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Total 44 records

    Design and Numerical Simulation of a Micro-chip for Separating CTCs from Peripheral Blood

    , M.Sc. Thesis Sharif University of Technology Niknam, Hamid Reza (Author) ; Saeedi, Mohammad Saeed (Supervisor)
    Abstract
    According to studies, cancer is the second leading cause of death in the world and millions of people die from this disease every year. Early diagnosis is one of the most important factors in controlling and treating the disease. The ability of circulating tumor cells to diagnose and monitor the disease has led many researchers to focus on studying and researching these cells in recent years. However, due to the fact that the concentration of this type of cells in the blood is very low, their isolation is associated with challenges. Various methods isolate CTCs based on physical, biological and other differences in characteristics. In this study, we investigate performance of a microfluidic... 

    Deriving an analytical model for hydro-magnetic micro flow controller

    , Article 6th International Conference on Nanochannels, Microchannels, and Minichannels, ICNMM2008, Darmstadt, 23 June 2008 through 25 June 2008 ; Issue PART B , June , 2008 , Pages 1139-1146 ; 0791848345 (ISBN); 9780791848340 (ISBN) Esmaily Moghadam, M ; Shafii, M. B ; ASME ; Sharif University of Technology
    2008
    Abstract
    Fluid control, namely pumping and valving, is a critical factor in the performance of micro-fluidic systems. In recent years a variety of micro-fluidic systems are developed for the purpose of miniaturizing fluid handling, and chemical analysis to develop Lab On a Chip (LOC) technology. The mentioned facts resulted in design and fabrication of a novel hydromagnetic flow controller. The idea behind this device is that magnetic particles, mixed and dispersed in a carrier liquid, can be accumulated in the form of a piston. Depending upon dragging speed of these pistons, which itself is a function of switching time, this device can be used to either increase (pumping) or decrease (valving) the... 

    Numerical Simulation of Organ on Chip Systems

    , M.Sc. Thesis Sharif University of Technology Mehrdel, Pouya (Author) ; Saeedi, Mohammad Saeed (Supervisor) ; Sani, Mehdi ($item.subfieldsMap.e)
    Abstract
    Discovering new medicines and generally medical researches, are time consuming and expensive. But recent achievements in cell culturing methods and micro and nano-engineering techniques have enabled the researchers to investigate new medicines in a lesser time and price. Huh et al. successfully fabricated the lung on chip device. This device is consisted of three chambers. The middle chamber is separated in two equal parts and side chambers were considered in order to apply normal breathing. Periodic deformation was needed to apply the natural condition of cultured cells by expansion and contraction. Numerical simulation was needed to investigate the properties of flow in this kind of... 

    Numerical Simulation of Micro channel for Cells Counting Based on the Impedance Measurement of Cell Lysate

    , M.Sc. Thesis Sharif University of Technology Khademi, Maryam (Author) ; Saidi, Mohammad Said (Supervisor) ; Sani, Mahdi ($item.subfieldsMap.e)
    Abstract
    Nowadays cell-based microfluidic devices have many applications. One of the applications is disease diagnosis according to number of cells. Cell counting has different methods, such as optical cell counting, flow cytometry, hemocytometry, coulter counters,and so on. One of the methods of cells counting is based on measurement of changes in impedance or conductivity of surrounding medium because ions are released from surface-immobilized cells inside a micr of luidic channel.The method of cell lysate impedance spectroscopy is sensitive enough and it was offered for detecting and enumerating CD4+ cells in HIV patients. In this study,... 

    Numerical Simulation and Characterization of an Electro-kinetic Micro-Mixer

    , M.Sc. Thesis Sharif University of Technology Ghaderian, Sepideh (Author) ; Saeedi, Mohammad Saeed (Supervisor) ; Sani, Mahdi (Supervisor)
    Abstract
    Most of the current literature on the simulation of the electro-osmotic flow in micro-channels decompose electric potential to two components; internal and external potentials. They usually approximate the near wall changes in the ion concentration (called double layer) which is physically responsible for electro-osmotic force by a model (like Poisson equilibrium distribution or Debye-Huckel approximation). There are reports in the literature which show that the approximations lose their fidelity for more complex situations. In this thesis we solve the full system of Nernst-Planck and Navier-Stokes equations by resolving electric double layer. The proposed... 

    Particle Focusing on a Lab on a Disk System

    , M.Sc. Thesis Sharif University of Technology Heydarabadipour, Adel (Author) ; Shamloo, Amir (Supervisor)
    Abstract
    In many microfluidic devices, focusing particles into a narrow stream is usually an essential step prior to counting, detecting, and sorting them. By installation of microfluidic laboratory functions on a rotating disk, new devices called Lab-on-a-disks, which have plenty of advantages in comparison to ordinary Lab-on-a-chips, shape. In this study, to the best of our knowledge for the first time, a Lab-on-a-disk device is designed and fabricated in order to focus particles prior to detecting them by a conventional CD-ROM as a strong optical system. Hydrophoresis method, using slanted obstacles to induce transverse pressure gradients, is utilized to focus particles. In this regard, the... 

    Rheology Effects on Reaction-diffusion Mechanisms in a Y-shaped Micro Fluidic Mixer

    , M.Sc. Thesis Sharif University of Technology Hellisaz, Hamed (Author) ; Saeedi, Mohammad Hassan (Supervisor) ; Kazemzadeh Hannani, Siamak ($item.subfieldsMap.e)
    Abstract
    Numerous applications of Lab on a Chips (LOCs) in chemical/biochemical analyses as well as the emergence of advanced methods for their manufacture attracts many researchers’ attention to these micro instruments. Low sample volume consumption and their high controllability are accounted as the main advantage of LOC systems. Micromixers are among the main components of any LOC in which mixing and/or reaction among two components occur. Micromixers have many potential applications in biological and medical sciences, and so they are repeatedly charged by biofluids. Due to sensibility of biofluids, to avoid disintegration, applying electroosmotic flow instead of pressure-induced flow has priority... 

    Design and Fabrication of a Microfluidic Chip for Live and Dead Cell Separation

    , M.Sc. Thesis Sharif University of Technology Tajik, Parham (Author) ; Firouzbakhsh, Keykhosrow (Supervisor) ; Saeedi, Mohammad Saeed (Supervisor)
    Abstract
    The recent breakthroughs in the lab-on-a-chip technology will not be directly used as clinical devices unless the specific applications are carefully tested and certified. As there is a growing trend towards microfluidic devices for biomedical research, an active microfluidic device was developed. Common microfabrication methods were used to develop a microchip to separate and concentrate live and dead cells based on the dielectrophoresis phenomenon. Unique capabilities of the dielectrophoresis phenomenon make it a powerful tool for micro particle manipulation in micro scale. In this research, geometry for the mentioned purpose is designed and optimized. Three-dimensional microelectrodes are... 

    Designing and Manufactureing a Concentration Gradient Generator

    , M.Sc. Thesis Sharif University of Technology Ebadi, Milad (Author) ; kashaninezhad, navid (Supervisor)
    Abstract
    Nowadays, due to the growing need of the human to further improve the health of the community, research in the field of pharmacology as well as simulation of the cell culture environment is increasing. One of the most important requirements for simulating cell culture is the use of concentration gradient in culture media. The reason for this is the dependence of cellular activity on the presence of a gradient of concentration in the environment. Also, in drug investigations, in order to speed up the examination of different drugs and reduce the amount of drug that will used, different concentrations of the drug should be considered simultaneously in the microchips. Therefore, to make the... 

    Separation and Microfluidic Analysis of one Cancer Biomarker (Exosome) by Means of Microfluidic Chip Microfluidc Analysis Exosome Toward Liquid Biopsy for Cancer Tumor Cell

    , M.Sc. Thesis Sharif University of Technology Madani, Mohammad (Author) ; Saidi, Mohammad Said (Supervisor) ; Firouzabadi, Bahar (Co-Supervisor)
    Abstract
    The recent breakthroughs in the lab-on-a-chip technology will not be directly used as clinical devices unless the specific applications are carefully tested and certified. As there is a growing trend towards microfluidic devices for biomedical research, an active microfluidic device was developed. Common microfabrication methods were used to develop a microchip to separate and concentrate exosome and particular cell based on the dielectrophoresis phenomenon. Unique capabilities of the dielectrophoresis phenomenon make it a powerful tool for micro particle manipulation in micro scale. In this research, geometry for the mentioned purpose is designed and optimized. Three-dimensional... 

    Separation of Plasma from Blood Using a Dielectrophoresis-Assisted Microfluidic Device

    , M.Sc. Thesis Sharif University of Technology Shams, Mehran (Author) ; Mohammadi, Ali Asghar (Supervisor) ; Soltanieh, Mohammad (Supervisor)
    Abstract
    % of human blood makes up of plasma, that this plasma is a rich source of proteins that can be used as biomarkers for a variety of clinical diseases and laboratory research, therefore, it is necessary that the plasma be separate by a high purity percentage. Using a centrifuge It is a common method used to separate plasma from blood, but because it requires large equipment and a large volume of blood, as well as stress caused by centrifugal force, increases the probability of damage to the biomarkers, so it has been tried today that Use methods that are easy to transport and require a small amount of blood. The idea of using the microfluidic device has been put forward for the purpose of... 

    Advancement of sensor integrated organ-on-chip devices

    , Article Sensors (Switzerland) ; Volume 21, Issue 4 , 2021 , Pages 1-44 ; 14248220 (ISSN) Clarke, G.A ; Hartse, B. X ; Niaraki Asli, A. E ; Taghavimehr, M ; Hashemi, N ; Abbasi Shirsavar, M ; Montazami, R ; Alimoradi, N ; Nasirian, V ; Ouedraogo, L. J ; Hashemi, N. N ; Sharif University of Technology
    MDPI AG  2021
    Abstract
    Organ-on-chip devices have provided the pharmaceutical and tissue engineering worlds much hope since they arrived and began to grow in sophistication. However, limitations for their applicability were soon realized as they lacked real-time monitoring and sensing capabilities. The users of these devices relied solely on endpoint analysis for the results of their tests, which created a chasm in the understanding of life between the lab the natural world. However, this gap is being bridged with sensors that are integrated into organ-on-chip devices. This review goes in-depth on different sensing methods, giving examples for various research on mechanical, electrical resistance, and bead-based... 

    Nanotechnology-assisted microfluidic systems: From bench to bedside

    , Article Nanomedicine ; Volume 16, Issue 3 , 2021 , Pages 237-258 ; 17435889 (ISSN) Rabiee, N ; Ahmadi, S ; Fatahi, Y ; Rabiee, M ; Bagherzadeh, M ; Dinarvand, R ; Bagheri, B ; Zarrintaj, P ; Saeb, M. R ; Webster, T. J ; Sharif University of Technology
    Future Medicine Ltd  2021
    Abstract
    With significant advancements in research technologies, and an increasing global population, microfluidic and nanofluidic systems (such as point-of-care, lab-on-a-chip, organ-on-a-chip, etc) have started to revolutionize medicine. Devices that combine micron and nanotechnologies have increased sensitivity, precision and versatility for numerous medical applications. However, while there has been extensive research on microfluidic and nanofluidic systems, very few have experienced wide-spread commercialization which is puzzling and deserves our collective attention. For the above reasons, in this article, we review research advances that combine micro and nanotechnologies to create the next... 

    Emerging phospholipid nanobiomaterials for biomedical applications to lab-on-a-chip, drug delivery, and cellular engineering

    , Article ACS Applied Bio Materials ; 2021 ; 25766422 (ISSN) Rahimnejad, M ; Rabiee, N ; Ahmadi, S ; Jahangiri, S ; Sajadi, S. M ; Akhavan, O ; Saeb, M. R ; Kwon, W ; Kim, M ; Hahn, S. K ; Sharif University of Technology
    American Chemical Society  2021
    Abstract
    The design of advanced nanobiomaterials to improve analytical accuracy and therapeutic efficacy has become an important prerequisite for the development of innovative nanomedicines. Recently, phospholipid nanobiomaterials including 2-methacryloyloxyethyl phosphorylcholine (MPC) have attracted great attention with remarkable characteristics such as resistance to nonspecific protein adsorption and cell adhesion for various biomedical applications. Despite many recent reports, there is a lack of comprehensive review on the phospholipid nanobiomaterials from synthesis to diagnostic and therapeutic applications. Here, we review the synthesis and characterization of phospholipid nanobiomaterials... 

    Cancer cell enrichment on a centrifugal microfluidic platform using hydrodynamic and magnetophoretic techniques

    , Article Scientific Reports ; Volume 11, Issue 1 , 2021 ; 20452322 (ISSN) Shamloo, A ; Naghdloo, A ; Besanjideh, M ; Sharif University of Technology
    Nature Research  2021
    Abstract
    Isolation of rare cancer cells is one of the important and valuable stages of cancer research. Regarding the rarity of cancer cells in blood samples, it is important to invent an efficient separation device for cell enrichment. In this study, two centrifugal microfluidic devices were designed and fabricated for the isolation of rare cancer cells. The first design (passive plan) employs a contraction–expansion array (CEA) microchannel which is connected to a bifurcation region. This device is able to isolate the target cells through inertial effects and bifurcation law. The second design (hybrid plan) also utilizes a CEA microchannel, but instead of using the bifurcation region, it is... 

    Design and Simulation of CMOS Based Magnetic Sensor for Biosensing Applications

    , M.Sc. Thesis Sharif University of Technology Mafi, Alireza (Author) ; Akbari, Mahmood (Supervisor) ; Fotowat-Ahmady, Ali (Supervisor)
    Abstract
    This paper presents a scalable and ultrasensitive magnetic biosensing scheme based on on-chip LC resonance frequency-shifting. The sensor transducer gain is demonstrated as being location-dependent on the sensing surface and proportional to the local polarization magnetic field strength |B|2 generated by the sensing inductor. To improve the gain uniformity, a periodic coil is proposed as a substitution for the standard process coil. As an implementation example, the circuit is designed in a 65nm CMOS process. The spatially uniform sensor gain of the array is verified by COMSOL simulations. Overall, the presented sensor demonstrates an improvement in the uniformity of the inductor’s magnetic... 

    Numerical Study of Enhancement of Inflection Point Focusing for Blood Cell Separation

    , M.Sc. Thesis Sharif University of Technology Mirtalebi, Elnaz (Author) ; Moosavi, Ali (Supervisor) ; Sadrhosseini, Hani (Co-Supervisor)
    Abstract
    Today, the determination and therapy of numerous illnesses, including malignant growth, relies upon the information and assessment of platelets, so blood testing and cell examination is fundamental to survey the movement of disease. The lab on a chip innovation is utilized as an extremely productive device in cell studies. The lab on a chip is used as a foundation and a substrate for making a legitimate stream for cell processes in medication. This innovation is a gadget or framework with millimeters or centimeters aspects like a chip, and it performs research facility handling on a micron-scale. In spite of the fact that it has a few impediments, it has so many values; for example, it... 

    Design and Manufacturing of a Setup for Solid-state Nanopore Fabrication

    , M.Sc. Thesis Sharif University of Technology Bayat, Alireza (Author) ; Akbari, Javad (Supervisor) ; Taghipour, Mojtaba (Supervisor)
    Abstract
    The aim of the current research is to study the process of making a solidstate nanopore by molding from PDMS polymer and to make a laboratory sample of a solidstate nanopore manufacturing device using this method. Solid-state nanopores are used to control ion transport in microfluidic channels,lab-on-a-chip detection to study nucleic acids and proteins, desalination, nanofluidic transistors,single-cell sensing tools, and particle classification. In general, the smaller the nanopore, the shorter the length and the higher the mechanical stability, the better the performance. In this research, chips have been made on which there is a blade with a sharpness of 10 nanometers and a height of 10... 

    Urine Analysis by a Microfluidic Paper-Based Device for Renal Function Test

    , M.Sc. Thesis Sharif University of Technology Pourghanbari Marvast, Mohadeseh (Author) ; Saadatmand, Maryam (Supervisor)
    Abstract
    Chronic kidney disease is one of the silent diseases that progresses slowly, often without symptoms, and can eventually lead to kidney loss. Early detection of this disease can help diagnose it and prevent further problems. Urinary creatinine is an effective biomarker for early diagnosis of chronic kidney disease, but methods available in clinics are problematic for people living in disadvantaged areas because of the high cost and the need for 24-hour urine collection. Currently, paper-based microfluidic devices are being developed because they are easy to manufacture, inexpensive, the fluid is permeable by capillary force, and no additional equipment is needed. In this work, to fabricate a... 

    Recent approaches to mRNA vaccine delivery by lipid-based vectors prepared by continuous-flow microfluidic devices

    , Article Future medicinal chemistry ; Volume 14, Issue 21 , 2022 , Pages 1561-1581 ; 17568927 (ISSN) Ghasemi Toudeshkchouei, M ; Tavakoli, A ; Mohammadghasemi, H ; Karimi, A ; Ai, J ; Rabiee, M ; Rabiee, N ; Sharif University of Technology
    NLM (Medline)  2022
    Abstract
    Advancements in nanotechnology have resulted in the introduction of several nonviral delivery vectors for the nontoxic, efficient delivery of encapsulated mRNA-based vaccines. Lipid- and polymer-based nanoparticles (NP) have proven to be the most potent delivery systems, providing increased delivery efficiency and protection of mRNA molecules from degradation. Here, the authors provide an overview of the recent studies carried out using lipid NPs and their functionalized forms, polymeric and lipid-polymer hybrid nanocarriers utilized mainly for the encapsulation of mRNAs for gene and immune therapeutic applications. A microfluidic system as a prevalent methodology for the preparation of NPs...