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    Scaling behavior in measured keystroke time series from patients with Parkinson’s disease

    , Article European Physical Journal B ; Volume 93, Issue 7 , July , 2020 Madanchi, A ; Taghavi Shahri, F ; Taghavi Shahri, S. M ; Rahimi Tabar, M. R ; Sharif University of Technology
    Springer  2020
    Abstract
    Abstract: Parkinson has remained as one of the most difficult diseases to diagnose, as there are no biomarkers to be measured, and this requires one patient to do neurological and physical examinations. As Parkinson is a progressive disease, accurate detection of its symptoms is a crucial factor for therapeutic reasons. In this study, we perform Multifractal Detrended Fluctuation Analysis (MFDFA) on measured keystroke time series for three different categories of subjects: healthy, early-PD, and De-Novo patients. We have observed different scaling behavior in terms of multifractality of the measured time series, which can be used as a practical tool for diagnosis purposes. Additionally, the... 

    Genome annotation and comparative genomic analysis of Bacillus subtilis MJ01, a new bio-degradation strain isolated from oil-contaminated soil

    , Article Functional and Integrative Genomics ; Volume 18, Issue 5 , 2018 , Pages 533-543 ; 1438793X (ISSN) Rahimi, T ; Niazi, A ; Deihimi, T ; Taghavi, S. M ; Ayatollahi, S ; Ebrahimie, E ; Sharif University of Technology
    Springer Verlag  2018
    Abstract
    One of the main challenges in elimination of oil contamination from polluted environments is improvement of biodegradation by highly efficient microorganisms. Bacillus subtilis MJ01 has been evaluated as a new resource for producing biosurfactant compounds. This bacterium, which produces surfactin, is able to enhance bio-accessibility to oil hydrocarbons in contaminated soils. The genome of B. subtilis MJ01 was sequenced and assembled by PacBio RS sequencing technology. One big contig with a length of 4,108,293 bp without any gap was assembled. Genome annotation and prediction of gene showed that MJ01 genome is very similar to B. subtilis spizizenii TU-B-10 (95% similarity). The comparison... 

    Spatial and temporal study of extreme precipitation over north of Iran

    , Article Global Nest Journal ; Volume 15, Issue 3 , 2013 , Pages 305-314 ; 17907632 (ISSN) Yousefi, Y ; Mohammadi, H ; Azizi, G. H ; Taghavi, F ; Masomnia, A ; Roradeh, H ; Masoompour, J ; Sharif University of Technology
    2013
    Abstract
    Two main focus of this study is the spatial and temporal analysis of annual 24-hour extreme precipitation amounts for different return periods, and the intra-annual variability of the frequency of month to month maximum rainfall using harmonic analysis. Data for analysis gathered from 51 stations that well-scattered at north of Iran (Caspian Sea's southern region). These data are analyzed using extreme values theory and harmonic analysis techniques. The results indicate that the Gen. Extreme Value (Jenkinson solution) is more appropriate than the linear Gumbel solution for the extreme value law. The maximum expected values of 200

    Morphology and hydrogen sensing studies of the electrodeposited nanostructure palladium on porous silicon

    , Article International Journal of Nanotechnology ; Volume 6, Issue 10-11 , 2009 , Pages 892-901 ; 14757435 (ISSN) Astaraie, F. R ; Iraji zad, A ; Taghavi, N. S ; Abbaszadeh, D ; Dolati, A ; Mahshid, S. S ; Sharif University of Technology
    2009
    Abstract
    We have investigated hydrogen sensing properties of electrodeposited Pd clusters on macroporous silicon substrates. Porous layer was prepared by electrochemical etching of p-type silicon (100) wafer in organic electrolyte DMF (dimethylformamide) diluted by HF (%95 Vol. %). The deposition of Pd was carried out by linear voltammetry (LV) technique. This technique was taken for reduction of palladium ions in the potential range from 0.4 V to -1 V vs. SCE, at the scan rate of 20 mV s-1. Some samples were annealed at 300°C for an hour in air to study the effect of heat treatment on their gas sensitivity. Surface structural and chemical properties of the samples were characterised using Scanning... 

    Feasibility of imperialist competitive algorithm to predict the surface settlement induced by tunneling

    , Article Engineering with Computers ; 2018 ; 01770667 (ISSN) Tashayo, B ; Behzadafshar, K ; Soltani Tehrani, M ; Afkhami Banayem, H ; Hashemi, M. H ; Taghavi Nezhad, S. S ; Sharif University of Technology
    Springer London  2018
    Abstract
    Surface settlement is considered as an adverse effect induced by tunneling in the civil projects. This paper proposes the use of the imperialist competitive algorithm (ICA) for predicting the maximum surface settlement (MMS) resulting from the tunneling. For this work, three forms of equations, i.e., linear, quadratic and power are developed and their weights are then optimized/updated with the ICA. The requirement datasets were collected from the line No. 2 of Karaj urban railway, in Iran. In the ICA models, vertical to horizontal stress ratio, cohesion and Young’s modulus, as the effective parameters on the MSS, are adopted as the inputs. The statistical performance parameters such as root... 

    Feasibility of imperialist competitive algorithm to predict the surface settlement induced by tunneling

    , Article Engineering with Computers ; Volume 35, Issue 3 , 2019 , Pages 917-923 ; 01770667 (ISSN) Tashayo, B ; Behzadafshar, K ; Soltani Tehrani, M ; Afkhami Banayem, H ; Hashemi, M. H ; Taghavi Nezhad, S. S ; Sharif University of Technology
    Springer London  2019
    Abstract
    Surface settlement is considered as an adverse effect induced by tunneling in the civil projects. This paper proposes the use of the imperialist competitive algorithm (ICA) for predicting the maximum surface settlement (MMS) resulting from the tunneling. For this work, three forms of equations, i.e., linear, quadratic and power are developed and their weights are then optimized/updated with the ICA. The requirement datasets were collected from the line No. 2 of Karaj urban railway, in Iran. In the ICA models, vertical to horizontal stress ratio, cohesion and Young’s modulus, as the effective parameters on the MSS, are adopted as the inputs. The statistical performance parameters such as root... 

    The flowering of mechanically interlocked molecules: novel approaches to the synthesis of rotaxanes and catenanes

    , Article Coordination Chemistry Reviews ; Volume 423 , 2020 Taghavi Shahraki, B ; Maghsoudi, S ; Fatahi, Y ; Rabiee, N ; Bahadorikhalili, S ; Dinarvand, R ; Bagherzadeh, M ; Verpoort, F ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Since the emergence of mechanical bonds, considerable research efforts have been devoted to the construction of mechanically interlocked molecules (MIMs), including rotaxanes, catenanes, and molecular knots, due to their mechanically bonded components that can undergo molecular motions and create distinguishing features. They have demonstrated valuable functions in many areas of science such as polymer and materials science, nanotechnology and medicine. Furthermore, since MIMs are magnificently suited for constructing artificial molecular machines (AMMs), immense attention has currently been attracted to this area. Recent elaborate synthetic strategies accompanied by novel analytical... 

    Effects of cognitive load on the amount and temporal structure of postural sway variability in stroke survivors

    , Article Experimental Brain Research ; Volume 236, Issue 1 , 2018 , Pages 285-296 ; 00144819 (ISSN) Mehdizadeh, H ; Khalaf, K ; Ghomashchi, H ; Taghizadeh, G ; Ebrahimi, I ; Taghavi Azar Sharabiani, P ; Mousavi, S. J ; Parnianpour, M ; Sharif University of Technology
    Springer Verlag  2018
    Abstract
    This study aimed to investigate the variability in postural sway patterns during quiet standing in stroke survivors. The postural sway was measured in 19 stroke survivors, as well as 19 healthy demographically matched participants, at 3 levels of postural difficulty (rigid surface with closed and open eyes, and foam surface with closed eyes), and 3 levels of cognitive difficulty (without a cognitive task, easy and difficult cognitive tasks). Both linear analyses (the amount of postural sway variability, including the standard deviation of the COP velocity in both the anteroposterior (AP) and mediolateral (ML) directions), as well as non-linear analyses [the temporal structure of the COP... 

    Water resources dynamics: Chabahar free-zone case study

    , Article 10th Annual International IEOM Conference, IEOM 2020, 10 March 2020 through 12 March 2020 ; Volume 0, Issue March , 2020 , Pages 739-751 Taghavi, A ; Sadeghi, A. H ; Zare, H ; Khaleghparast, S ; BINGHAMTON UNIVERSITY; EATON Powering Business worldwide; Emirates; SIEMENS; UNIVERSITY of DERBY ; Sharif University of Technology
    IEOM Society  2020
    Abstract
    The proper design of the urban infrastructure is crucial to develop civilization in a developing area. While there are dozens of managerial suggestions to go along with the static aspects of components in urban infrastructure design, hardly any piece of advice may be found to ensure dynamic outcomes of the whole design in advance. In this paper, a novel system dynamics model is introduced and applied in this context as a contribution to fill the research gap. The modular nature of the model development helps to alleviate the challenge of simultaneous design of components and system, with the potential capability of both static and dynamic verification. It allows the decision aider to observe... 

    Improvement of upper limb motor control and function after competitive and noncompetitive volleyball exercises in chronic stroke survivors: a randomized clinical trial

    , Article Archives of Physical Medicine and Rehabilitation ; Volume 100, Issue 3 , 2019 , Pages 401-411 ; 00039993 (ISSN) Mandehgary Najafabadi, M ; Azad, A ; Mehdizadeh, H ; Behzadipour, S ; Fakhar, M ; Taghavi Azar Sharabiani, P ; Parnianpour, M ; Taghizadeh, G ; Khalaf, K ; Sharif University of Technology
    W.B. Saunders  2019
    Abstract
    Objectives: To investigate the effects of competitive and noncompetitive volleyball exercises on the functional performance and motor control of the upper limbs in chronic stroke survivors. Design: Randomized clinical trial. Setting: Outpatient rehabilitation center. Participants: Chronic stroke survivors (N=48). Interventions: Participants were randomly assigned to competitive (n=16) or noncompetitive (n=16) volleyball exercise groups (60min/d volleyball exercise+30min/d traditional rehabilitation, 3d/wk for 7wk) and control group (n=16). Main Outcome Measures: Reach and grasp motor control measures were evaluated through kinematic analysis. Functional outcomes were assessed via Motor... 

    Is really NACK protocol secure to be employed in MANETs?

    , Article Proceedings - 17th IEEE International Conference on Computational Science and Engineering, CSE 2014, Jointly with 13th IEEE International Conference on Ubiquitous Computing and Communications, IUCC 2014, 13th International Symposium on Pervasive Systems, Algorithms, and Networks, I-SPAN 2014 and 8th International Conference on Frontier of Computer Science and Technology, FCST 2014, 19 December 2014 through 21 December 2014 ; 2015 , Pages 1644-1647 ; 9781479979813 (ISBN) Saeed, M ; Mackvandi, A ; Taghavi, M ; Zare Bidoki, M ; Ghasemi, M ; Neshati, A ; Liu, X ; El Baz, D ; Kang, K ; Hsu, C. H ; Chen, W ; Sharif University of Technology
    Institute of Electrical and Electronics Engineers Inc  2015
    Abstract
    MANET, which stands for Mobile Ad-hoc Network, is composed of a group of self-organized and wireless nodes that do not possess any predictable and fixed infrastructure. When nodes want to communicate with each other, they have to pass on their messages directly or indirectly. In case the destination node is out of the transmission range, the source node has to rely on intermediate nodes, which, in this case, is called indirect transmission. On the other hand, if the destination node is the neighboring node, there is no need to employ intermediate nodes, which, in this case, is called direct transmission. Over the past years, security issues in MANETs have received a great deal of attention... 

    Molecular interaction of fibrinogen with zeolite nanoparticles

    , Article Scientific Reports ; Volume 9, Issue 1 , 2019 ; 20452322 (ISSN) Derakhshankhah, H ; Hosseini, A ; Taghavi, F ; Jafari, S ; Lotfabadi, A ; Ejtehadi, M. R ; Shahbazi, S ; Fattahi, A ; Ghasemi, A ; Barzegari, E ; Evini, M ; Saboury, A. A ; Shahri, S. M. K ; Ghaemi, B ; Ng, E. P ; Awala, H ; Omrani, F ; Nabipour, I ; Raoufi, M ; Dinarvand, R ; shahpasand, K ; Mintova, S ; Hajipour, M. J ; Mahmoudi, M ; Sharif University of Technology
    Nature Publishing Group  2019
    Abstract
    Fibrinogen is one of the key proteins that participate in the protein corona composition of many types of nanoparticles (NPs), and its conformational changes are crucial for activation of immune systems. Recently, we demonstrated that the fibrinogen highly contributed in the protein corona composition at the surface of zeolite nanoparticles. Therefore, understanding the interaction of fibrinogen with zeolite nanoparticles in more details could shed light of their safe applications in medicine. Thus, we probed the molecular interactions between fibrinogen and zeolite nanoparticles using both experimental and simulation approaches. The results indicated that fibrinogen has a strong and...