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    Expression analysis of Wnt signaling pathway related lncRNAs in periodontitis: A pilot case-control study

    , Article Human Gene ; Volume 33 , 2022 ; 27730441 (ISSN) Ghafouri-Fard, S ; Dashti, S ; Gholami, L ; Badrlou, E ; Sadeghpour, S ; Hussen, B. M ; Hidayat, H. J ; Nazer, N ; Shadnoush, M ; Sayad, A ; Arefian, N ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    LncRNAs are involved in the modulation of several signaling pathways which have a crucial effect in the differentiation of periodontal ligament cells and the induction of cementum regeneration. Autophagy and Wnt signaling are two important pathways with a wide range of interrelationships associated with periodontitis. We chose four lncRNAs based on their potential interaction with these two pathways. We examined the expression of FOXD2-AS1, NNT-AS1, GAS8-AS1, and CCAT1 lncRNAs in tissues and blood specimens of patients with periodontitis and unaffected controls using qRT-PCR. Expression amounts of FOXD2-AS1 were lower in blood of cases compared with controls (relative expression (RE) = 0.08,... 

    Apathy exacerbates postural control impairments in stroke survivors: The potential effects of cognitive dual-task for improving postural control

    , Article Neuropsychologia ; Volume 174 , 2022 ; 00283932 (ISSN) Dehmiyani, A ; Mehdizadeh, H ; Azad, A ; Cheraghifard, M ; Jamali, S ; Davoudi, M ; Shokouhyan, S. M ; Taghizadeh, G ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    Apathy is a stressor and debilitating common condition for both stroke survivors and their caregivers. However, its effects on the postural control of these patients have not yet been investigated. Improved postural stability through withdrawing attention from postural control by concurrent cognitive task (i.e. dual-task condition) has been reported previously, but the effect of apathy, as a confounding factor, remains unknown. This study aimed to examine the effects of apathy and dual-task condition on postural control of chronic stroke survivors from biomechanical and neurophysiological perspectives. Twenty non-apathetic stroke survivors, 20 apathetic stroke survivors, and 20 sex-, age-,... 

    Role of Thigh Muscle Changes in Knee Osteoarthritis Outcomes: Osteoarthritis Initiative Data

    , Article Radiology ; Volume 305, Issue 1 , 2022 , Pages 169-178 ; 00338419 (ISSN) Mohajer, B ; Dolatshahi, M ; Moradi, K ; Najafzadeh, N ; Eng, J ; Zikria, B ; Wan, M ; Cao, X ; Roemer, F. W ; Guermazi, A ; Demehri, S ; Sharif University of Technology
    Radiological Society of North America Inc  2022
    Abstract
    Background: Longitudinal data on the association of quantitative thigh muscle MRI markers with knee osteoarthritis (KOA) outcomes are scarce. These associations are of clinical importance, with potential use for thigh muscle–directed disease-modifying interventions. Purpose: To measure KOA-associated longitudinal changes in MRI-derived muscle cross-sectional area (CSA) and adipose tissue and their association with downstream symptom worsening and knee replacement (KR). Materials and Methods: In a secondary analysis of the Osteoarthritis Initiative multicenter prospective cohort (February 2004 through October 2015), knees of participants with available good-quality thigh MRI scans at baseline... 

    The effects of supervised and non-supervised upper limb virtual reality exercises on upper limb sensory-motor functions in patients with idiopathic Parkinson's disease

    , Article Human Movement Science ; Volume 85 , 2022 ; 01679457 (ISSN) Hashemi, Y ; Taghizadeh, G ; Azad, A ; Behzadipour, S ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    Background: Impairments of upper limb (UL) sensory-motor functions are common in Parkinson's disease (PD). Virtual reality exercises may improve sensory-motor functions in a safe environment and can be used in tele-rehabilitation. This study aimed to investigate the effects of supervised and non-supervised UL virtual reality exercises (ULVRE) on UL sensory-motor functions in patients with idiopathic PD. Methods: In this clinical trial study, 45 patients with idiopathic PD (29 male) by mean ± SD age of 58.64 ± 8.69 years were randomly allocated to either the control group (conventional rehabilitation exercises), supervised ULVRE or non-supervised ULVRE. Interventions were 24 sessions, 3... 

    Effects of COVID-19-related psychological distress and anxiety on quality of sleep and life in healthcare workers in Iran and three European countries

    , Article Frontiers in Public Health ; Volume 10 , 2022 ; 22962565 (ISSN) Zangeneh Soroush, M ; Tahvilian, P ; Koohestani, S ; Maghooli, K ; Jafarnia Dabanloo, N ; Sarhangi Kadijani, M ; Jahantigh, S ; Zangeneh Soroush, M ; Saliani, A ; Sharif University of Technology
    Frontiers Media S.A  2022
    Abstract
    Introduction: The COVID-19 pandemic has considerably affected human beings most of whom are healthcare workers (HCWs) combating the disease in the front line. Methods: This cross-sectional study aims to explore the effects of stress and anxiety caused by COVID-19 on the quality of sleep and life in HCWs, including physicians, nurses, and other healthcare staff. In this global study, we asked 1,210 HCWs (620 and 590 volunteers from Iran and European countries, including Germany, the Netherlands, and Italy, respectively), who age 21–70, to participate in the test. Several measures of COVID-related stress, anxiety, sleep, and life quality, including the 12-item General Health Questionnaire... 

    Fullerene C60 nanoparticle attenuates pain and tumor necrosis factor-α protein expression in the hippocampus following diabetic neuropathy in rats

    , Article Physiology and Pharmacology (Iran) ; Volume 26, Issue 4 , 2022 , Pages 451-458 ; 24765236 (ISSN) Namdar, F ; Bahrami, F ; Bahari, Z ; Ghanbari, B ; Shahyad, S ; Mohammadi, M. T ; Sharif University of Technology
    Iranian Society of Physiology and Pharmacology  2022
    Abstract
    Introduction: Diabetic neuropathy is a common complication of diabetes mellitus. It is associated with nerve damage due to oxidative stress and high levels of pro-inflammatory mediators. In the present study, we examined the anti-nociceptive effects of Fullerene nanoparticle, as a potent anti-oxidant, during diabetic neuropathy. Methods: Diabetes mellitus induced through injection of streptozotocin (STZ) (40 mg/kg). Four groups were used in the study as follows: the control, control+fullerene, diabetes, and diabetes +fullerene groups. All four groups received sesame oil. Treatment rats received fullerene C60 (1mg/kg/day) for 9 weeks by intra-gastric gavage. Then, cold allodynia, histology,... 

    Clinical validation of a smartphone-based handheld ECG device: A validation study

    , Article Critical Pathways in Cardiology ; Volume 21, Issue 4 , 2022 , Pages 165-171 ; 1535282X (ISSN) Ahmadi-Renani, S ; Gharebaghi, M ; Kamalian, E ; Hajghassem, H ; Ghanbari, A ; Karimi, A ; Mansoury, B ; Dayari, M. S ; Khatmi Nemati, M ; Karimi, A ; Zarghami, M. H ; Vasheghani Farahani, A ; Sharif University of Technology
    Lippincott Williams and Wilkins  2022
    Abstract
    Background: Remote cardiac monitoring and screening have already become an integral telemedicine component. The wide usage of several different wireless electrocardiography (ECG) devices warrants a validation study on their accuracy and reliability. Methods: Totally, 300 inpatients with the Nabz Hooshmand-1 handheld ECG device and the GE MAC 1200 ECG system (as the reference) were studied to check the accuracy of the devices in 1 and 6-limb lead performance. Simultaneous 10-second resting ECGs were assessed for the most common ECG parameters in lead I. Afterward, 6-lead ECGs (limb leads), were performed immediately and studied for their morphologies. Results: Of the 300 patients, 297 had... 

    A large dataset of white blood cells containing cell locations and types, along with segmented nuclei and cytoplasm

    , Article Scientific Reports ; Volume 12, Issue 1 , 2022 ; 20452322 (ISSN) Kouzehkanan, Z. M ; Saghari, S ; Tavakoli, S ; Rostami, P ; Abaszadeh, M ; Mirzadeh, F ; Satlsar, E. S ; Gheidishahran, M ; Gorgi, F ; Mohammadi, S ; Hosseini, R ; Sharif University of Technology
    Nature Research  2022
    Abstract
    Accurate and early detection of anomalies in peripheral white blood cells plays a crucial role in the evaluation of well-being in individuals and the diagnosis and prognosis of hematologic diseases. For example, some blood disorders and immune system-related diseases are diagnosed by the differential count of white blood cells, which is one of the common laboratory tests. Data is one of the most important ingredients in the development and testing of many commercial and successful automatic or semi-automatic systems. To this end, this study introduces a free access dataset of normal peripheral white blood cells called Raabin-WBC containing about 40,000 images of white blood cells and color... 

    Bone density may affect primary stability of anterior cruciate ligament reconstruction when organic core bone plug fixation technique used

    , Article Journal of Experimental Orthopaedics ; Volume 9, Issue 1 , 2022 ; 21971153 (ISSN) Dehestani, P ; Farahmand, F ; Borjali, A ; Bashti, K ; Chizari, M ; Sharif University of Technology
    Springer Science and Business Media Deutschland GmbH  2022
    Abstract
    Purpose: Core Bone Plug Fixation (CBPF) technique is an implant-less methodology for ACL reconstruction. This study investigates the effect of bone density on CBPF stability to identify the bone quality that is likely to benefit from this technique. Methods: Artificial blocks with 160 (Group 1), 240 (Group 2), and 320 (Group 3) kg/m3 densities were used to simulate human bone with diverse qualities. These groups are representative of the elderly, middle age and young people, respectively. A tunnel was made in each test sample using a cannulated drill bit which enabled harvesting the core bone plug intact. Fresh animal tendon grafts were prepared and passed through the tunnel, so the core... 

    Dopamine receptors gene expression pattern and locomotor improvement differ between female and male zebrafish during spinal cord auto repair

    , Article Zebrafish ; Volume 19, Issue 4 , 2022 , Pages 137-147 ; 15458547 (ISSN) Hosseini, P ; Mirsadeghi, S ; Rahmani, S ; Izadi, A ; Rezaei, M ; Ghodsi, Z ; Rahimi Movaghar, V ; Kiani, S ; Sharif University of Technology
    Mary Ann Liebert Inc  2022
    Abstract
    The dopaminergic system, a spinal cord (SC) motor circuit regulator, is administrated by sexual hormones and evolutionary conserved in all vertebrates. Accordingly, we hypothesized that the dopamine receptor (DAR) expression pattern may be dissimilar in female and male zebrafish SC auto repair. We implemented an uncomplicated method to induce spinal cord injury (SCI) on fully reproductive adult zebrafish, in both genders. SCI was induced using a 28-gauge needle at 9th-10th vertebra without skin incision. Thereupon, lesioned SC was harvested for DAR gene expression analysis; zebrafish were tracked routinely for any improvement in swim distance, speed, and their roaming... 

    The validity and inter-rater reliability of a video-based posture-matching tool to estimate cumulative loads on the lower back

    , Article Journal of Biomedical Physics and Engineering ; Volume 12, Issue 4 , 2022 , Pages 417-430 ; 22517200 (ISSN) Ghaneh Ezabadi, S ; Abdoli Eramaki, M ; Arjmand, N ; Abouhossein, A ; Zakerian, S. A ; Sharif University of Technology
    Shriaz University of Medical Sciences  2022
    Abstract
    Background: Low back pain (LBP) is known as one of the most common workrelated musculoskeletal disorders. Spinal cumulative loads (CLs) during manual material handling (MMH) tasks are the main risk factors for LBP. However, there is no valid and reliable quantitative lifting analysis tool available for quantifying CLs among Iranian workers performing MMH tasks. Objective: This study aimed to investigate the validity and inter-rater reliability of a posture-matching load assessment tool (PLAT) for estimating the L5-S1 static cumulative compression (CC) and shear (CS) loads based on predictive regression equations. Material and Methods: This experimental study was conducted among six... 

    Submaximal electromyography-driven musculoskeletal modeling of the human trunk during static tasks: Equilibrium and stability analyses

    , Article Journal of Electromyography and Kinesiology ; Volume 65 , 2022 ; 10506411 (ISSN) Ghezelbash, F ; Shirazi Adl, A ; Gagnon, D ; Shahvarpour, A ; Arjmand, N ; Eskandari, A. H ; Larivière, C ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    Conventional electromyography-driven (EMG) musculoskeletal models are calibrated during maximum voluntary contraction (MVC) tasks, but individuals with low back pain cannot perform unbiased MVCs. To address this issue, EMG-driven models can be calibrated in submaximal tasks. However, the effects of maximal (when data points include the maximum contraction) and submaximal calibration techniques on model outputs (e.g., muscle forces, spinal loads) remain yet unknown. We calibrated a subject-specific EMG-driven model, using maximal/submaximal isometric contractions, and simulated different independent tasks. Both approaches satisfactorily predicted external moments (Pearson's correlation ∼... 

    Oral administration of lithium chloride ameliorate spinal cord injury-induced hyperalgesia in male rats

    , Article PharmaNutrition ; Volume 21 , 2022 ; 22134344 (ISSN) Rahimi, G ; Mirsadeghi, S ; Rahmani, S ; Izadi, A ; Ghodsi, Z ; Ghodsi, S. M ; Rahimi Movaghar, V ; Kiani, S ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    Background: Numerous studies have described the neuroprotective effect of lithium in spinal cord injury in addition to its ameliorative impact on pain sensation. In the present study, we aim to examine the efficacy of 85 mg/kg as well as 50 mg/kg dosage of the lithium chloride (LiCl) through oral consumption in spinal cord injured rats and their effect on gene expression of three candidate genes, corresponding to the hyper-sensitization. Methods: Adult Wistar (male) rats were divided into four experimental groups: control; oral administration of LiCl with 85 mg/kg and 50 mg/kg dosage; and 10 % sucrose receiver as the vehicle. BBB and heat plantar tests were performed weekly throughout four... 

    The association between motor modules and movement primitives of gait: A muscle and kinematic synergy study

    , Article Journal of Biomechanics ; Volume 134 , 2022 ; 00219290 (ISSN) Esmaeili, S ; Karami, H ; Baniasad, M ; Shojaeefard, M ; Farahmand, F ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    In spite of the extensive literature on the analysis of the muscle synergies during gait, the functionality of these synergies has not been studied in detail. This study explored the relationship between the motor modules and the kinematic maneuvers involved in human walking. Motion and surface electromyography data (of 28 trunk and lower extremity muscles) were acquired from ten healthy subjects during ten trials of self-selected speed gait each. The joint angle trajectories were half-wave rectified and divided into two independent positive directional degrees-of-freedom. The muscle and kinematic synergies were both extracted using the non-negative matrix factorization (NNMF) technique and... 

    Assessment of expression of NF-κB-related genes in periodontitis

    , Article Gene Reports ; Volume 26 , 2022 ; 24520144 (ISSN) Ghafouri Fard, S ; Gholami, L ; Nazer, N ; Hussen, B. M ; Shadnoush, M ; Sayad, A ; Taheri, M ; Sharif University of Technology
    Elsevier Inc  2022
    Abstract
    Nuclear factor kappa B (NF-κB) is an important regulator of immune responses and is involved in the pathoetiology of periodontitis. We have measured levels of four NF-κB-related genes, namely CEBPA, CEBPA-DT, FBXL19-AS and DILC in blood and tissue samples of patients with chronic periodontitis compared with controls. Expression of CEBPA-DT was significantly lower in blood of patients compared with controls (Ratio of mean expression (RME) = 0.13, P value = 0.01). This pattern was also seen among male subgroups (RME = 0.10, P value = 0.01). FBXL19-AS was down-regulated in venous blood of total patients compared with controls (RME = 0.03, P value < 0.001) and in patients of both sexes compared... 

    Trunk dynamic stability assessment for individuals with and without nonspecific low back pain during repetitive movement

    , Article Human Factors ; Volume 64, Issue 2 , 2022 , Pages 291-304 ; 00187208 (ISSN) Asgari, M ; Mokhtarinia, H. R ; Sanjari, M. A ; Kahrizi, S ; Philip, G. C ; Parnianpour, M ; Khalaf, K ; Sharif University of Technology
    SAGE Publications Inc  2022
    Abstract
    Objective: This study aimed to employ nonlinear dynamic approaches to assess trunk dynamic stability with speed, symmetry, and load during repetitive flexion-extension (FE) movements for individuals with and without nonspecific low back pain (NSLBP). Background: Repetitive trunk FE movement is a typical work-related LBP risk factor contingent on speed, symmetry, and load. Improper settings/adjustments of these control parameters could undermine the dynamic stability of the trunk, hence leading to low back injuries. The underlying stability mechanisms and associated control impairments during such dynamic movements remain elusive. Method: Thirty-eight male volunteers (19 healthy, 19 NSLBP)... 

    Perylene diimide-POSS network for semi selective solid-phase microextraction of lung cancer biomarkers in exhaled breath

    , Article Analytica Chimica Acta ; Volume 1198 , 2022 ; 00032670 (ISSN) Soufi, G ; Bagheri, H ; Yeganeh Rad, L ; Minaeian, S ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    Lung cancer (LC) is the leading cause of cancer mortality so, the analysis of exhaled human breath has great significance for early non-invasive diagnosis. Poor selectivity and strong humidity are two bottlenecks for the application of gas sensors to exhaled breath analysis. The development of novel extractive phases for the analysis of exhaled breath by chromatography is therefore a lucrative object. Polyhedral oligomeric silsesquioxanes (POSS) are among the 3D porous materials whose unique properties make them promising coatings for solid-phase microextraction (SPME). Selective enrichment of polar or nonpolar targets depends on the pore size and functional groups on the POSSs. Herein, we... 

    Symmetric and asymmetric bimanual coordination and freezing of gait in Parkinsonian patients in drug phases

    , Article Annals of the New York Academy of Sciences ; Volume 1511, Issue 1 , 2022 , Pages 244-261 ; 00778923 (ISSN) Fathipour Azar, Z ; Azad, A ; Akbarfahimi, M ; Behzadipour, S ; Taghizadeh, G ; Sharif University of Technology
    John Wiley and Sons Inc  2022
    Abstract
    Freezing of gait (FOG) is a debilitating symptom in patients with Parkinson's disease (PD), which may be associated with motor control impairments in tasks other than gait. This study aimed to examine whether symmetric and asymmetric bimanual coordination is impaired in PD with FOG (PD +FOG) patients and whether dual-task and drug phases may affect bimanual coordination in these patients. Twenty PD +FOG patients, 20 PD patients without FOG (PD –FOG) performed symmetric and asymmetric functional bimanual tasks (reach to and pick up a box and open a drawer to press a pushbutton inside it, respectively) under single-task and dual-task conditions. PD patients were evaluated during on- and... 

    The association of clinicopathological characterizations of colorectal cancer with membrane-bound mucins genes and LncRNAs

    , Article Pathology Research and Practice ; Volume 233 , 2022 ; 03440338 (ISSN) Iranmanesh, H ; Entezari, M ; Rejali, L ; Nazemalhosseini-Mojarad, E ; Maghsoudloo, M ; Asadzadeh Aghdaei, H ; Zali, M. R ; Hushmandi, K ; Rabiee, N ; Makvandi, P ; Ashrafizadeh, M ; Hashemi, M ; Sharif University of Technology
    Elsevier GmbH  2022
    Abstract
    Background: Colorectal cancer (CRC) is one of the most common malignancies in the world and has a high mortality rate. It is believed that dysfunction in the expression of mucins and aberrant expression of some lncRNAs are associated with the occurrence and development of CRC. Therefore, the aim of the present study was to investigate the expression of MUC15, MUC16, MUC20, PCAT1, CCAT1 and HOTAIR genes in colorectal cancer and its relationship with clinicopathological variables. Materials and methods: This research was prospective case-control study. Tumors from CRC patients were collected from the Taleghani Hospital, Shahid Beheshti University of Medical Sciences, Tehran, Iran. RNA... 

    Behavior of olfactory-related frontal lobe oscillations in Alzheimer's disease and MCI: A pilot study

    , Article International Journal of Psychophysiology ; Volume 175 , 2022 , Pages 43-53 ; 01678760 (ISSN) Fatemi, S. N ; Aghajan, H ; Vahabi, Z ; Afzal, A ; Sedghizadeh, M. J ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    Slow-gamma (35-45 Hz) phase synchronization and the coupling between slow-gamma and low-frequency theta oscillations (4–8 Hz) are closely related to memory retrieval and cognitive functions. In this pilot study, we assess the Phase Amplitude Coupling (PAC) between theta and slow-gamma oscillatory bands and the quality of synchronization in slow-gamma oscillations using Phase Locking Value (PLV) on EEG data from healthy individuals and patients diagnosed with amnestic Mild Cognitive Impairment (aMCI) and Alzheimer's Disease (AD) during an oddball olfactory task. Our study indicates noticeable differences between the PLV and PAC values corresponding to olfactory stimulation in the three groups...