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    Controlling the microscale separation of immiscible liquids using geometry: A computational fluid dynamics study

    , Article Chemical Engineering Science ; Volume 220 , 2020 Kamrani, S ; Mohammadi, A ; Sharif University of Technology
    Elsevier Ltd  2020
    Abstract
    In this study, we numerically determined the performance of a microscale separator comprising a lateral and a main channel to separate a two-phase flow. It was aimed to conduct continuous phase through the lateral channel and dispersed phase through the main channel. The continuous and dispersed phases were modeled as incompressible Newtonian fluids with the corresponding interface tracked by the phase-field model. The dynamics, including pressure fluctuations in the separator, were further examined. It was mechanistically demonstrated how the geometry of the separator modulates the phase separation. Further examined were the influences of various geometrical parameters on the performance of... 

    Kinetics of swelling of cylindrical temperature-responsive hydrogel: a semi-analytical study

    , Article International Journal of Applied Mechanics ; Volume 12, Issue 8 , 2020 Namdar, A. H ; Mazaheri, H ; Sharif University of Technology
    World Scientific  2020
    Abstract
    Cylindrical hydrogels have a wide variety of applications, especially in microfluidics as micro-valves, micro-mixers, and micro-lenses. Main advantages of them can be mentioned as their simple geometry and autonomous functionality due to their responses to the environmental stimuli. In current research, kinetics of swelling, shrinking and force generation of cylindrical temperature-responsive hydrogels have been investigated analytically. According to this, models of fluid permeation and large deformation of the hydrogels were considered and an analytical solution was performed. In order to study the behavior of the cylindrical hydrogels, the temperature is changed between higher and lower... 

    Design and simulation of an integrated centrifugal microfluidic device for CTCs separation and cell lysis

    , Article Micromachines ; Volume 11, Issue 7 , July , 2020 Nasiri, R ; Shamloo, A ; Akbari, J ; Tebon, P ; Dokmeci, M. R ; Ahadian, S ; Sharif University of Technology
    MDPI AG  2020
    Abstract
    Separation of circulating tumor cells (CTCs) from blood samples and subsequent DNA extraction from these cells play a crucial role in cancer research and drug discovery. Microfluidics is a versatile technology that has been applied to create niche solutions to biomedical applications, such as cell separation and mixing, droplet generation, bioprinting, and organs on a chip. Centrifugal microfluidic biochips created on compact disks show great potential in processing biological samples for point of care diagnostics. This study investigates the design and numerical simulation of an integrated microfluidic device, including a cell separation unit for isolating CTCs from a blood sample and a... 

    Microfluidic-based approaches in targeted cell/particle separation based on physical properties: fundamentals and applications

    , Article Small ; Volume 16, Issue 29 , 2020 Nasiri, R ; Shamloo, A ; Ahadian, S ; Amirifar, L ; Akbari, J ; Goudie, M. J ; Lee, K ; Ashammakhi, N ; Dokmeci, M. R ; Di Carlo, D ; Khademhosseini, A ; Sharif University of Technology
    Wiley-VCH Verlag  2020
    Abstract
    Cell separation is a key step in many biomedical research areas including biotechnology, cancer research, regenerative medicine, and drug discovery. While conventional cell sorting approaches have led to high-efficiency sorting by exploiting the cell's specific properties, microfluidics has shown great promise in cell separation by exploiting different physical principles and using different properties of the cells. In particular, label-free cell separation techniques are highly recommended to minimize cell damage and avoid costly and labor-intensive steps of labeling molecular signatures of cells. In general, microfluidic-based cell sorting approaches can separate cells using “intrinsic”... 

    Fluidic barriers in droplet-based centrifugal microfluidics: Generation of multiple emulsions and microspheres

    , Article Sensors and Actuators, B: Chemical ; Volume 311 , May , 2020 Madadelahi, M ; Madou, M. J ; Dorri Nokoorani, Y ; Shamloo, A ; Martinez Chapa, S. O ; Sharif University of Technology
    Elsevier B. V  2020
    Abstract
    Droplet generation is very important in biochemical processes such as cell encapsulation, digital PCR (Polymerase Chain Reaction), and drug delivery. In the present paper, a density-based method called “fluidic barrier” is introduced to produce multiple emulsions on a centrifugal microfluidic platform or Lab-on-a-CD (LOCD). We show that the density and the viscosity of the fluids involved are important parameters for predicting the characteristics of the droplets generated with this method. Moreover, we broadened this concept by using the fluidic barriers to separate reactive chemicals. As a proof of concept, alginate and CaCl2 solutions are separated by an oil barrier to control the... 

    Improvement of size-based particle separation throughput in slanted spiral microchannel by modifying outlet geometry

    , Article Electrophoresis ; Volume 41, Issue 5-6 , February , 2020 , Pages 353-359 Mihandoust, A ; Maleki Jirsaraei, N ; Rouhani, S ; Safi, S ; Alizadeh, M ; Sharif University of Technology
    Wiley-VCH Verlag  2020
    Abstract
    The inertial microfluidic technique, as a powerful new tool for accurate cell/particle separation based on the hydrodynamic phenomenon, has drawn considerable interest in recent years. Despite numerous microfluidic techniques of particle separation, there are few articles in the literature on separation techniques addressing external outlet geometry to increase the throughput efficiency and purity. In this work, we report on a spiral inertial microfluidic device with high efficiency (>98%). Herein, we demonstrate how changing the outlet geometry can improve the particle separation throughput. We present a complete separation of 4 and 6 μm from 10 μm particles potentially applicable to... 

    Computational inertial microfluidics: a review

    , Article Lab on a Chip ; Volume 20, Issue 6 , 2020 , Pages 1023-1048 Razavi Bazaz, S ; Mashhadian, A ; Ehsani, A ; Saha, S. C ; Krüger, T ; Ebrahimi Warkiani, M ; Sharif University of Technology
    Royal Society of Chemistry  2020
    Abstract
    Since the discovery of inertial focusing in 1961, numerous theories have been put forward to explain the migration of particles in inertial flows, but a complete understanding is still lacking. Recently, computational approaches have been utilized to obtain better insights into the underlying physics. In particular, fundamental aspects of particle focusing inside straight and curved microchannels have been explored in detail to determine the dependence of focusing behavior on particle size, channel shape, and flow Reynolds number. In this review, we differentiate between the models developed for inertial particle motion on the basis of whether they are semi-analytical, Navier-Stokes-based,... 

    Numerical investigation on the effect of external varying magnetic field on the mixing of ferrofluid with deionized water inside a microchannel for lab-on-chip systems

    , Article Energy Sources, Part A: Recovery, Utilization and Environmental Effects ; 2020 Saadat, M ; Ghassemi, M ; Shafii, M. B ; Sharif University of Technology
    Taylor and Francis Inc  2020
    Abstract
    Energy-efficient mixing is vital for chemical and fuel processes. To this end, a flow-focusing configuration is proposed to investigate the effect of a uniform magnetic field on the mixing of a water-based ferrofluid with two streams of deionized water. An external and varying magnetic field is imposed on a straight microchannel, and the mixing between the ferrofluid and deionized waters is qualitatively and quantitatively measured. A commercial code based on the finite-element method is used, and the simulations are validated by two experimental studies in the literature. For a magnetic flux density of 10 mT, a signal frequency of 1 Hz, a duty cycle of 0.3, an inlet velocity of 500 µm/s,... 

    Numerical investigation on mixing intensification of ferrofluid and deionized water inside a microchannel using magnetic actuation generated by embedded microcoils for lab-on-chip systems

    , Article Chemical Engineering and Processing - Process Intensification ; Volume 147 , 2020 Saadat, M ; Shafii, M. B ; Ghassemi, M ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Effective and rapid mixing is crucial for chemical and biological processes. The purpose of the current study is to investigate the effect of steady and varying magnetic field on the mixing of a water-based ferrofluid and two streams of deionized water inside a microchannel for Lab-on-Chip applications. To this end, the nonlinear governing equations, the momentum equation, the continuity equation, the mass transport equation and the Maxwell-Ampere equations are numerically solved. A commercial code based on the finite-element method is used and the numerical simulations are validated by the experimental results in the literature. To augment the mixing performance, the effects of influencing... 

    Parametric study of droplet formation and characteristics within microfluidic devices - A case study

    , Article International Journal of Applied Mechanics ; Volume 12, Issue 7 , 2020 Salehi, S. S ; Shamloo, A ; Kazemzadeh Hannani, S ; Sharif University of Technology
    World Scientific  2020
    Abstract
    Droplet-based microfluidics technologies hold great attention in a wide range of applications, including chemical analysis, drug screening, and food industries. This work aimed to describe the effects of different physical properties of the two immiscible phases on droplet formation in a flow-focusing microfluidic device and determining proper flow rates to form a droplet within the desired size range. A numerical model was developed to solve the governing equations of two-phase flow and the results were validated with previous experimental results. The results demonstrate different types of droplet formation regimes from dripping to jetting and different production rates of droplets as a... 

    Microfluidic technologies to engineer mesenchymal stem cell aggregates—applications and benefits

    , Article Biophysical Reviews ; Volume 12, Issue 1 , 2020 , Pages 123-133 Salehi, S. S ; Shamloo, A ; Kazemzadeh Hannani, S. K ; Sharif University of Technology
    Springer  2020
    Abstract
    Three-dimensional cell culture and the forming multicellular aggregates are superior over traditional monolayer approaches due to better mimicking of in vivo conditions and hence functions of a tissue. A considerable amount of attention has been devoted to devising efficient methods for the rapid formation of uniform-sized multicellular aggregates. Microfluidic technology describes a platform of techniques comprising microchannels to manipulate the small number of reagents with unique properties and capabilities suitable for biological studies. The focus of this review is to highlight recent studies of using microfluidics, especially droplet-based types for the formation, culture, and... 

    Investigation of a two-step device implementing magnetophoresis and dielectrophoresis for separation of circulating tumor cells from blood cells

    , Article Engineering in Life Sciences ; Volume 20, Issue 7 , 2020 , Pages 296-304 Shamloo, A ; Yazdani, A ; Saghafifar, F ; Sharif University of Technology
    Wiley-VCH Verlag  2020
    Abstract
    Identifying tumor cells from a pool of other cells has always been an appealing topic for different purposes. The objective of this study is to discriminate circulating tumor cells (CTCs) from blood cells for diagnostic purposes in a novel microfluidic device using two active methods: magnetophoresis and dielectrophoresis. The most specific feature of this device is the differentiation of CTCs without labeling them in order to achieve a more reliable and less complicated method. This device was analyzed and evaluated using finite element method. Four cell lines are separated in this device containing red blood cells, platelets, white blood cells, and CTCs. Primarily, red blood cells and... 

    Investigating the effect of reagent parameters on the efficiency of cell lysis within droplets

    , Article Physics of Fluids ; Volume 32, Issue 6 , 2020 Shamloo, A ; Hassani Gangaraj, M ; Sharif University of Technology
    American Institute of Physics Inc  2020
    Abstract
    Cell lysis is an essential primary step in cell assays. In the process of cell lysis, the cell membrane is destroyed and the substances inside the cell are extracted. By utilizing a droplet-based microfluidic platform for cell lysis, the mixer unit that is required for mixing lysis reagents with the cells can be excluded, and thus, the complexity of the fabrication process is reduced. In addition, lysing the cells within the droplets will prevent the cells from exposure to the channel walls, and as a result, cleanliness of the samples and the device is maintained. In this study, cell lysis within the droplets and the parameters affecting the efficiency of this process are investigated using... 

    Investigation of a Novel Microfluidic Device for Label-Free Ferrohydrodynamic Cell Separation on a Rotating Disk

    , Article IEEE Transactions on Biomedical Engineering ; Volume 67, Issue 2 , 2020 , Pages 372-378 Shamloo, A ; Besanjideh, M ; Sharif University of Technology
    IEEE Computer Society  2020
    Abstract
    Negative magnetophoresis is a novel and attractive method for continuous microparticle sorting inside a magnetic medium. In this method, diamagnetic particles are sorted based on their sizes using magnetic buoyancy force and without any labeling process. Although this method provides some attractive features, such as low-cost fabrication and ease of operation, there are some obstacles that adversely affect its performance, especially for biological applications. Most types of magnetic media, such as ferrofluids, are not biocompatible, and the time-consuming process of sample preparation can be threatening to the viability of the cells within the sample. Furthermore, in this method, both the... 

    Pore scale visualization of fluid-fluid and rock-fluid interactions during low-salinity waterflooding in carbonate and sandstone representing micromodels

    , Article Journal of Petroleum Science and Engineering ; 2020 Siadatifar, S. E ; Fatemi, M ; Masihi, M ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Low Salinity Waterflooding (LSWF) has become a popular tertiary injection EOR method recently. Both fluid-fluid and fluid-rock interactions are suggested as the contributing mechanisms on the effectiveness of LSWF. Considering the contradictory remarks in the literature, the dominating mechanisms and necessary conditions for Low Salinity Effect (LSE) varies for different crude oil-brine-rock (CBR) systems. The aim of the present study is to investigate LSE for an oil field in the Middle East that is composed of separate sandstone and limestone layers. Contact angles and Interfacial Tension (IFT) are measured to have more insight on the CBR under investigation. Visual experiments were... 

    Simple, Cost-effective, and continuous 3D dielectrophoretic microchip for concentration and separation of bioparticles

    , Article Industrial and Engineering Chemistry Research ; Volume 59, Issue 9 , 2020 , Pages 3772-3783 Tajik, P ; Saidi, M. S ; Kashaninejad, N ; Nguyen, N. T ; Sharif University of Technology
    American Chemical Society  2020
    Abstract
    Dielectrophoresis is a robust approach for manipulating bioparticles in microfluidic devices. In recent years, many groups have developed dielectrophoresis-based microfluidic systems for separation and concentration of various types of bioparticles, where the gradient of the electric field causes dielectrophoresis force acting on the suspended particles. Enhancing the gradient of the electric field with three-dimensional (3D) electrodes can significantly improve the efficiency of the system. Implementing planar electrodes in a 3D arrangement is a simple option to form a 3D-electrode configuration. This paper reports the development of a novel dielectrophoretic microfluidic system for... 

    Enzymatic outside-in cross-linking enables single-step microcapsule production for high-throughput three-dimensional cell microaggregate formation

    , Article Materials Today Bio ; Volume 6 , 2020 Van Loo, B ; Salehi, S. S ; Henke, S ; Shamloo, A ; Kamperman, T ; Karperien, M ; Leijten, J ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    Cell-laden hydrogel microcapsules enable the high-throughput production of cell aggregates, which are relevant for three-dimensional tissue engineering and drug screening applications. However, current microcapsule production strategies are limited by their throughput, multistep protocols, and limited amount of compatible biomaterials. We here present a single-step process for the controlled microfluidic production of single-core microcapsules using enzymatic outside-in cross-linking of tyramine-conjugated polymers. It was hypothesized that a physically, instead of the conventionally explored biochemically, controlled enzymatic cross-linking process would improve the reproducibility,... 

    An interface–particle interaction approach for evaluation of the co-encapsulation efficiency of cells in a flow-focusing droplet generator

    , Article Sensors (Switzerland) ; Volume 20, Issue 13 , 2020 , Pages 1-17 Yaghoobi, M ; Saidi, M. S ; Ghadami, S ; Kashaninejad, N ; Sharif University of Technology
    MDPI AG  2020
    Abstract
    Droplet-based microfluidics offers significant advantages, such as high throughput and scalability, making platforms based on this technology ideal candidates for point-of-care (POC) testing and clinical diagnosis. However, the efficiency of co-encapsulation in droplets is suboptimal, limiting the applicability of such platforms for the biosensing applications. The homogeneity of the bioanalytes in the droplets is an unsolved problem. While there is extensive literature on the experimental setups and active methods used to increase the efficiency of such platforms, passive techniques have received less attention, and their fundamentals have not been fully explored. Here, we develop a novel... 

    Immobilization of synthesized phenyl-enriched magnetic nanoparticles in a fabricated Y–Y shaped micro-channel containing microscaled hedges as a microextraction platform

    , Article Analytica Chimica Acta ; Volume 1136 , 2020 , Pages 51-61 Rezvani, O ; Hedeshi, M. H ; Bagheri, H ; Sharif University of Technology
    Elsevier B.V  2020
    Abstract
    In this survey, a reliable and applicable Y–Y shaped micro–channel in a microfluidic device was designed and manufactured. A number of micro–scaled hedges were precisely fabricated inside the micro–channel to facilitate the immobilization of synthesized core–shell Fe3O4@SiO2 magnetic nanoparticles (MNPs), functionalized by triethoxyphenylsilane (TEPS) by sol-gel technique. Both sample and reagents were introduced into the microfluidic device by a syringe pump to perform the extraction and desorption steps. The functionalized MNPs were characterized by transmission electron microscopy, X-ray diffraction spectroscopy and Fourier transform infrared spectroscopy. By adopting the strategy of... 

    A microfluidic concentration gradient generator for simultaneous delivery of two reagents on a millimeter-sized sample

    , Article Journal of Flow Chemistry ; Volume 10, Issue 4 , 2020 , Pages 615-625 Rismanian, M ; Saidi, M. S ; Kashaninejad, N ; Sharif University of Technology
    Springer International Publishing  2020
    Abstract
    Microfluidic concentration gradient generators (μCGGs) are indispensable parts of many emerging lab-on-a-chip platforms for biological studies and drug delivery applications. Most of the μCGGs reported in the literature can only generate the desired concentration gradients in a micron-sized sample (e.g., cells). As such, there is an unmet need to design a μCGG that can generate continuous concentration gradients of multi reagents (e.g., drugs) in a millimeter-sized sample (e.g., tissue). Herein, we report the proof-of-concept of this class of μCGG by combining a modified tree-like CGG with a micromixer. By conducting both experimental investigation and numerical analysis, we show that the...