Sharif Digital Repository

Single-cell RNA sequencing (scRNA-seq) technologies have empowered us to study gene expressions at the single-cell resolution. These technologies are developed based on barcoding of single cells and sequencing of transcriptome using next-generation sequencing technologies. Achieving this single-cell resolution is specially important when the target population is complex or heterogeneous, which is the case for most biological samples, including tissue samples and tumor biopsies.Single-cell technologies suffer from high amounts of noise and missing values, generally known as dropouts. This complexity can affect a number of key downstream analyses such as differential expression analysis,... 

The gamma cameras, based on scintillation crystal followed by an array of photomultiplier tubes (PMTs), play a crucial role in nuclear medicine. The use of square PMTs provides the minimum dead zones in the camera. The camera with squared PMTs also reduces the number of PMTs relative to the detection area.In this thesis, we introduced a new read-out method whereby the total cost of the read-out board will be decreased by a factor of 2.4; in return, the energy and spatial resolution of the system will be reduced by 0.3% and 0.4% respectively. We also implemented a positioning module in the FPGA chip via that the transmission rate between FPGA and the computer will be tripled, and the... 

The structural integrity of the sealing material is critical for the reliability of solid oxide fuel/electrolysis stacks. In this study, the mechanical properties of a rapid crystallizing glass of BaO-CaO-SiO2 system were evaluated. The crystallization as a determining factor in the mechanical behavior of the glass-ceramic sealant was investigated via high-temperature X-Ray diffraction spectrometer. Three- and four-point bending tests were carried out to measure the flexural strength (σ) of sealant material bars and head-to-head joined specimens at room- and high-temperatures. In addition, the elastic modulus (E) was measured by impulse excitation test up to 900 ºC. Also, the indentation... 

Nowadays, different processes are designed in order to convert raw materials to value added products. One of these is the Bentonite sulfur production process. The most important equipment in this process are stirred tanks where mixing operation of molten sulfur with some additives such as functionalized Bentonite and oxides of iron, zinc and manganese are performed.
In this thesis, following the design and making of a laboratory scale glass baffled stirred tank, the viscosity of molten sulfur and additive suspension has been measured at different temperature (125, 130 and 135oC) and several formulations. Concentration profile of Bentonite has also been obtained by means of local sampling... 

PMMA bone cement lacks biodegradability and the ability to bond with surrounding bone tissue. Therefore, the development of a new generation of bioactive bone cements that are biodegradable and possess adequate mechanical properties as well as desirable setting time is receiving remarkable interest.In this study, we have developed novel mineral-based bioactive bone cements. Our mineral bioactive bone cements were composed of Calcium Sulfate Hemihydrate, Bioactive Glass, and Tricalcium Silicate. Firstly, a binary system composed of Calcium Sulfate Hemihydrate and Bioactive Glass was optimized based on mechanical and setting behavior. Secondly, Tricalcium Silicate was added to the powder phase... 

Various studies have confirmed that water salinity and its composition significantly affect the efficiency of the waterflooding process. Field-scale operation of low-salinity water injection has been proven to be a cost-effective enhanced oil recovery (EOR) method which is also compatible with the environmental regulations. Although this method has satisfactory results, it faces some challenges, such as in-situ mixing of the injection low-salinity water with the saline water in the host reservoir. The salinity of the injected water increases, as it contacts the high-salinity reservoir brine in the pores. This phenomenon significantly impairs the efficiency of this technique, and increases...