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    Optimum Design, Simulation and Performance Evaluation of Animal PET System

    , M.Sc. Thesis Sharif University of Technology Ghahramani, Peyman (Author) ; Vosoughi, Naser (Supervisor) ; Ay, Mohammad Reza (Supervisor)
    Abstract
    PET systems are a kind of functional nuclear medicine instruments. In this systems a radionuclide is injected to body and output gamma rays is detected. PET can recognise cancer 10 times earlier than other imaging systems such as CT scan also the treatment plan can followed by PET. In the last two decades, the use of small-animal models in the field of biomedical research for studying disease have accelerated and dedicated small animal PET systems have started playing their role as strong imaging modalities in investigating cellular and molecular processes in live animals. Animal and human PETs have similar technology just human PET is bigger, so at this project, animal PET is designed for... 

    Implementation of Quantitative Analysis Capability on SPECT Images of HiReSPECT System

    , M.Sc. Thesis Sharif University of Technology Khorasani Gerdekoohi, Shabnam (Author) ; Vossoughi, Nasser (Supervisor) ; Ay, Mohammad Reza (Supervisor)
    Abstract
    Small animal SPECT imaging systems have a broad application in developing new diagnostic or therapeutic radiopharmaceutical and biomedical researches. The main goal of this imaging method is to determine distribution tendency and amount of radio pharmaceutics in body. In this study we have developed a reconstruction technique along with photon attenuation correction so as to obtain a high quality image and the finding a relationship between image matrix and absorbed radioisotope in tissues in order to quantify SPECT images with acceptable error range. In this research we have used MLEM method for image reconstruction and the obtained images were evaluated from quantitative and qualitative... 

    Dose Reduction Via Development of a Novel Image Reconstruction Method for Few-View Computed Tomography

    , Ph.D. Dissertation Sharif University of Technology Khodajou Chokami, Hamid Reza (Author) ; Hosseini, Abolfazl (Supervisor) ; Ay, Mohammad Reza (Supervisor)
    Abstract
    Sparse-view computed tomography (CT) is recently proposed as a promising method to speed up data acquisition and alleviate the issue of CT high-dose delivery to patients. However, traditional reconstruction algorithms are time-consuming and suffer from image degradation when faced with sparse-view data. To address this problem, we propose two new frameworks based on deep learning (DL) that can quickly produce high-quality CT images from sparsely sampled projections and is able for clinical use. Our first DL-based proposed model is based on the convolution, and residual neural networks in a parallel manner, named the parallel residual neural network (PARS-Net). Besides, our proposed PARS-Net... 

    MCNP-FBSM: Development of MCNP/MCNPX Source Model for Simulation of Multi-Slice Fan-Beam X-Ray CT Scanners

    , Article 2019 IEEE International Symposium on Medical Measurements and Applications, MeMeA 2019, 26 June 2019 through 28 June 2019 ; 2019 ; 9781538684276 (ISBN) Khodajou Chokami, H ; Hosseini, S. A ; Reza Ay, M ; Zaidi, H ; Sharif University of Technology
    Institute of Electrical and Electronics Engineers Inc  2019
    Abstract
    Computed tomography (CT) is one of the most valuable diagnostic imaging tools in the clinic and is widely used worldwide. One of the main motivations driving research and development in CT is to achieve better image quality while keeping the radiation dose to the patient as low as possible. In this regard, computer simulations play a key role in the optimization of CT design. In this work, a fan-beam source model (FBSM) for the simulation of multi-slice fan-beam CT scanners using the MCNP Monte Carlo code, has been developed and implemented. The use of this model removes the need for using the collimator in the system configuration and thus to overcome the perennial problem of particle... 

    Introducing of Novel Method to Improve the Process of Imaging in a Gamma Camera Equipped with Square PMTs

    , M.Sc. Thesis Sharif University of Technology Amir Mozafari Sabet, Kiarash (Author) ; Bagheri Shouraki, Saeed (Supervisor) ; Fatemizadeh, Emad (Supervisor) ; Ay, Mohammad Reza (Co-Supervisor)
    Abstract
    The gamma cameras, based on scintillation crystal followed by an array of photomultiplier tubes (PMTs), play a crucial role in nuclear medicine. The use of square PMTs provides the minimum dead zones in the camera. The camera with squared PMTs also reduces the number of PMTs relative to the detection area.In this thesis, we introduced a new read-out method whereby the total cost of the read-out board will be decreased by a factor of 2.4; in return, the energy and spatial resolution of the system will be reduced by 0.3% and 0.4% respectively. We also implemented a positioning module in the FPGA chip via that the transmission rate between FPGA and the computer will be tripled, and the... 

    A misbehavior‐tolerant multipath routing protocol for wireless Ad hoc networks [electronic resource]

    , Article International Journal of Research in Wireless Systems (IJRWS) ; Vol. 2, Issue 9, pp. , Sep. 2013 Sedghi, H. (Haniyeh) ; Pakravan, Mohammad Reza ; Aref, Mohammad Reza ; Sharif University of Technology
    Abstract
    Secure routing is a major key to service maintenance in ad hoc networks. Ad hoc nature exposes the network to several types of node misbehavior or attacks. As a result of the resource limitations in such networks nodes may have a tendency to behave selfishly. Selfish behavior can have drastic impacts on network performance. We have proposed a Misbehavior-Tolerant Multipath Routing protocol (MTMR) which detects and punishes all types of misbehavior such as selfish behavior, wormhole, sinkhole and grey-hole attacks. The protocol utilizes a proactive approach to enforce cooperation. In addition, it uses a novel data redirection method to mitigate the impact of node misbehavior on network... 

    A novel method for measuring the MTF of CT scanners: A phantom study

    , Article 2019 IEEE International Symposium on Medical Measurements and Applications, MeMeA 2019, 26 June 2019 through 28 June 2019 ; 2019 ; 9781538684276 (ISBN) Khodajou Chokami, H ; Hosseini, S. A ; Reza Ay, M ; Safarzadehamiri, A ; Ghafarian, P ; Zaidi, H ; Sharif University of Technology
    Institute of Electrical and Electronics Engineers Inc  2019
    Abstract
    The modulation transfer function (MTF) is well known as a crucial parameter in quality assurance of computed tomography (CT) scanners, which provides detailed information of both contrast and resolution of CT images. Different methods have been introduced and developed to calculate the MTF of CT scanners. However, a robust methodology which accurately estimates the MTF of CT scanners under the use of every range of object electron density and tube current-time product (mAs) has not been reported so far. To this aim, a new wavelet-based circular edge method for MTF measurement has been presented in this work. Owning to the edge spread function (ESF) susceptibility to noise, the approach was... 

    Analysis and Improvement of Intrusion Detection Methods in Data Network Routers

    , M.Sc. Thesis Sharif University of Technology Jamshidi, Mohammad Ali (Author) ; Aref, Mohammad Reza (Supervisor) ; Pakravan, Mohammad Reza (Co-Advisor)
    Abstract
    High-quality online services demand reliable and fast packet delivery at the network layer. However, clear evidence documents the existence of compromised routers in the ISP and enterprise networks, threatening network availability and reliability. A compromised router can stealthily drop, modify, inject, or delay packets in the forwarding path to launch Denial-of-Service, surveillance, man-in-the-middle attacks, etc. So researches tried to create intrusion detection methods to identify adversarial routers and switches. To this end, data-plane fault localization (FL) aims to identify faulty links and is an effective means of achieving high network availability. FL protocols use... 

    Topological Defects in Confined Nematics by Planar Anchoring

    , M.Sc. Thesis Sharif University of Technology Seyed Nejad, Reza (Author) ; Ejtehadi, Mohammad Reza (Supervisor) ; Mozaffari, Mohammad Reza (Supervisor)
    Abstract
    Confining nematic liquid crystal between two curved boundary conditions while the nematic molecules have a degenerate planar anchoring leads to complex and beautiful textures of molecular disparagement(defect) in the bulk and on the surfaces. Such the liquid crystal shells are made with double-emulsion techniques in microfluidic devices have provided applications for micro-scale colloidal linkers.In this work, we have numerically minimized the elastic energy in one-constant approximation in present of Fournier’s degenerate surface potential with finite element method. The nematic shell is confined between two spherical surfaces that we have studied the final energies and their related... 

    Improvement of Routing Security in Ad Hoc Networks Against Several Attacks

    , M.Sc. Thesis Sharif University of Technology Sedghi, Hanie (Author) ; Aref, Mohammad Reza (Supervisor) ; Pakravan, Mohammad Reza (Supervisor)
    Abstract
    Secure routing is a major key to service maintenance in wireless ad hoc networks. Ad hoc nature exposes the network to several types of node misbehavior or attacks. Wormhole attack is one of the most severe active attacks to mobile ad hoc networks. Noting the resource limitations in such networks, nodes may have a tendency to behave selfishly. Selfish behavior can have drastic impacts on network performance. We have proposed a Misbehavior-Tolerant Multipath Routing protocol (MTMR) which detects and punishes all types of misbehavior such as selfish behavior, wormhole, sinkhole and grey-hole attacks. The protocol utilizes a proactive approach to enforce cooperation. In addition, it uses a... 

    Solving Symmetric Nonlinear Equations System Using BFGS Trust Region Quadratic Method

    , M.Sc. Thesis Sharif University of Technology Salimi, Samira (Author) ; Razvan, Mohammad Reza (Supervisor) ; Peyghami, Mohammad Reza (Supervisor)

    Design and Implementation of 2.5 Gbps Circuit Switching Fabric

    , M.Sc. Thesis Sharif University of Technology Jahani, Sohrab (Author) ; Pakravan, Mohammad Reza (Supervisor) ; Movahhedy, Mohammad Reza (Supervisor)
    Abstract
    Providing high bandwidth network infrastructures for ever increasing need of data transport is of great importance. The underling infrastructure for many communication services such as GSM/3G/4G mobile networks and Internet services is Synchronous Digital Hierarchy (SDH) optical transport systems. SDH are standardized protocols that multiplex multiple lower rate digital bit streams, such as E1 and Ethernet, and transfer them synchronously over optical fiber using lasers or LEDs. In addition to high data transfer rates, flexible network management and protection mechanisms have great importance, hence are part of SDH standards. In order to obtain flexible network architecture and protected... 

    Preserving Privacy in Smart Grid

    , M.Sc. Thesis Sharif University of Technology Vahedi, Erfaneh (Author) ; Aref, Mohammad Reza (Supervisor) ; Pakravan, Mohammad Reza (Co-Advisor)
    Abstract
    Development of Smart Grid and deployment of smart meters in large scale has raised a lot of concerns regarding customers’ privacy. Consequently, several schemes have been proposed to overcome the above mentioned issue. These schemes mainly rely on data aggregation as a method of protecting users’ privacy from the grid operators. However, the main problem with most of these schemes is the fact that they require a large amount of processing power at the meter side. This, together with the fact that smart meters don’t usually have a powerful processor, can cause the unavailability of smart meter data at the required time for operators of the grid, and at the same time disables smart meters from... 

    Effect of the Geometry of Colloidal Particles on Nematic Liquid Crystals

    , Ph.D. Dissertation Sharif University of Technology Hashemi, Masoumeh (Author) ; Ejtehadi, Mohammad Reza (Supervisor) ; Mozaffari, Mohammad Reza (Co-Advisor)
    Abstract
    A liquid crystal is a state of matter composed of highly anisotropic building blocks. When liquid crystals are exposed to surfaces with given shapes and anchoring conditions, the orientation of their molecules gets spatially disordered and topological defects may form in the system. The interplay between liquid crystals and the geometry and topology of the colloidal particles has motivated extensive recent studies.In this thesis, we present the numerical modeling results for two faceted colloidal particles in a thermotropic nematic liquid crystal. To obtain the equilibrium nematic field with a finiteelement method, we numerically minimize the free energy of the system that based on the... 

    Solving Nonlinear Systems of Mixed Iqualities and Inequalities Via Trust Region Quadratic Methods

    , M.Sc. Thesis Sharif University of Technology Ghasemi, Shojaeddin (Author) ; Razvan, Mohammad Reza (Supervisor) ; Payghami, Mohammad Reza (Supervisor)

    Jamming Resilient Algorithms for Rendezvous in Cognitive Radio Networks

    , M.Sc. Thesis Sharif University of Technology Rezaei, Roohollah (Author) ; Aref, Mohammad Reza (Supervisor) ; Pakravan, Mohammad Reza (Co-Advisor)
    Abstract
    Dynamic spectrum access with the aid of cognitive radio (CR) technology is a viable solution to spectrum scarcity. There are many military and emergency applications that require the use of cognitive radio ad-hoc networks (CRAHNs). In these net- works, nodes must first find each other in a wide spectrum and then exchange their desired data. The process of finding each other in a multichannel environment is a challenging task and is usually known as rendezvous. Since rendezvous is the first step in communication, disrupting will disable the nodes from establishing proper communication sessions. That results in a drastic degrade in the performance of the network. Therefore, it is important to... 

    Numerical Study of Spray Impingement to Solid Wall

    , M.Sc. Thesis Sharif University of Technology Abbasi Chenari, Fatemeh (Author) ; Morad, Mohammad Reza (Supervisor) ; Jahannama, Mohammad Reza (Co-Supervisor)
    Abstract
    Spray-wall impingement is one of the phenomenon that associated in different subject such as spray cooling, combustion chamber and gas turbine. With the impingement of spray to the wall, liquid film begins to form. Wall film characteristics is still an important subject to study. Due to the various stages of liquid film formation from injection of spray till spray-wall impingement, the investigation of this phenomenon is far more complicated. This paper is meant to provide detailed data on spray-wall impingement and wall film formation physics with the help of computational analysis of OpenFOAM . A Lagrangian-Eulerian method based on discrete phase model (DPM) was employed to model... 

    Assessing and Improving Algorithms to Control the Propagation of Light through Scattering Media

    , M.Sc. Thesis Sharif University of Technology Fayyaz, Zahra (Author) ; Rahimitabar, Mohammad Reza (Supervisor) ; Nasiriavanaki, Mohammad Reza (Supervisor)
    Abstract
    Light propagation through turbid media, such as biological tissues, experience scattering due to inhomogeneous distribution of refractive indices of their microscopic structure. Scattering and diffusion of light not only limit many optical imaging techniques, but are also big challenges for telecommunication, spectroscopy, and other optical techniques. Recently many new imaging methods are developed that work in strongly scattering media such as optical coherence tomography, diffusion tomography, and laser speckle velocimetry. In this thesis, we have studied how wavefront shaping techniques can tackle the problem of scattering. By spatially shaping the wavefront of the incident beam, using... 

    Investigations on the Effect of Biosurfactants on the Wettability of Carbonate Rocks via Interactions with Rock and Fluid in Ex-Sito MEOR

    , Ph.D. Dissertation Sharif University of Technology Adelzadeh, Mohammad Reza (Author) ; Roosta Azad, Reza (Supervisor) ; Kamali, Mohammad Reza (Supervisor) ; Shadizadeh, Reza (Co-Advisor)
    Abstract
    The effects of biosurfactants on sandstone rocks are known in the literature. However, there are few examples of experimental works in Iranian carbonate reservoirs dealing with the effects of biosurfactants under reservoir conditions. This thesis discusses the effect of an efficient biosurfactant produced from Pseudomonas aeroginosa MRo1, a bacterial strain isolated from oil excavation areas in southern Iran, on the recovery of residual oil trapped within carbonate rocks was investigated. The MRO1 could reduce surface tension from 72 to 28 dyne/cm. It also could reduce Interfacial tension from 18.382 to 5.646 dyne/cm.
    In a core holder set-up bearing four limestone- and... 

    Photocatalytic mechanism of action of apatite-coated Ag=AgBr=TiO 2 on phenol and Escherichia coli and Bacillus subtilis bacteria under various conditions

    , Article Progress in Reaction Kinetics and Mechanism ; Vol. 1 , Vol.36 (1) , 2011 , pp.38-52 Elahifard, M. R. (Mohammad Reza) ; Gholami, M. R. (Mohammad Reza) ; Rahimnejad, S. (Sara) ; Pourbaba, R. (Reza) ; Haghighi, S.(Saeed) ; Sharif University Of Technology
    2011
    Abstract
    Multi-component photocatalysts based on apatite-coated Ag/AgBr/TiO(2) were prepared by the deposition method. The effects of various kinds of apatites, with hydroxyl and fluoro substituents, on photocatalytic activity were investigated. The antibacterial processes in the dark, and under visible light, on two types of bacteria indicate that the multi-composites can inhibit the growth of bacteria by two different mechanisms. TEM images and optical microscopic data demonstrate that by attaching the nanosize catalyst to the outer membrane of the cell, the bacteria could not derive nourishment from surrounding media, i.e. this component acts as bacteria-static. The mechanism for deactivation of...