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    Investigation and Development of an Interpretable Machine Learning Model in Therapeutic Applications by Providing Solutions to Change the Condition of Patients

    , M.Sc. Thesis Sharif University of Technology Damandeh, Moloud (Author) ; Haji, Alireza (Supervisor)
    Abstract
    Despite the significant progress of machine learning models in the health domain, current advanced methods usually produce non-transparent and black-box models, and for this reason, they are not widely used in medical decision-making. To address the issue of non-transparency in black-box models, interpretable machine learning models have been developed. In the health domain, counterfactual scenarios can provide personalized explanations for predictions and suggest necessary changes to transition from an undesirable outcome class to a desirable one for physicians. The aim of this study is to present an interpretable machine learning framework in the health domain that, in addition to having... 

    Diagnosis of coronary artery disease using data mining techniques based on symptoms and ECG features

    , Article European Journal of Scientific Research ; Volume 82, Issue 4 , Aug , 2012 , Pages 542-553 ; 1450216X (ISSN) Alizadehsani, R ; Habibi, J ; Hosseini, M. J ; Boghrati, R ; Ghandeharioun, A ; Bahadorian, B ; Sani, Z. A ; Sharif University of Technology
    EuroJournals, Inc  2012
    Abstract
    The most common heart disease is Coronary artery disease (CAD). CAD is one of the main causes of heart attacks and deaths across the globe. Early diagnosis of this disease is therefore, of great importance. A large number of methods have thus far been devised for diagnosing CAD. Most of these techniques have been conducted on the basis of the Irvine dataset (University of California), which not only has a limited number of features but is also full of missing values and thus lacks reliability. The present study was designed to seek a new set, free from missing values, comprising features such as the functional class, dyspnea, Q wave, ST elevation, ST depression, and T inversion. Information... 

    Nanotechnology in diagnosis and treatment of coronary artery disease

    , Article Nanomedicine ; Volume 11, Issue 5 , 2016 , Pages 513-530 ; 17435889 (ISSN) Karimi, M ; Zare, H ; Bakhshian Nik, A ; Yazdani, N ; Hamrang, M ; Mohamed, E ; Sahandi Zangabad, P ; Moosavi Basri, S. M ; Bakhtiari, L ; Hamblin, M. R ; Sharif University of Technology
    Future Medicine Ltd 
    Abstract
    Nanotechnology could provide a new complementary approach to treat coronary artery disease (CAD) which is now one of the biggest killers in the Western world. The course of events, which leads to atherosclerosis and CAD, involves many biological factors and cellular disease processes which may be mitigated by therapeutic methods enhanced by nanotechnology. Nanoparticles can provide a variety of delivery systems for cargoes such as drugs and genes that can address many problems within the arteries. In order to improve the performance of current stents, nanotechnology provides different nanomaterial coatings, in addition to controlled-release nanocarriers, to prevent in-stent restenosis.... 

    Primary stenosis progression versus secondary stenosis formation in the left coronary bifurcation: a mechanical point of view

    , Article Biocybernetics and Biomedical Engineering ; Volume 39, Issue 1 , 2019 , Pages 188-198 ; 02085216 (ISSN) Jahromi, R ; Pakravan, H. A ; Saidi, M. S ; Firoozabadi, B ; Sharif University of Technology
    Elsevier Sp. z o.o  2019
    Abstract
    Biomechanical forces and hemodynamic factors influence the blood flow and the endothelial cells (ECs) morphology. These factors behave differently beyond the coronary artery stenosis. In the present study, unsteady blood flow in the left coronary artery (LCA) and its atherosclerotic bifurcating vessels, left anterior descending (LAD) and left circumflex (LCX) arteries, were numerically simulated to investigate the risk of plaque length development and secondary plaque formation in the post-stenotic areas. Using fluid–structure interaction (FSI) model, compliance of arterial wall and vessel curvature variations due to cardiac motion were considered. The arteries included plaques at the... 

    Primary stenosis progression versus secondary stenosis formation in the left coronary bifurcation: a mechanical point of view

    , Article Biocybernetics and Biomedical Engineering ; Volume 39, Issue 1 , 2019 , Pages 188-198 ; 02085216 (ISSN) Jahromi, R ; Pakravan, H. A ; Saidi, M. S ; Firoozabadi, B ; Sharif University of Technology
    Elsevier Sp. z o.o  2019
    Abstract
    Biomechanical forces and hemodynamic factors influence the blood flow and the endothelial cells (ECs) morphology. These factors behave differently beyond the coronary artery stenosis. In the present study, unsteady blood flow in the left coronary artery (LCA) and its atherosclerotic bifurcating vessels, left anterior descending (LAD) and left circumflex (LCX) arteries, were numerically simulated to investigate the risk of plaque length development and secondary plaque formation in the post-stenotic areas. Using fluid–structure interaction (FSI) model, compliance of arterial wall and vessel curvature variations due to cardiac motion were considered. The arteries included plaques at the... 

    High precision invasive FFR, low-cost invasive iFR, or non-invasive CFR?: optimum assessment of coronary artery stenosis based on the patient-specific computational models

    , Article International Journal for Numerical Methods in Biomedical Engineering ; Volume 36, Issue 10 , 2020 Tajeddini, F ; Nikmaneshi, M. R ; Firoozabadi, B ; Pakravan, H. A ; Ahmadi Tafti, S. H ; Afshin, H ; Sharif University of Technology
    Wiley-Blackwell  2020
    Abstract
    The objective of this paper is to apply computational fluid dynamic (CFD) as a complementary tool for clinical tests to not only predict the present and future status of left coronary artery stenosis but also to evaluate some clinical hypotheses. In order to assess the present status of the coronary artery stenosis severity, and thereby selecting the most appropriate type of treatment for each patient, fractional flow reserve (FFR), instantaneous wave free-ratio (iFR), and coronary flow reserve (CFR) are calculated. To examine FFR, iFR, and CFR results, the effect of geometric features of stenoses, including diameter reduction (%), lesion length (LL), and minimum lumen diameter (MLD), is... 

    Prediction of Coronary Angiography Results by Flow Mediated Dilation Assessments with Photoplethysmography

    , M.Sc. Thesis Sharif University of Technology Hosseini, Zahra Sadat (Author) ; Zahedi, Edmond (Supervisor) ; Fakhrzadeh, Hossein (Supervisor)
    Abstract
    Cardio Vascular Diseases (CVD) is currently the most important cause of mortality in the world. Coronary artery disease (CAD-with 3 major epicardial vessels) is one of the significant CVD. Coronary angiography remains the gold standard for identifying the presence and absence of stenosis due to CAD. It is performed by inserting a catheter into the coronary artery, directly injecting radiopaque contrast material there and recording radiographic images in different view of arteries. Images of this invasive way show severity and area of stenosis.
    A sign of CAD is endothelial dysfunction (inner artery layer) in peripheral arteries like the brachial artery. Due to a significant correlation... 

    A minimally invasive robotic surgery approach to perform totally endoscopic coronary artery bypass on beating hearts

    , Article Medical Hypotheses ; Volume 124 , 2019 , Pages 76-83 ; 03069877 (ISSN) Alamdar, A ; Hanife, S ; Farahmand, F ; Behzadipour, S ; Mirbagheri, A ; Sharif University of Technology
    Churchill Livingstone  2019
    Abstract
    The currently available robotic systems rely on rigid heart stabilizers to perform totally endoscopic coronary artery bypass (TECAB) surgery on beating hearts. Although such stabilizers facilitate the anastomosis procedure by immobilizing the heart and holding the surgery site steady, they can cause damage to the heart tissue and rupture of the capillary vessels, due to applying relatively large pressures on the epicardium. In this paper, we propose an advanced robotic approach to perform TECAB on a beating heart with minimal invasiveness. The idea comes from the fact that the main pulsations of the heart occur as excursions in normal direction, i.e., perpendicular to the heart surface. We... 

    Computational investigation of stenosis in curvature of coronary artery within both dynamic and static models

    , Article Computer Methods and Programs in Biomedicine ; Volume 185 , 2020 Biglarian, M ; Momeni Larimi, M ; Hassanzadeh Afrouzi, H ; Moshfegh, A ; Toghraie, D ; Javadzadegan, A ; Rostami, S ; Sharif University of Technology
    Elsevier Ireland Ltd  2020
    Abstract
    Background and Objective: Blood flow variation during cardiac cycle is the main mechanism of atherosclerotic development which is dependent on. Methods: The present work mainly tends to investigate stenosis effect in dynamic curvature of coronary artery. This paper presents numerical investigations on wall shear stress profiles in three-dimensional pulsatile flow through curved stenotic coronary arteries for both static and dynamic model. In order to do so, three-dimensional models related to the curved arteries with two degrees of stenosis (30% and 50%). Results: Lower amount of wall shear stress is found near the inner wall of artery distal to the plaque region (stenosis) and in both... 

    Rapamycin Loaded Chitosan Nanopartilces to Cure Coronary Artery Blockage: Synthetize And Characterization

    , M.Sc. Thesis Sharif University of Technology Manafi Rad, Arash (Author) ; Simchi, Abdolreza (Supervisor) ; Shokrgozar, Mohammad Ali (Supervisor)
    Abstract
    Coronary artery diseaseaffects millions of persons and isone of the leading causes of morbidity and mortality worldwide. Invasive techniques such as coronary artery bypassgrafting are used to alleviate the lesion of arterial occlusion.Unfortunately, restenosis or occlusion of the graftedconduit occurs over a time frame of months to years with a gradual reduction in patency, especially in vein grafts. Theevents leading to intimal hyperplasia (IH) formation involve numerous cellular and molecular components. Variouscellular elements of the vessel wall are involved as are leucocyte–endothelial interactions that trigger the coagulationcascade leading to localized thrombus formation. Subsequent... 

    Constitutive Modeling and Numerical Simulation of Coronary Arteries Mechanical Behavior in Stenting and Succeeding Growth

    , Ph.D. Dissertation Sharif University of Technology Fereidoonnezhad, Behrooz (Author) ; Naghdabadi, Reza (Supervisor) ; Sohrabpour, Saeed (Supervisor)
    Abstract
    Cardiovascular diseases are the major cause of death worldwide. Atherosclerosis is one of the major types of cardiovascular diseases in which fibrous and fatty materials, called plaque, build up inside the artery and cause partial or total occlusion of the artery. Intravascular balloon angioplasty with or without stenting is the most common treatment of this disease. In 2010, approximately 954000 stent implantations were performed in the United States. The major issue associated with stenting is reclosure or renarrowing of the transverse section of the artery termed in-stent restenosis (ISR). Unfortunately, nearly one–third of the patients
    who receive stent implantation require further... 

    Numerical and One Dimensional Modeling of Cardiovascular System Along with Lumped Parameter Modeling of the Heart

    , M.Sc. Thesis Sharif University of Technology Salehi, Sarah (Author) ; Firoozabadi, Bahar (Supervisor) ; Saidi, Mohammad Saeed (Co-Advisor)
    Abstract
    Cardiovascular diseases are major causes of morbidity and mortality in the world. In order to prevent or reduce these diseases, engineers and scientists are concerned to find solutions. In this way, it is important to know about the blood flow and its changes in various diseases. By using simulation methods, diagnosis can be very easier. In this study, a system of arterial tree consisting of 93 systemic arteries along with 7 pulmonary arteries is considered. In other words, this model contains 100 systemic and pulmonary arteries that encompass central and peripheral arteries. Other parts of this model are cerebral vasculature and coronary arteries. Cerebral arteries, also called circle of... 

    Modeling of Blood Flow and Deposition of Low Density Lipoprotein (LDL) in Coronary Arteries

    , M.Sc. Thesis Sharif University of Technology Emami Meybodi, Ali (Author) ; Firoozabadi, Bahar (Supervisor) ; Saidi, Mohammad Said (Co-Advisor)
    Abstract
    In this thesis, hemodynamic parameters of flow and deposition of low density lipoproteins (LDL) on wall of coronary arteries with taking into account their curvature on the heart are studied. At first, numerical solution of the blood flow by assumption of blood as incompressible and Newtonian fluid for steady and pulsatile inlet is done. Then by assuming LDL particles as dilute solute in the blood, LDL transport from artery lumen into arterial wall is studied. LDL accumulation and penetration into the vessel wall cause thickening of the walls and eventually eclipse it and its known as the first stage of atherosclerosis disease. The results show that low shear region occurs on inner wall... 

    The Effect of Heart Dynamic Motion on LDL Concentration in Coronary Arteries

    , M.Sc. Thesis Sharif University of Technology Seyed Hossein, Saeed (Author) ; Dehghan Firoozabadi, Bahar (Supervisor)
    Abstract
    Heart attack is considered as one of the most common reasons of morality all over the world. Coronary Atherosclerosis is known as the major causes of heart attack. The commence and proceed of this disease is related to cross of Low Density Lipoprotein. In this project, based on numerical simulation using ANSYS Fluent, hemodynamic variables and the rate of LDL particles penetration to porous wall of coronary artery is investgated. The geometry is the first bifurcation of Left Anterior Descending and is located on the supposed sphere that represents heart configuration. Sinsuidal variations of shere radii, simulates pulsating movement of heart. Heart diameter is supposed to remain constant... 

    Determination of the Degree of Occlusion of Coronary Arteries by Processing Angiography Images

    , M.Sc. Thesis Sharif University of Technology Ghalehnovi, Mahboobeh (Author) ; Zahedi, Edmond (Supervisor) ; Fatemizade, Emadeddin (Supervisor)
    Abstract
    Cardiovascular disease is considered as the most important cause of death in the world. The coronary vessels, with three main arteries, has quite important. Coronary angiography is still the most common modality for physicians to assess the severity of vessel narrowing or stenosis during percutaneous coronary intervention procedure. For this procedure, a thin, flexible tube called a catheter is put into a blood vessel in your arm, groin (upper thigh), or neck. The tube is threaded into your coronary arteries, and the dye is released into your bloodstream. X-ray pictures are taken while the dye is flowing through the coronary arteries. Physicians evaluate angiographic images visually with... 

    Modeling Flow and Fat Particle Deposition in Coronary Arteries

    , M.Sc. Thesis Sharif University of Technology Biglarian, Mohit (Author) ; Firoozabadi, Bahar (Supervisor) ; Saeedi, Mohammad Saeed (Co-Advisor)
    Abstract
    In this thesis, flow hemodynamic parameters and white blood cell deposition on the 3- D of coronary artries of heart coronary walls are studied. At first, numerical simulation of blood flow and without the presence of white cells is performed. Then, using the Lagrangian approach, white blood cells as solid particles are tracked considering forces such as drag force, weight, buoyancy, Saffman lift force, virtual mass in one way coupling method. this particle representive of white blood cells and play significant role in low density lipoprotein (LDL) deposition.The results show that a low shear region occurs on myocardial wall. maximum flow velocity near the bifurcation towards epicardial wall... 

    Simulation of NO Production Process from Endothelial Cells and its Effect on Coronary Artery Flow Field

    , M.Sc. Thesis Sharif University of Technology Shahriari, Amir Hossein (Author) ; Firoozabadi, Bahar (Supervisor)
    Abstract
    Endothelial derived nitric oxide (NO) and its role in regulating the physiological conditions of blood vessels is one of the favorite topics among researchers. The majority of previous studies have focused on nitric oxide transport in blood vessels, less attention has been paid to its vasodilative effects in blood vessels. The main aim of this study is to propose an integrated model to study the effects of endothelial-derived nitric oxide on hemodynamic conditions of blood vessels. Nitric oxide is produced by endothelial cells upon exposure to mechanical forces such as hemodynamic shear stress. The synthesized nitric oxide then diffuses into the neighboring vascular smooth cells, where it... 

    Atheroprone sites of coronary artery bifurcation: Effect of heart motion on hemodynamics-dependent monocytes deposition

    , Article Computers in Biology and Medicine ; Volume 133 , 2021 ; 00104825 (ISSN) Biglarian, M ; Firoozabadi, B ; Saidi, M. S ; Sharif University of Technology
    Elsevier Ltd  2021
    Abstract
    Atherosclerosis as a common cardiovascular disease is a result of both adverse hemodynamics conditions and monocyte deposition within coronary arteries. It is known that the adhesion of monocytes on the arterial wall and their interaction with the vascular surface are one of the main parameters in the initiation and progression of atherosclerosis. In this work, hemodynamic parameters and monocyte deposition have been investigated in a 3D computational model of the Left Anterior Descending coronary artery (LAD) and its first diagonal branch (D1) under the heart motion. A one-way Lagrangian approach is performed to trace the monocyte particles under different blood flow regimes and heart motion... 

    Design and Fabrication of Engineered Biomaterials for Tissue Engineering Applications such as Cardiovascular System

    , M.Sc. Thesis Sharif University of Technology Khayat Norouzi, Sara (Author) ; Shamlou, Amir (Supervisor)
    Abstract
    Cardiovascular diseases are the leading cause of death all over the world, even more common than cancers. The first reason of mortality in Iran according to statistics is the occlusion of coronary arteries. Unfortunately almost one third of patients doesn’t have enough blood vessels to be used in the bypass surgery and need artificial vessels. These artificial blood vessels with small diameters (less than 6 mm) will fail quickly. As a result there is an increasing demand for tissue engineered blood vessels which are capable of enduring high blood pressures. An artificial blood vessel should mimic both structure and mechanical properties of the real one. Blood vessels have layered structures,... 

    Simulation of Competitive Flow in the Coronary Arteries Bypass

    , M.Sc. Thesis Sharif University of Technology Azimi Nejad, Milad (Author) ; Firoozabadi, Bahar (Supervisor)
    Abstract
    Atherosclerosis is one of the most important factors for mortality and morbidity in the world. Coronary artery bypass graft (CABG) is applied for treatment of this disease which in this surgery, the patient vessels, such as internal thoracic artery and saphenous vein, are harvested and grafted to the coronary arteries. The graft success and its performance in short and long-term are depended on the much factors e.g. the severity of stenosis in the coronary artery. It should be noted that the low level of stenosis in the coronary artery causes the creation of undesirable phenomenon of competitive flow in the grafts after the surgery which this phenomenon has been reported as a cause of graft...