cargo Transportation and Placement in Intra-Vehicular Environment

    , M.Sc. Thesis Sharif University of Technology Moosavi, Farzan (Author) ; Kiani, Maryam (Supervisor)
    Abstract
    The main topic of this research is the navigation and control of a free-flying satellite with a robot manipulator while transferring and placing cargo on a space station. After connecting the cargo module, astronauts and robots need to deliver the available loads to the desired modules in a space station. Capturing an object or cargo is a critical issue studied extensively so far. However, delivery and placing of the cargo at the target point have not been investigated yet, to the best of the author’s knowledge; hence, this is a primary motivation for conducting the proposed research. After capturing the payload, the position and attitude of the manipulator with respect to the station’s... 

    Employing humanoid robots for teaching english language in Iranian junior high-schools [electronic resource]

    , Article International Journal of Humanoid Robotics ; Vol. 11, No. 3 (2014) 1450022 Alemi, M. (Minoo) ; Meghdari, Ali ; Ghazisaedy, Maryam ; Sharif University of Technology
    Abstract
    This paper presents the effect of robotics assisted language learning (RALL) on the vocabulary learning and retention of Iranian English as foreign language (EFL) junior high school students in Tehran, Iran. After taking a vocabulary pre-test, 46 beginner level female students at the age of 12, studying in their first year of junior-high participated in two groups of RALL (30 students) and non-RALL (16 students) in this study. The textbook used was the English book (Prospect-1) devised by the Iranian Ministry of Education for 7th graders, and the vocabulary taught and tested (pre-test and post-test) were taken from this book. Moreover, the treatment given by a teacher accompanied by a... 

    Theoretical study of diffusional release of a dispersed solute from cylindrical polymeric matrix: A novel configuration for providing zero-order release profile

    , Article Applied Mathematical Modelling ; Volume 73 , 2019 , Pages 136-145 ; 0307904X (ISSN) Khorrami Jahromi, A ; Shieh, H ; Saadatmand, M ; Sharif University of Technology
    Elsevier Inc  2019
    Abstract
    In the context of controlled release drug delivery approaches, the systems providing zero-order release kinetics have special advantages. Through employing these systems, drug concentration could be maintained within the therapeutic window over release time; thus maximum effectiveness alongside minimized side effects of the drug are achieved. However, obtaining zero-order drug release is extremely challenging. One of the main obstacles is the fact that implemented devices should be designed to overcome the decreasing mass transfer driving force, especially, in polymeric systems in which diffusion mechanism is dominant. In this study, we developed a new configuration of a polymeric matrix... 

    Analysis of Structured Controllers Stabilization: A Graph Theoretic Approach

    , M.Sc. Thesis Sharif University of Technology Mosalli, Hesamoddin (Author) ; Babazadeh, Maryam (Supervisor)
    Abstract
    In this thesis, a new method is proposed to find the class of stabilizing control structures for interconnected systems from a graphtheoretic
    perspective. The objective is to classify all possible control structures (static or dynamic), capable of stabilizing the closedloop system. The method can be formulated by using the characteristics of fixed modes of the system for arbitrary control structures.To this end, first, a method is proposed based on solving a set of discrete linear programming to determine whether a system is stabilizable via a decentralized controller. Subsequently, by solving a set of discrete linear feasibility problems, all possible stabilizing controller structures... 

    Empirical modeling of mechanical properties of modified collagen/chitosan membrane by response surface methodology

    , Article 24th Iranian Conference on Biomedical Engineering and 2017 2nd International Iranian Conference on Biomedical Engineering, ICBME 2017, 30 November 2017 through 1 December 2017 ; 2018 ; 9781538636091 (ISBN) Ansarizadeh, M ; Mashayekhan, S ; Saadatmand, M ; Khashabi, E ; Sharif University of Technology
    Institute of Electrical and Electronics Engineers Inc  2018
    Abstract
    In this study, collagen/chitosan membrane used for guided bone regeneration (GBR) was modified. Collagen and chitosan are routinely used in GBR membrane fabrication. In addition advanced platelet rich fibrin (A-PRF) is a promising substitution for fabricating membrane in dental surgery. Herein, acid soluble collagen from calf skin was extracted and characterized. The combination of A-PRF with collagen/chitosan membrane was investigated in this study. FTIR analysis revealed that chemical crosslinking using EDC/NHS was occurred. The morphology of collagen/chitosan membrane in a gradient manner of chitosan was assessed via SEM images. Response surface methodology (RSM) was used to... 

    The influence of the female reproductive tract and sperm features on the design of microfluidic sperm-sorting devices

    , Article Journal of Assisted Reproduction and Genetics ; Volume 39, Issue 1 , 2022 , Pages 19-36 ; 10580468 (ISSN) Ahmadkhani, N ; Hosseini, M ; Saadatmand, M ; Abbaspourrad, A ; Sharif University of Technology
    Springer  2022
    Abstract
    Although medical advancements have successfully helped a lot of couples with their infertility by assisted reproductive technologies (ART), sperm selection, a crucial stage in ART, has remained challenging. Therefore, we aimed to investigate novel sperm separation methods, specifically microfluidic systems, as they do sperm selection based on sperm and/or the female reproductive tract (FRT) features without inflicting any damage to the selected sperm during the process. In this review, after an exhaustive studying of FRT features, which can implement by microfluidics devices, the focus was centered on sperm selection and investigation devices. During this study, we tried not to only point to... 

    Simulating Structure Formation in Modified Newtonian Dynamics

    , M.Sc. Thesis Sharif University of Technology Mirkamali, Maryam Sadat (Author) ; Rahvar, Sohrab (Supervisor)
    Abstract
    We simulated the structure formation in the context of Modified Newtonian Dynamics with the spherical collapse model. We supposed a spherical region with mass of galactic order, positive density contrast and uniform distribution of matter as the initial condition and investigated the evolution of its internal regions, containing different amounts of matter. We began the simulation when the region was in Newtonian regime. The overdense region, which expands with cosmic fluid in Newtonian regime, gradually enters MONDian regime and gets separated from the background due to its stronger central acceleration; then it collapses and virializes after some swings. The density distribution of the... 

    Distributed Design of Structured Optimal Controllers Using Chordal Decomposition

    , M.Sc. Thesis Sharif University of Technology Belbasi, Mohammad Reza (Author) ; Babazadeh, Maryam (Supervisor)
    Abstract
    This thesis addresses the distributed optimal control problem. In order to solve this problem a suboptimal distributed design approach has been developed using tools from graph theory and optimization theory. The first objective of this thesis is overcoming the non-scalability of distributed control problems for larges -scale systems. The second objective is using minimum information of other subsystems in the design layer. First, the problems of designing a structured controller minimizing the H_2 and H_∞ norms of the closed-loop system have been formulized and stated as semidefinite optimization problems. Then in order to use the fundamental results that links the chordal graphs and... 

    Optimal Combination Therapy of Diseases with Evolutionary Dynamics

    , M.Sc. Thesis Sharif University of Technology Akbari Sisi, Sanaz (Author) ; Babazadeh, Maryam (Supervisor)
    Abstract
    This research studied optimal combination therapy of diseases with uncertain evolutionary dynamics. The problem of neutralizing HIV virus in the host’s body was modeled as a convex optimization problem whose objective function is minimizing disturbance effect while the disease dynamics is stable in the presence of polytopic uncertainty.In the first part of this thesis, according to the characteristics of positive systems, the convexity of H2 and H∞ in the presence of polytopic uncertainty was shown. To solve the minimization problem of disturbance effect, an algorithm based on minimizing a cutting plane was used. This algorithm, with solving the minimization problem iteratively in each step... 

    Home Healthcare Planning in a Multi-Service Healthcare Network Considering Dynamic Demands and Synchronized Visits

    , M.Sc. Thesis Sharif University of Technology Bahojb Mohammadi, Mirsadra (Author) ; Radman, Maryam (Supervisor)
    Abstract
    The global rise in the elderly population, coupled with shortages in medical equipment and healthcare professionals, along with the profound impact of epidemic outbreaks like COVID-19, has underscored the critical significance of home healthcare on a global scale. Currently in Iran, some hospitals and private companies provide home healthcare services to patients. This research focuses on optimizing the scheduling and routing of nurses providing home care services to patients. In the face of daily planning challenges, which include both anticipated and uncertain emergency demands, we propose a method to efficiently allocate nursing resources. To address the unpredictability of emergency... 

    TAMER: an adaptive task allocation method for aging reduction in multi-core embedded real-time systems

    , Article Journal of Supercomputing ; 2020 Saadatmand, F. S ; Rohbani, N ; Baharvand, F ; Farbeh, H ; Sharif University of Technology
    Springer  2020
    Abstract
    Technology scaling has exacerbated the aging impact on the performance and reliability of integrated circuits. By entering into nanotechnology era in recent years, the power density per unit of area has increased, which leads to a higher chip temperature. Aging in a chip is originated from multiple phenomena; all of them are intensified by increased temperature. Several circuit- and architecture-level schemes tried to mitigate the aging in the literature. However, these schemes are not sufficient for multi-core systems due to their unawareness of the unique constraints and features of these platforms. In this paper, we propose a system-level aging mitigation method, so-called Adaptive Task...