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    Modeling of aqueous biomolecules using a new free-volume group contribution model

    , Article Industrial and Engineering Chemistry Research ; Volume 48, Issue 8 , 2009 , Pages 4109-4118 ; 08885885 (ISSN) Pazuki, G. R ; Taghikhani, V ; Vossoughi, M ; Sharif University of Technology
    2009
    Abstract
    In this article, a new group contribution model is suggested for obtaining the thermodynamic properties of biomolecules in aqueous solutions. Accordingly, a Freed-FV model has been applied for the combinatorial free-volume term. The activity coefficients, solubilities, densities, and vapor pressures of amino acids and simple peptides in aqueous solutions were correlated, using the proposed group contribution model. Group interaction parameters of the proposed model were obtained by use of experimental data from amino acids available in the literature. The results demonstrate that the group contribution model can accurately correlate activity coefficient, solubility, density, and vapor... 

    Fabrication of modified TiO 2 nanoparticle carbon paste electrode for simultaneous determination of dopamine, uric acid, and l-cysteine

    , Article Journal of Solid State Electrochemistry ; Volume 13, Issue 9 , 2009 , Pages 1433-1440 ; 14328488 (ISSN) Mazloum Ardakani, M ; Talebi, A ; Naeimi, H ; Nejati Barzoky, M ; Taghavinia, N ; Sharif University of Technology
    2009
    Abstract
    A carbon paste electrode, modified with 2, 2″-[1,7- hepthandiylbis(nitriloethylidyne)]-bis-hydroquinone and TiO 2 nanoparticles, was used for the simultaneous determination of dopamine (DA), uric acid (UA), and l-cysteine. The study was carried out by using cyclic voltammetry, chronoamperometry, and square wave voltammetry (SWV) techniques. Some kinetic parameters such as the electron transfer coefficient (α) and heterogeneous rate constant (k s) were also determined for the DA oxidation. A dynamic range of 8.0-1400 μM, with the detection limit of 8.4∈×∈10 -7 M for DA, was obtained using SWV (pH∈=∈7.0). The prepared electrode was successfully applied for the determination of DA, UA, and... 

    Silver nanoparticles modified carbon nanotube paste electrode for simultaneous determination of dopamine and ascorbic acid

    , Article Journal of Electroanalytical Chemistry ; Volume 633, Issue 1 , 2009 , Pages 85-91 ; 15726657 (ISSN) Tashkhourian, J ; Hormozi Nezhad, M. R ; Khodavesi, J ; Javadi, S ; Sharif University of Technology
    Elsevier  2009
    Abstract
    A novel modified carbon-paste electrode was employed for the simultaneous determination of dopamine (DA) and ascorbic acid (AA) with good selectivity and high sensitivity. Silver nanoparticle and carbon nanotube modified carbon-paste electrode (Ag/CNT-CPE) displayed excellent electrochemical catalytic activities towards dopamine (DA) and ascorbic acid (AA). The oxidation overpotentials of DA and AA were decreased significantly compared with those obtained at the bare CPE. Differential pulse voltammetry was used for the simultaneous determination of DA and AA. The peak separation between DA and AA was 67 mV. The calibration curves for DA and AA were obtained in the range of 8.0 × 10-7-6.4 ×... 

    An in vitro study of bare and poly(ethylene glycol)-co-fumarate-coated superparamagnetic iron oxide nanoparticles: A new toxicity identification procedure

    , Article Nanotechnology ; Volume 20, Issue 22 , 2009 ; 09574484 (ISSN) Mahmoudi, M ; Simchi, A ; Imani, M ; Milani, A. S ; Stroeve, P ; Sharif University of Technology
    2009
    Abstract
    As the use of superparamagnetic iron oxide nanoparticles (SPION) in biomedical applications increases (e.g. for targeting drug delivery and imaging), patients are likely to be exposed to products containing SPION. Despite their high biomedical importance, toxicity data for SPION are limited to date. The aim of this study is to investigate the cytotoxicity of SPION and its ability to change cell medium components. Bare and poly(ethylene glycol)-co-fumarate (PEGF)-coated SPION with narrow size distributions were synthesized. The particles were prepared by co-precipitation using ferric and ferrous salts with a molar Fe3+/Fe2+ ratio of 2. Dulbecco's modified Eagle's medium (DMEM) and primary... 

    Enzymatically crosslinked hyaluronic acid microgels as a vehicle for sustained delivery of cationic proteins

    , Article European Polymer Journal ; Volume 115 , 2019 , Pages 234-243 ; 00143057 (ISSN) Jooybar, E ; Abdekhodaie, M. J ; Mousavi, A ; Zoetebier, B ; Dijkstra, P. J ; Sharif University of Technology
    Elsevier Ltd  2019
    Abstract
    In this study, a novel biodegradable hyaluronic acid (HA) based microgel were prepared via enzymatic crosslinking of tyramine conjugated HA (HA-TA) in an inverse microemulsion. HA-TA microdroplets were crosslinked within a few seconds in the presence of horseradish peroxidase (HRP) and hydrogen peroxide (H 2 O 2 ). The high water content of the polymeric network and the inherent negative charge of the HA-TA microgels provided a suitable platform for encapsulation of cationic proteins like lysozyme and TGF-β1 growth factor. The results demonstrated that lysozyme was released, after an initial burst release, in a suitable sustained manner over a period of four weeks. Both diffusion and... 

    A systematic investigation on the bactericidal transient species generated by photo-sensitization of natural organic matter (NOM) during solar and photo-Fenton disinfection of surface waters

    , Article Applied Catalysis B: Environmental ; Volume 244 , 2019 , Pages 983-995 ; 09263373 (ISSN) Kohantorabi, M ; Giannakis, S ; Gholami, M. R ; Feng, L ; Pulgarin, C ; Sharif University of Technology
    Elsevier B.V  2019
    Abstract
    In this work, the role of dissolved oxygen in the solar and the photo-Fenton-mediated E. coli inactivation process was put under scrutiny. The effect of transient species that were produced in the presence of various natural organic matter isolates (NOM), namely Suwannee River (SR) NOM, Nordic Reservoir (NR) NOM, SR Humic acid (SRHA), and SR Fulvic acid (SRFA) was studied in detail. The role of 1 O2 in this reaction was systematically evaluated by modifying the O2 concentration (N2/O2 purging) and the matrix composition (10, 50, and 100% deuterium oxide (D2O) v/v). In the presence of NOM, 1 O2 was generated and the enhancement of E. coli inactivation rate due to charge transfer from triplet... 

    Folic acid-functionalized niosomal nanoparticles for selective dual-drug delivery into breast cancer cells: An in-vitro investigation

    , Article Advanced Powder Technology ; Volume 31, Issue 9 , 2020 , Pages 4064-4071 Akbarzadeh, I ; Tavakkoli Yaraki, M ; Ahmadi, S ; Chiani, M ; Nourouzian, D ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    In this study, a folic acid-functionalized niosome was formulated and loaded with letrozole and curcumin as a promising drug carrier system for chemotherapy of the breast cancer cells. The formulation process was optimized by varying the type of Span 80 and total lipid to drug ratio, where Span 80 and lipid to drug molar ratio of 10 resulted in the niosomes with maximum encapsulation of both drugs but minimum size. The developed niosomal formulation showed a great storage stability up to one month with the small changes in drug encapsulation efficiency and size during the storage. In addition, they showed a pH-dependent release behaviour with slow drug release at physiological pH (7.4) while... 

    Photocatalytic filtration reactors equipped with bi-plasmonic nanocomposite/poly acrylic acid-modified polyamide membranes for industrial wastewater treatment

    , Article Separation and Purification Technology ; Volume 236 , 2020 Amoli-Diva, M ; Irani, E ; Pourghazi, K ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    In this study, two new composite membranes with antifouling and anti-biofouling properties were prepared through the modification of commercial polyamide (PA) discs using combination of in-situ polymerization of polyacrylic acid (PAA) and grafting of two synthesized bi-plasmonic Au-Ag and Ag-Au photocatalysts. The synthesis and characterization of the photocatalysts in batch mode were discussed in details as primary studies. Two intense 405-nm and 532-nm lasers for Ag-Au and Au-Ag photocatalysts, respectively and a solar-simulated xenon lamp for both photocatalysts were applied for photodegradation studies and the results were compared. In addition, the effect of other parameters such as... 

    Potential effects of alginate–pectin biocomposite on the release of folic acid and their physicochemical characteristics

    , Article Journal of Food Science and Technology ; Volume 57, Issue 9 , March , 2020 , Pages 3363-3370 Kiaei Pour, P ; Alemzadeh, I ; Vaziri, A. S ; Beiroti, A ; Sharif University of Technology
    Springer  2020
    Abstract
    Potential effects of folates on the treatment of several human diseases like cognitive function, neural tube defects, coronary heart disease and certain kinds of cancers have been discovered. However, the stability of folic acid against adverse conditions is a great concern. The present study investigates various alginate (A)–pectin (P) gastrointestinal-resistant hydrogel to immobilize folic acid. This involves evaluating different compositions of alginate–pectin to achieve higher encapsulation efficiency and stability during simulated gastric (SG) and simulated intestinal (SI) conditions. Coated alginate hydrogels with pectin resulted significant (p < 0.05) better protection of folic acid... 

    Facile design of autogenous stimuli-responsive chitosan/hyaluronic acid nanoparticles for efficient small molecules to protein delivery

    , Article Journal of Materials Chemistry B ; Volume 8, Issue 32 , 2020 , Pages 7275-7287 Sabourian, P ; Ji, J ; Lotocki, V ; Moquin, A ; Hanna, R ; Frounchi, M ; Maysinger, D ; Kakkar, A ; Sharif University of Technology
    Royal Society of Chemistry  2020
    Abstract
    Easily assembled and biocompatible chitosan/hyaluronic acid nanoparticles with multiple stimuli-responsive ability are ideally suited for efficient delivery of therapeutic agents under specific endogenous triggers. We report a simple and versatile strategy to formulate oxidative stress and pH-responsive chitosan/hyaluronic acid nanocarriers with high encapsulation efficiencies of small drug molecules and nerve growth factor protein. This is achieved through invoking the dual role of a thioketal-based weak organic acid to disperse and functionalize low molecular weight chitosan in one-pot. Thioketal embedded chitosan/hyaluronic acid nanostructures respond to oxidative stress and show... 

    Study and optimization of amino acid extraction by emulsion liquid membrane

    , Article Separation Science and Technology ; Volume 43, Issue 11-12 , 2008 , Pages 3075-3096 ; 01496395 (ISSN) Mohagheghi, E ; Alemzadeh, I ; Vossoughi, M ; Sharif University of Technology
    2008
    Abstract
    A batch extraction of an essential amino acid, phenylalanine, from an aqueous solution of different concentrations by an Emulsion Liquid Membrane (ELM) was developed using D2EHPA as a cationic carrier, Span 80 as the surfactant, paraffin, and kerosene as the diluents, and HCl as the internal electrolyte. All effective parameters such as the initial pH of the aqueous external phase, the electrolyte concentration in the aqueous internal phase, carrier, and surfactant concentration in the emulsion, the volume ratio of the organic to aqueous internal phase (Roi), the volume ratio of the W/O emulsion to the aqueous external phase (Rew) and time were examined and optimized using the Taguchi... 

    Bioconjugation of interferon-alpha molecules to lysine-capped gold nanoparticles for further drug delivery applications

    , Article Journal of Dispersion Science and Technology ; Volume 29, Issue 8 , 2008 , Pages 1062-1065 ; 01932691 (ISSN) Ghorbani Aghdam, A ; Vossoughi, M ; Almzadeh, I ; Zeinali, M ; Sharif University of Technology
    2008
    Abstract
    Gold nanoparticles are potentially very attractive components for therapeutic delivery since they can be synthesized with any diameter from 1 to 200 nm to carry a payload of therapeutic molecules into a cell without triggering an immune response. Gold nanoparticles must undergo surface transformations before coupling to therapeutic molecules to become eligible for this purpose. It is now more understood that amine groups can bind to gold nanoparticles strongly, which has enabled surface modification of gold nanoparticles with amino acid lysine through its amine group. These lysine capped gold nanoparticles can further be coupled to therapeutic molecules for delivery purposes. In this study... 

    Synthesis and investigation of swelling behavior of grafted alginate/alumina superabsorbent composite

    , Article Starch/Staerke ; Volume 60, Issue 9 , 9 September , 2008 , Pages 457-466 ; 00389056 (ISSN) Pourjavadi, A ; Farhadpour, B ; Seidi, F ; Sharif University of Technology
    2008
    Abstract
    In this study a novel alginate-g-poly(acrylic acid)/alumina composite was synthesized and characterized. Preparation of the composite hydrogels involved free radical polymerization of a combination of alginate, acrylic acid (AA) and distilled water, in appropriate amounts and N,N-methylene bisacrylamide (MBA) as crosslinking agent. The composite formation was confirmed by Fourier transform infrared spectroscopic (FTIR). The surface morphologies of the synthesized hydrogels were assessed by scanning electron microscopy. Systematically, the different variables of the graft copolymerization were optimized to achieve maximum swelling capacity. The swelling of superabsorbent hydrogels was... 

    Novel nanoporous superabsorbent hydrogel based on poly(acrylic acid) grafted onto salep: Synthesis and swelling behavior

    , Article Starch/Staerke ; Volume 60, Issue 9 , 9 September , 2008 , Pages 467-475 ; 00389056 (ISSN) Pourjavadi, A ; Soleyman, R ; Rezanejade Barajee, G ; Sharif University of Technology
    2008
    Abstract
    Hydrogels of poly(acrylic acid) grafted onto salep with excellent water absorption and water retention abilities under neutral conditions were successfully synthesized for the first time and employed for different applications. The effect of reaction variables to achieve maximum swelling capacity was investigated. In our procedure, ammonium persulfate (APS) as a water-soluble initiator and methylenebisacrylamide (MBA) as a suitable crosslinking agent were used and the best synthesis conditions described. The structure of the final product was confirmed by Fourier-transform infrared (FTIR) spectroscopy, scanning electron microscopy SEM and TGA analysis and a mechanism for superabsorbent... 

    Interaction of water-soluble amino acid Schiff base complexes with bovine serum albumin: Fluorescence and circular dichroism studies

    , Article Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy ; Volume 71, Issue 4 , 2008 , Pages 1617-1622 ; 13861425 (ISSN) Gharagozlou, M ; Mohammadi Boghaei, D ; Sharif University of Technology
    2008
    Abstract
    Fluorescence spectroscopy in combination with circular dichroism (CD) spectroscopy were used to investigate the interaction of water-soluble amino acid Schiff base complexes, [Zn(L1,2)(phen)] where phen is 1,10-phenanthroline and H2L1,2 is amino acid Schiff base ligands, with bovine serum albumin (BSA) under the physiological conditions in phosphate buffer solution adjusted to pH 7.0. The quenching mechanism of fluorescence was suggested as static quenching according to the Stern-Volmer equation. Quenching constants were determined using the Stern-Volmer equation to provide a measure of the binding affinity between amino acid Schiff base complexes and BSA. The thermodynamic parameters ΔG, ΔH... 

    Optimization of synthesis conditions of a novel carrageenan-based superabsorbent hydrogel by taguchi method and investigation of its metal ions adsorption

    , Article Journal of Applied Polymer Science ; Volume 107, Issue 5 , 2008 , Pages 2970-2976 ; 00218995 (ISSN) Pourjavadi, A ; Amini Fazl, M. S ; Barzegar, Sh ; Sharif University of Technology
    2008
    Abstract
    The Taguchi method, a robust experimental design, was used for optimization of synthesis of a novel biopolymer-based superabsorbent hydrogel, kappa-carrageenan (K-C)-g-acrylic acid (AA)-co-2-acrylamido-2- methylpropanesulfonic acid (AMPS). The Taguchi method was applied for the experimental and standard 18 orthogonal arrays (OA) with seven factors and three levels for each factor. In the synthesis of the superabsorbent, N,N'-methylene bisacrylamide (MBA) as crosslinker, ammonium persulfate (APS) as initiator, monomer ratio (AA/AMPS), K-C concentration, Total Monomer, neutralization percent (NU), and reaction temperature were used as important factors. After analyzing with analysis of... 

    Conversion of a weak organic acid to a super acid in the gas phase

    , Article Journal of Physical Organic Chemistry ; Volume 21, Issue 2 , 2008 , Pages 112-118 ; 08943230 (ISSN) Fattahi, A ; Tavasoli, E ; Sharif University of Technology
    2008
    Abstract
    The effects of selected metal ions on the gas-phase acidity of weak organic acids have been explored using the DFT and Moller-Plesset Perturbation Theory (MP2) calculations. The three organic acids selected for this study were acetic acid (aliphatic), benzoic acid (aromatic), and glycine (amino acid). The acidities of these compounds are compared with the acidity of their Li +-, Na+-, and K+ -complexed species. The results indicate that upon complexation with Li+, Na+, and K+ at 298K, the gas-phase acidity of acetic acid, for example, varies from 345.3 to 218.8, 230.2, and 240.1 kcal/mol, respectively (i.e., its dissociation becomes much less endothermic). These values indicate that a weak... 

    Solving haplotype reconstruction problem in MEC model with hybrid information fusion

    , Article EMS 2008, European Modelling Symposium, 2nd UKSim European Symposium on Computer Modelling and Simulation, Liverpool, 8 September 2008 through 10 September 2008 ; 2008 , Pages 214-218 ; 9780769533254 (ISBN) Asgarian, E ; Moeinzadeh, M. H ; Habibi, J ; Sharifian-R, S ; Rasooli-V, A ; Najafi-A, A ; Sharif University of Technology
    2008
    Abstract
    Single Nucleotide Polymorphisms (SNPs), a single DNA base varying from one individual to another, are believed to be the most frequent form responsible for genetic differences. Genotype is the conflated information of a pair of haplotypes on homologous chromosomes. Although haplotypes have more information for disease associating than individual SNPs and genotype, it is substantially more difficult to determine haplotypes through experiments. Hence, computational methods which can reduce the cost of determining haplotypes become attractive alternatives. MEC, as a standard model for haplotype reconstruction, is fed by fragments as input to infer the best pair of haplotypes with minimum error... 

    The first report on the catalytic oxidation of urazoles to their corresponding triazolinediones via in situ catalytic generation of Br+ using periodic acid or oxone®/KBr system

    , Article Journal of Molecular Catalysis A: Chemical ; Volume 270, Issue 1-2 , 2007 , Pages 219-224 ; 13811169 (ISSN) Zolfigol, M. A ; Bagherzadeh, M ; Mallakpour, S ; Chehardoli, G ; Ghorbani Choghamarani, A ; Koukabi, N ; Dehghanian, M ; Doroudgar, M ; Sharif University of Technology
    2007
    Abstract
    A combination of periodic acid or oxone® and a catalytic amount of KBr in the presence of few drops of water, were used for the catalytic oxidation of urazoles and bis-urazoles to their corresponding triazolinediones under mild and heterogeneous conditions with moderate to excellent yields. © 2007 Elsevier B.V. All rights reserved  

    Simultaneous voltammetric detection of ascorbic acid and uric acid at a carbon-paste modified electrode incorporating thionine-nafion ion-pair as an electron mediator

    , Article Electrochimica Acta ; Volume 51, Issue 13 , 2006 , Pages 2599-2606 ; 00134686 (ISSN) Shahrokhian, S ; Ghalkhani, M ; Sharif University of Technology
    2006
    Abstract
    The electrochemical behavior of ascorbic acid (AA) and uric acid (UA) at the surface of a carbon-paste electrode modified with incorporate thionine-nafion ion-paired was thoroughly investigated. The results show the presence of nafion inside the matrix of modified electrode, because of the effective ion-pairing and hydrophobic interactions, significantly enhances the stability of thionine as an electron mediator inside the modified electrode. A high reproducibility in voltammetric response to analyte species results because of this enhancement. The cyclic voltammetric studies using the prepared modified electrode show the best electrocatalytic property for the electro-oxidation of AA and...