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    Numerical Investigation of Nano-Particles Dispersion and Deposition in Curved and Bifurcating Channels using Lattice Boltzmann Method

    , M.Sc. Thesis Sharif University of Technology Tehrani Saleh, Ali (Author) ; Moosavi, Ali (Supervisor)
    Abstract
    Investigation of transport and deposition of aerosol particles attracts interests in many fields of sciences. Various numerical and computational methods has been utilized in particulate flows studies. In recent relevant researches lattice Boltzmann method has been widely used and is reported to be a robust and efficient method. In present study, numerical investigation of dispersion and deposition of aerosol particles is performed in curved and bifurcating channels using LBM. Fluid flow simulations are performed using LBM while one-way coupling Lagrangian point of view is used for particle tracking. As the first showcase, transport and deposition of aerosol particles in channel flow with... 

    One Dimensional Simulation of Systemic and Pulmonary Cardiovascular System

    , M.Sc. Thesis Sharif University of Technology Ghadamsoltani, Elias (Author) ; Firoozabadi, Bahar (Supervisor) ; Saidi, Mohammad Saeid (Supervisor)
    Abstract
    Cardiovascular diseases are most common causes of deaths in the whole world. Nowadays, engineers and scientists in various fields become intent on finding solutions for prevention and recovery of these diseases. In this way, it is very important to know about the blood flow in arterial systems and its changes in various diseases. Numerical simulation of the blood flow beside of experimental studies could be very useful in this way. One dimensional simulation among various methods of numerical simulation was chosen to simulate a cardiovascular system since it has smaller computational cost and ability to modeling of whole arterial systems. It also is useful in extraction of medical indexes.... 

    Generating a Pulsatile Pulmonary Flow after Fontan Operation by Means of Computational Fluid Dynamics (CFD)

    , M.Sc. Thesis Sharif University of Technology Ghoreyshi, Mostafa (Author) ; Saidi, Mohamad Said (Supervisor) ; Firoozabadi, Bahar (Supervisor) ; Navaee Shirazei, Mohammad Ali (Co-Advisor)
    Abstract
    This study considers blood flow in total cavopulmonary connection (TCPC) morphology, which is created in Fontan surgical procedure in patients with single ventricle heart disease. Ordinary process of TCPC operation reduces the pulmonary blood flow pulsatility; because of right ventricle being bypassed. This phenomenon causes a lot of side effects for patients. A cardiac surgeon has suggested that keeping main pulmonary artery (MPA) partially open, would increase pulmonary flow pulsations. MPA gets closed in ordinary TCPC operation. The purpose of current study is to verify the effects of keeping MPA partially open on pulmonary flow pulsations, by means of computational fluid dynamics (CFD).... 

    Design, Simulation and Fabrication of Human Pulmonary Alveolus Model on a Microchip

    , Ph.D. Dissertation Sharif University of Technology Moghadas, Hajar (Author) ; Saeedi, Mohammad Saeed (Supervisor)
    Abstract
    Microfluidic systems create great development in diseases and drug delivery in various organs of the body. In this study, human pulmonary alveolar cell performance was evaluated from the perspective of the cell culture using a microfluidic system. For this purpose, numerical simulations of the microchip channels flow field are very important to select appropriate models. So in the first step, the flow field and particle deposition were simulated. Then an optimal model was selected based on key parameters such as cell feeding, shear stress exerted on the cell, particles distribution and also the limitations and possibilities for constructing. The numerical results show that the shear stress,... 

    Pulsating Pulmonary Blood Inflow in Total Cavopulmonary Connection (TCPC) after Fontan Surgery

    , M.Sc. Thesis Sharif University of Technology Moradi, Hamed (Author) ; Sayadi, Hassan (Supervisor) ; Firoozabadi, Bahar (Supervisor) ; Navabi Shirazi, Mohammad Ali (Co-Supervisor) ; Malakan Rad, Elaheh (Co-Supervisor)
    Abstract
    Patients with a single ventricle disease who have undergone Fontan surgery have always had long-term complications. These complications include pulmonary artery stiffness and decreased ability to exercise. In fact, due to removal of the right ventricle from the circulatory system, blood pressure and pulsatility inflow to total cavopulmonary connection (TCPC) are reduced following this surgery. Creating waves (radial displacement) on the IVC (Inferior Vena Cava) wall can increase pulmonary flow pulsations. The Objective of this study is to test the effect of induced wave amplitude on the pulmonary flow pulsations at the rest condition. Computational fluid dynamic (CFD) simulations were... 

    Microreactor Synthesis of Medicine by Catalyzed Coupling Reaction

    , M.Sc. Thesis Sharif University of Technology Hashemnezhad, Emad (Author) ; Kazemeini, Mohammad (Supervisor) ; Hosseinpour, Vahid (Co-Supervisor)
    Abstract
    Idiopathic pulmonary fibrosis is the most common type of pulmonary fibrosis that causes ulcers inside the lungs. In addition to Nintedanib, Pirfenidone is currently the only compound approved by the US Food and Drug Administration in 2014 for the treatment of idiopathic pulmonary fibrosis. Meanwhile, in the pharmaceutical industry, drug synthesis is usually done through batch-wise processes, and pirfenidone is currently only produced through batch-wise processes. Hence, this study aims to change the synthesis method of this drug, which is traditionally performed through batch-wise processes, to a continuous flow process. Therefore, a micro-reactor technology can be adopted which offers a... 

    3D-1D simulation of flow in fontan operation: effects of antegrade flow on flow pulsations

    , Article Scientia Iranica ; Vol. 21, issue. 4 , 2014 , pp. 1378-1389 ; ISSN: 10263098 Monjezi, M ; Ghoreyshi, S. M ; Saidi, M. S ; Navabi, M. A ; Firoozabad, B. D ; Sharif University of Technology
    Abstract
    This study considers blood flow in total cavopulmonary connection (TCPC) morphology created in Fontan surgical procedure in patients with a single ventricle heart disease. Ordinary process of TCPC operation reduces pulmonary blood flow pulsatility since the right ventricle being bypassed. This reduction may limit the long term outcome of Fontan circulation. There is an idea of increasing pulmonary flow pulsations by keeping Main Pulmonary Artery (MPA) partially open while it was closed in ordinary TCPC operation. The purpose of the present study is to verify the effects of Antegrade Flow (AF) coming through stenosed MPA on pulmonary flow pulsations. The 3D geometry is reconstructed from CT... 

    Numerical and 1-D modeling of pulmonary circulation along with lumped parameter modeling of the heart

    , Article 2013 20th Iranian Conference on Biomedical Engineering, ICBME 2013 ; December , 2013 , Pages 93-97 Salehi, S. S ; Firoozabadi, B ; Saidi, M. S ; Sharif University of Technology
    IEEE Computer Society  2013
    Abstract
    A one dimensional model of the pulmonary arterial network along with systemic circulation was introduced to quantify the human pulmonary artery hemodynamics. A lumped parameter model of the right ventricle was used as the inlet boundary condition. A time varying elastance related the volume and pressure of the right ventricle was imposed in the model. By using a four element Windkessel model, blood flow rate throughout the right ventricle was in hand. An asymmetric structured tree was chosen as the outlet boundary conditions. Simulation was based on solving one-dimensional equations of conservation of mass and momentum by using finite volume method. Blood flow rate, pressure and velocity... 

    Numerical modeling of pulsating inflow to the pulmonary arteries in TCPC morphology using FSI approach

    , Article ASME International Mechanical Engineering Congress and Exposition, Proceedings (IMECE) ; Volume 3 A , 2013 ; 9780791856215 (ISBN) Rajabzadeh, H. R ; Firoozabadi, B ; Saidi, M. S ; Sohrabi, S ; Mehr, S. M. N ; Sharif University of Technology
    2013
    Abstract
    The Fontan surgery is performed on patients with a single ventricle heart defect to prevent the combination of highlyoxygenated and poorly-oxygenated blood. Blood flow in total cavopulmonary connection (TCPC) which culminates an ordinary Fontan operation is practically steady-state but this flow is not appropriate for respiratory systems. This article investigates an approach in Fontan surgery that has been recently proposed in order to make the pulmonary blood flow pulsating. Moreover, for investigating the compliance of vessels and its effects on blood flow in TCPC, we have used the FSI (Fluid Structure Interaction) method as well as rigid wall assumption for comparison purposes. Our TCPC... 

    Evaluation of a novel extra-cardiac Fontan procedure with implantation of a biocompatible membrane

    , Article IRBM ; Volume 36, Issue 5 , 2015 , Pages 287-292 ; 19590318 (ISSN) Rajabzadeh Oghaz, H ; Firoozabadi, B ; Saidi, M. S ; Monjezi, M ; Navabi Shirazi, M. A ; Malakan Rad, E ; Sharif University of Technology
    Elsevier Masson SAS  2015
    Abstract
    Fontan operation is a final palliative surgical treatment for patients with a single ventricle (SV) physiology. One of the common disadvantages of Fontan operation is to generate a non-pulsatile flow instead of the normal pulsatile flow produced by contraction of the ventricle. Theoretically, in SV patients, maintaining the antegrade flow through pulmonary valve can produce flow pulsatility in the right and left pulmonary arteries. However, it not only increases the energy loss in the Fontan of total cavopulmonary pathway (TCPC), but also imposes an extra load on pulmonary arteries as well as the ventricle. In this study, the potential capability of pulmonary valve of the patient that can be... 

    Challenges and future prospects for the delivery of biologics: oral mucosal, pulmonary, and transdermal routes

    , Article AAPS Journal ; Volume 19, Issue 3 , 2017 , Pages 652-668 ; 15507416 (ISSN) Morales, J. O ; Fathe, K. R ; Brunaugh, A ; Ferrati, S ; Li, S ; Montenegro Nicolini, M ; Mousavikhamene, Z ; McConville, J. T ; Prausnitz, M. R ; Smyth, H. D. C ; Sharif University of Technology
    Springer New York LLC  2017
    Abstract
    Biologic products are large molecules such as proteins, peptides, nucleic acids, etc., which have already produced many new drugs for clinical use in the last decades. Due to the inherent challenges faced by biologics after oral administration (e.g., acidic stomach pH, digestive enzymes, and limited permeation through the gastrointestinal tract), several alternative routes of administration have been investigated to enable sufficient drug absorption into systemic circulation. This review describes the buccal, sublingual, pulmonary, and transdermal routes of administration for biologics with relevant details of the respective barriers. While all these routes avoid transit through the... 

    Pulsatile blood flow in total cavopulmonary connection: a comparison between Y-shaped and T-shaped geometry

    , Article Medical and Biological Engineering and Computing ; Volume 55, Issue 2 , 2017 , Pages 213-224 ; 01400118 (ISSN) Rajabzadeh Oghaz, H ; Firoozabadi, B ; Saidi, M. S ; Monjezi, M ; Navabi Shirazi, M. A ; Malakan Rad, E ; Sharif University of Technology
    Springer Verlag  2017
    Abstract
    Single-ventricle anomaly is a hereditary heart disease that is characterized by anatomical malformations. The main consequence of this malformation is desaturated blood flow, which without proper treatment increases the risk of death. The classical treatment is based on a three-stage palliative procedure which should begin from the first few days of patient’s life. The final stage is known as Fontan procedure, in which inferior vena cava is directly connected to pulmonary arteries without going through the ventricle. This connection is called total cavopulmonary connection (TCPC). After surgery, the single ventricle supplies adequate and saturated systemic blood flow to the body; however,... 

    Design and fabrication of an ubiquitous, low-cost, and wearable respiratory bio-sensor using ionic soft materials

    , Article 26th National and 4th International Iranian Conference on Biomedical Engineering, ICBME 2019, 27 November 2019 through 28 November 2019 ; 2019 , Pages 55-59 ; 9781728156637 (ISBN) Annabestani, M ; Mirzaei, I ; Esmaeili Dokht, P ; Fardmanesh, M
    Institute of Electrical and Electronics Engineers Inc  2019
    Abstract
    The respiratory system is a vital organ system which makes breathing and gas exchange possible for human's body. The loss of functionality in this system is due to either genetical problems or environmental issues like pollution or toxic gases which in many cases is inevitable. These circumstances may cause different respiratory diseases which may not be curable presently but their side effects can be partly controlled by careful and timely analysis improving the quality of patient's life. So, an appropriate device for conducting different analysis can be effective for people who suffer from respiratory diseases such as chronic obstructive pulmonary disease (COPD), asthma, occupational lung... 

    Rhythmic air-puff into nasal cavity modulates activity across multiple brain areas: A non-invasive brain stimulation method to reduce ventilator-induced memory impairment

    , Article Respiratory Physiology and Neurobiology ; Volume 287 , 2021 ; 15699048 (ISSN) Ghazvineh, S ; Salimi, M ; Nazari, M ; Garousi, M ; Tabasi, F ; Dehdar, K ; Salimi, A ; Jamaati, H ; Mirnajafi Zadeh, J ; Arabzadeh, E ; Raoufy, M. R ; Sharif University of Technology
    Elsevier B.V  2021
    Abstract
    Mechanical ventilation (MV) can result in long-term brain impairments that are resistant to treatment. The mechanisms underlying MV-induced brain function impairment remain unclear. Since nasal airflow modulates brain activity, here we evaluated whether reinstating airflow during MV could influence the memory performance of rats after recovery. Rats were allocated into two study groups: one group received rhythmic air-puff into the nasal cavity during MV and a control group that underwent ventilation without air-puff. During MV, air-puffs induced time-locked event potentials in OB, mPFC and vHPC and significantly increased the oscillatory activity at the air-puff frequency. Furthermore, in... 

    Spatiotemporal registration and fusion of transthoracic echocardiography and volumetric coronary artery tree

    , Article International Journal of Computer Assisted Radiology and Surgery ; Volume 16, Issue 9 , 2021 , Pages 1493-1505 ; 18616410 (ISSN) Ghodsizad, T ; Behnam, H ; Fatemizadeh, E ; Faghihi Langroudi, T ; Bayat, F ; Sharif University of Technology
    Springer Science and Business Media Deutschland GmbH  2021
    Abstract
    Purpose: Cardiac multimodal image fusion can offer an image with various types of information in a single image. Many coronary stenosis, which are anatomically clear, are not functionally significant. The treatment of such kind of stenosis can cause irreversible effects on the patient. Thus, choosing the best treatment planning depend on anatomical and functional information is very beneficial. Methods: An algorithm for the fusion of coronary computed tomography angiography (CCTA) as an anatomical and transthoracic echocardiography (TTE) as a functional modality is presented. CCTA and TTE are temporally registered using manifold learning. A pattern search optimization algorithm, using... 

    NAFAS: non-rigid air flow active sensor, a cost-effective, wearable, and ubiquitous respiratory bio-sensor

    , Article IEEE Sensors Journal ; Volume 21, Issue 7 , 2021 , Pages 9530-9537 ; 1530437X (ISSN) Annabestani, M ; Esmaeili Dokht, P ; Khazaee Nejad, S ; Fardmanesh, M ; Sharif University of Technology
    Institute of Electrical and Electronics Engineers Inc  2021
    Abstract
    A Non-rigid Air Flow Active Sensor (NAFAS) to detect the respiratory patterns is introduced in this paper. The main part of NAFAS is an ionic electroactive polymer-based ( ${i}$ -EAP) soft sensor. It can accurately detect breathing patterns and has promising features to develop low cost, wearable, and ubiquitous spirometers. Patients with respiratory diseases need to take pulmonary function tests consistently. Hence, it is time-consuming and expensive. To address these problems, NAFAS presents point-of-care testing (POCT) of the respiratory system's function. The proposed ${i}$ -EAP based sensor is a small strip of Ionic Polymer Metal Composite (IPMC) that has been fabricated using a Nafion... 

    Reducing the risk of death induced by aluminum phosphide poisoning: The new therapies

    , Article Chemosphere ; Volume 294 , 2022 ; 00456535 (ISSN) Naddafi, M ; Abouei Mehrizi, A ; Eghbal, M. A ; Ghazi Khansari, M ; Azarmi, Y ; Sattari, M. R ; Karaman, C ; Karimi, F ; Alizadeh, M ; Yazdani, M. N ; Hosseinpour, P ; Sharif University of Technology
    Elsevier Ltd  2022
    Abstract
    Numerous people suffer from accidental or deliberate exposure to different pesticides when poisoning with aluminum phosphate (AlP) is increasing in the eastern countries. Aluminum phosphate is a conventional insecticide that quickly reacts with water or the moistures in the atmosphere and produces fatal phosphine gas, which absorbs quickly by the body. Oral consumption or inhalation of AlP leads to excessive reaction of the body such as fatigue, vomiting, fever, palpitation, vasodilatory shock, increasing blood pressure, cardiac dysfunction, pulmonary congestion, shortness of breath, and death. The garlic smell from the patient's mouth or exhale is one of the methods to recognize the... 

    Asthma induces psychiatric impairments in association with default mode and salience networks alteration: A resting-state EEG study

    , Article Respiratory Physiology and Neurobiology ; Volume 300 , 2022 ; 15699048 (ISSN) Gholami Mahtaj, L ; Salimi, M ; Nazari, M ; Tabasi, F ; Bamdad, S ; Dehdar, K ; Mikaili, M ; Mahdaviani, S. A ; Salari, F ; Lookzadeh, S ; Jamaati, H ; Salimi, A ; Raoufy, M. R ; Sharif University of Technology
    Elsevier B.V  2022
    Abstract
    Asthma is a chronic inflammatory disease associated with a high prevalence of psychiatric disorders. There are specific brain networks responsible for emotional processes, including two important networks associated with psychiatric problems: the default mode network (DMN), which is more active in the resting state, and the salience network (SN), which is structurally connected to DMN. Although previous studies suggested that neuro-phenotypes of asthma may be recognizable by the neural activity of brain circuits, an association between the brain's functional alterations and psychiatric impairments induced by asthma remains unknown. We aimed to assess DMN and SN activity and its association...