Sharif Digital Repository

To help overcome limits to the density of conventional SRAMs and leakage current of SRAM cell in nanoscaled CMOS technology, we have developed a four-transistor SRAM cell. The newly developed CMOS four-transistor SRAM cell uses one word-line and one bit-line during read/write operation. This cell retains its data with leakage current and positive feedback without refresh cycle. The new cell size is 19% smaller than a conventional six-transistor cell using same design rules. Also the leakage current of new cell is 60% smaller than a conventional sixtransistor SRAM cell. Simulation result in 65nm CMOS technology shows new cell has correct operation during read/write operation and idle mode  

The constraints of power saving have compelled SRAM designers to consider sub-threshold area as a viable choice. The biggest barrier of this progress is the stability of SRAM's cells and the correct operations. In this paper a 10T cell structure has been proposed with 90% read and 50% write SNM improvement in comparison to the conventional 6T cell. The hold SNM value is about the 6T cell SRAM. Also using differential read method in the proposed structure causes high read performance and using simpler sense amplifier. The symmetric configuration of this structure helps the SRAM has simpler layout and lower transistor mismatch. Using 90nm TSMC CMOS, 32kb 10T cell SRAM in sub-threshold area is... 

The potential for using Thermophotovoltaic (1TPV) generators as an alternative for recovering energy losses in steel production industry is assessed. A mathematical model for the assessment of the performance of TPV application in the iron and steel industry has been developed. In order to support the mathematical model, a sample TPV apparatus in laboratory scale based on an IR emitter has been designed and assembled. The key modeling parameters of TPV generator include: the open circuit voltage, the short circuit current density and fill factor of the TPV cell. These parameters have been considered in the model as functions of several variables such as: the emitter (hot steel slab)... 

In the present study, a theoretical model of a reaction–diffusion within an entrapped-cell photobioreactor packed with gel-granules containing immobilized photosynthetic bacterial cells is presented. The model is based on a system of two coupled nonlinear reaction–diffusion equations under steady-state condition for biochemical reactions occurring in the photobioreactor that describes the substrate and product concentration within the gel-granule. Simple analytical expressions for the concentration of substrate and product have been derived for all values of reaction–diffusion parameters, demonstrating competition between the diffusion and reaction in the gel-granule, using the homotopy... 

In the present study, the applicability and accuracy of a cell-vertex finite volume method developed are assessed in simulating 2D fluid–structure interaction in inviscid compressible flows where the nonlinear phenomena exist in both the unsteady transonic fluid flows and the large nonlinear deformation of solid structures. The unsteady Euler equations are considered as the governing equations of the fluid flow in the arbitrary Lagrangian–Eulerian form and the large nonlinear deformation of the solid structure is considered to be governed by the Cauchy equations in the total Lagrangian form. Both the domains are discretized by a second-order central-difference cell-vertex finite volume... 

Background and objective There are many cells with various phenotypic behaviors in cancer interacting with each other. For example, an apoptotic cell may induce apoptosis in adjacent cells. A living cell can also protect cells from undergoing apoptosis and necrosis. These survival and death signals are propagated through interaction pathways between adjacent cells called gap junctions. The function of these signals depends on the cellular context of the cell receiving them. For instance, a receiver cell experiencing a low level of oxygen may interpret a received survival signal as an apoptosis signal. In this study, we examine the effect of these signals on tumor growth. Methods We make an... 

The formation of biomimetic bone-like apatite layers throughout the biopolymer-based hydrogel scaffold is an attractive approach in bone tissue engineering. Here, the starch scaffold was prepared using a combination of particulate leaching and freeze-drying techniques. The fabricated structures were then modified by citric acid to investigate the formation of bone-like apatite layer on the porous citrate-based scaffold after soaking in simulated body fluid (SBF). The Fourier Transform Infrared (FTIR) spectra and X-ray diffraction (XRD) patterns revealed that the B-type carbonated apatite has successfully deposited on the scaffold after immersing in SBF for 28 days. Indeed, high chemical... 

The shape and morphology of endothelial cells (ECs) lining the blood vessels are a good indicator for atheroprone and atheroprotected sites. ECs of blood vessels experience both wall shear stress (WSS) and cyclic stretch (CS). These mechanical stimuli influence the shape and morphology of ECs. A few models have been proposed for predicting the morphology of ECs under WSS or CS. In the present study, a mathematical cell population model is developed to simulate the morphology of ECs under combined WSS and CS conditions. The model considers the cytoskeletal filaments, cell–cell interactions, and cell–extracellular matrix interactions. In addition, the reorientation and polymerization of... 

Graphene/cobalt nanocomposites are promising materials for theranostic nanomedicine applications, which are defined as the ability to diagnose, provide targeted therapy and monitor the response to the therapy. In this study, the composites were synthesized via chemical method, using graphene oxide as the source material and assembling cobalt nanoparticles of 15 nm over the surface of graphene sheets. Various characterization techniques were then employed to reveal the morphology, size and structure of the nanocomposites, such as X-ray diffraction analysis, X-ray photoelectron spectroscopy, Fourier transform infrared spectroscopy, high resolution transmission electron microscopy and... 

The advent of microfluidics as suitable environments for culturing cells is associated with some challenges as shear stresses applied on the cells. Moreover, among all factors needed for cell viability, feeding hepatocytes with adequate oxygen is of great importance due to their high demand for oxygen compared the other cell types. In this paper three kinds of geometries has been studied in order that shear stresses would be in allowed range and provision of hepatocytes with sufficient oxygen concentrations has been ensured as well. In addition to supplying hepatocytes with oxygen, the range of its concentration has been adjusted in physiologic value so that it would be practical for further... 

The objective of this study is to design a novel and efficient portable lab-on-a-CD (LOCD) microfluidic device for separation of specific cells (target cells) using magnetic beads. In this study the results are shown for neutrophils as target cells. However, other kinds of target cells can be separated in a similar approach. The designed microfluidics can be utilized as a point of care system for neutrophil detection. This microfluidic system employs centrifugal and magnetic forces for separation. After model validation by the experimental data in the literature (that may be used as a design tool for developing centrifugo-magnetophoretic devices), two models are presented for separation of... 

Cell dynamics and motion stages are very important issues in the biological cell investigation in this novel method, we propose a novel method based on Kalman filter and second momentum for tracking cells on Sequential Microscopic Images. In proposed manner at first, we select a cell and cut covering rectangle. in the next step, we predict rectangle center of the cell in Next frame based on a modeling of velocity-acceleration using Kalman filter. The rectangle with triple covering area of previous cell rectangle and predicting center by Kalman filter is considered as a searching area. So, if all objects in the search areas have second momentum error less than threshold, it is selected as a... 

It is important to distinguish overlapped cell for tracking and segmentation biological cells from images. In this research, a novel or comprehensive method is provided with morphological features of cell and minimum distance for overlapped cells separation (OCS). it's necessary to say that this algorithm is not based on type and number of Overlapped cells. In this presented method based on a distance chart. At first, every cell or rectangle of cell is separated of the original image. Also, multiplex cell is distinguished by using minimum perimeter polygon (MPP) method. Distance chart is achieved on the base of morphological procedure and Computing of cell boundary distance to Cell middle... 

Graphene oxide foam (GOF) layers with thicknesses of ∼15-50 μm and density of ∼10 graphene oxide (GO) sheets/μm were fabricated by precipitation of chemically exfoliated GO sheets in an aqueous suspension at ∼80 °C under UV irradiation. Then, rolled GOFs with desirable scales were developed as electrically conductive 3D-scaffolds and applied in directional growth of neural fibers, through differentiation of human neural stem cells (hNSCs) into neurons under an electrical stimulation. X-ray photoelectron spectroscopy indicated that the UV irradiation resulted in partial deoxygenation of the layers. Scanning electron microscopy and Raman spectroscopy confirmed the presence of multilayer GO... 

Microbial electrolysis cells (MECs) are bioelectrochemical reactors in which chemical energy stored in organic compounds are converted to hydrogen through biocatalytic oxidation by microorganisms. The performance of MECs is highly affected by microbial communities that are impartible parts of this technology. A better understanding of microbial interactions and competitions mechanisms, has aided the comprehension of ideas and guidelines for cost effective commercial scales design. In this study, a comprehensive review of current knowledge in the microbial characterization, enrichment, and evaluation of effective parameters of microbial community in microbial electrolysis cells for typical... 

Protein aggregation in cell membrane is vital for the majority of biological functions. Recent experimental results suggest that transmembrane domains of proteins such as α-helices and β-sheets have different structural rigidities. We use molecular dynamics simulation of a coarse-grained model of protein-embedded lipid membranes to investigate the mechanisms of protein clustering. For a variety of protein concentrations, our simulations under thermal equilibrium conditions reveal that the structural rigidity of transmembrane domains dramatically affects interactions and changes the shape of the cluster. We have observed stable large aggregates even in the absence of hydrophobic mismatch,... 

The function and morphology of Endothelial Cells (ECs) play a key role in atherosclerosis. The mechanical stimuli of ECs, such as Wall Shear Stress (WSS) and arterial wall strain, greatly inuence the function and morphology of these cells. The present article deals with computations of these stimuli for a 3D model of a healthy coronary artery bifurcation. The focus of the study is to propose an accurate method for computations of WSS and strains. Two approaches are considered: Coupled simultaneous simulation of arterial wall and blood flow, called fluid-Structure Interaction (FSI) simulation, and decoupled, which simulates each domain (fluid and solid domain) separately. The study... 

A cell migration numerical simulation is presented to mimic the motility of endothelial cells subjected to the concentration gradients of a Forebrain embryoniccortical neuron Conditioned Medium (CM). This factor was previously shflown to induce the directional chemotaxis of endothelial cells with an over-expressed G protein coupled receptor 124 (GPR 124). A cell simulator program incorporates basic elements of the cell cytoskeleton, including membrane, nucleus and cytoskeleton. The developed 2D cell model is capable of responding to concentration gradients of biochemical factors by changing the cytoskeleton arrangement. Random walk force, cell drag force and cell inertial effects are also... 

Although graphene/stem cell-based tissue engineering has recently emerged and has promisingly and progressively been utilized for developing one of the most effective regenerative nanomedicines, it suffers from low differentiation efficiency, low hybridization after transplantation and lack of appropriate scaffolds required in implantations without any degrading in functionality of the cells. In fact, recent studies have demonstrated that the unique properties of graphene can successfully resolve all of these challenges. Among various stem cells, neural stem cells (NSCs) and their neural differentiation on graphene have attracted a lot of interest, because graphene-based neuronal tissue... 

The present study demonstrates HEMA-grafted nanodiamond (ND-HEMA)/acrylate-terminated polyurethane-acrylate diluents (APUA) composites as promising materials for bone implant applications. Neat APUA and APUA composites containing ND-HEMA at different loadings up to 2 wt% were prepared by an in situ polymerization method. Morphological analysis demonstrated that ND-HEMAs were actually in the form of tightly bound aggregates which led to formation of big agglomerates at a concentration of 2 wt%. It was also suggested that ND-HEMAs were preferentially localized in the continuous soft domain of APUA; however it interacted by both soft and hard domains. Moreover, ND-HEMAs caused considerable...