Sharif Digital Repository

In this study, a simple route to the formation of DNA-gold complex has been reported, using immobilized DNA as a template. The nanoporous gold films have been prepared by the electrostatic self assembly of gold nanoparticles capped with tryptophan. Tryptophan would improve surface properties of gold nanoparticles for strongly attaching to DNA. Fourier transform infrared spectroscopy confirmed that gold nanoparticles have been capped by tryptophan. Also measured zeta potential shows that there are positive charges on the surface of gold nanoparticles. Investigations by atomic force microscopy substantially confirm that tryptophan-capped gold nanoparticles can be bonded to DNA template... 

In this study, synthesis of conductive metal nanowires by using aligned and immobilised DNA strand on solid substrate is reported. The nanoporous gold film was prepared by electrostatic self assembly of gold nanoparticles capped with tryptophan. Tryptophan would improve surface properties of gold nanoparticles for strongly attaching to DNA. Fourier transform infrared (FTIR) spectroscopy confirmed that gold nanoparticles have been capped by tryptophan. Also measured zeta potential shows that there are positive charges on the surface of gold nanoparticles. Investigations by AFM observati on substantially confirm that tryptophan-capped gold nanoparticles can be bonded to DNA template... 

Water desalination methods on the basis of newly developed graphene-based membrane have been introduced as a more efficient alternative for the conventional water purification technologies such as classical thermal desalination and reverse osmosis (RO). However, the increase of water permeation rate and ion rejection are still the main subjects in this field. In this study, a new method based on using oscillating electric field is proposed to improve the performance of nanoporous graphene. The effects of the amplitude and oscillation frequency of the electric field and the pore size of the membrane on the water permeation and salt rejection are studied by conducting molecular dynamics... 

In this research, we investigate the effect of alkali metal cations including Li, Na and Cs in hydrothermal solution on the morphology, stability, and photoactivity of nanostructured TiO2 nanoflakes as a photoanode. The TiO2 nanoflakes are formed through hydrothermal treatment of Ti foil in 1.0 M LiOH, NaOH or CsOH at 100 °C for 3 h. By subsequent thermal reduction of the structure in an optimized Ar/H2 environment, conductive TiO2 nanoflakes were formed. The reduction treatment remarkably improves the photocurrent density of the TiO2 nanoflakes and has the highest impact on the sample treated in the NaOH alkali solution. For the nanoflakes produced in NaOH alkali solution, the bandgap is... 

Carbon nanotubes are widely used in the design of nanosensors and actuators. Any defect in the manufactured nanotube plays an important role in the natural frequencies of these structures. In this paper, the effect of vacancy defects on the vibration of carbon nanotubes is investigated by using an atomistic modeling technique, called the molecular structural mechanics method. Vibration analysis is performed for armchair and zigzag nanotubes with cantilever boundary condition. The shift of the principal frequency of the nanotube with vacancy defect at different locations on the length is plotted. The results indicate that the frequency of the defective nanotube can be larger or smaller or... 

Aperiodic perforated graphene layers were synthesized and used in fabrication of optical nanocavity absorbers. Chemical vapor deposition-grown graphene (Gr) layers were exposed to oxygen plasma etching to obtain the perforated graphene (pGr). The fabricated pGr/SiO2 (68 nm)/Ag (150 nm) nanocavity could present significant higher optical absorption, especially at around 530 nm wavelength region, as compared to a benchmark Gr/SiO2 (68 nm)/Ag (150 nm) sample. The effect of pore size of the pGr layer on the absorption property of the nanocavity has been studied by both experimental and numerical methods. The dependence of the absorption property of the nanocavity on the incident angles of... 

Synthesis of poly(2,5-dimethoxyanilie) (PDMA) catalyzed by nano reengineered horseradish peroxidase (HRP) with dendritic macromolecules, was studied as a function of reaction media. UV-vis, gel permeation chromatography and conductivity measurements were used to explain how the reaction media compositions influence the physical properties of PDMA. Nanostructured PDMA was also synthesized by oxidative polymerization in a novel and green bi-catalyst system involving HRP and ferric chloride. FTIR and UV-vis analysis confirmed the formation of emeraldine salt state of PDMA. The thermal stability of reengineered HRP granted further studies on the polymerization using bi-catalyst system at... 

In this investigation, sol-gel synthesized nanoporous silica thin films, annealed at different temperatures, with long time superhydrophilic property have been studied. Two kinds of sol-gel silica thin films were fabricated by dip-coating of glass substrates in two different solutions; with low and high water. The transparent coated films were dried at 100 °C and then annealed in a temperature range of 200-500 °C. The average water contact angle of the silica films prepared with low water content and annealed at 300 °C measured about 5° for a long time (6 months) without any UV irradiation. Instead, adding water into the sol resulted in silica films with an average water contact angle... 

It is of interest to explore transfer of fluid through nanopores because of widespread applications for such systems. Carbon Nanotubes (CNTs) with their exceptional properties are the best candidates as building blocks for nanostructures. Water transfer in lots of biological systems acts as an important role for keeping the tissue working properly. Peptide nanotube is one of the best biological channels which was proposed recently. While the mechanism of water permeation through channels is very complex, however, investigations such as effect of charge distributions and temperature on water permeation could shed light on the determinants of water and proton conduction rates in biol ogical... 

Finite element (FE) method is used to model radial deformation of single-walled carbon nanotube (SWCNT) under hydrostatic pressure. Elastic deformation of the nanostructure is simulated via elastic beams. Properties of the beam element are calculated by considering the stiffness of the covalent bonds between the carbon atoms in the hexagonal lattice. By applying the beam elements in a three-dimensional space, elastic properties of the SWCNT in transverse direction are obtained. In this regard, influences of diameter and tube wall thickness on the radial and circumferential elastic moduli of zigzag and armchair SWCNTs are considered. It is observed that there is a good agreement between the... 

An impedimetric human papilloma virus (HPV) DNA biosensor based on gold nanotubes (AuNTs) in label free detection was materialized. The AuNTs decorated nanoporous polycarbonate (AuNTs-PC) template as biosensor electrode was fabricated by electrodeposition method. The single strand DNA (ss-DNA) probe was covalently immobilized onto the AuNTs-PC electrode. The hybridization of target sequences with the ss-DNA probe was observed by the electrochemical impedance spectroscopy (EIS). The biosensor showed high selectivity and could differentiate between the complementary, mismatch and non-complementary DNA sequences. The EIS measurements were matched to Randle's equivalent circuit. The... 

The preparation and electrochemical performance of the carbon nanotube-paste electrode modified with salophen complexes of cobalt(III) perchlorate, with various substituents on the salophen ligand, as well as their electrocatalytic activity toward the oxidation of N-acetylcysteine (NAC) is investigated. Several Schiff base complexes containing various nucleophilic and electrophilic functional groups were prepared, and their electrochemical characteristics for the electro-oxidation of NAC were evaluated using cyclic and differential pulse voltammetry (CV and DPV). The results revealed, the modified electrodes show an efficient and selective electrocatalytic activity toward the anodic... 

The performance of cellular solids in biomedical applications relies strongly on a detailed understanding of the effects of pore topology on mechanical properties. This study aims at characterizing the failure mechanism of scaffolds based on nodal connectivity (number of struts that meet in joints) and geometry of the pores. Plastic models of scaffolds having the same relative density but different cubic and trigonal unit cells were designed and then fabricated via three dimensional (3-D) printing. Unit cells were repeated in different arrangements in 3-D space. An in-situ imaging technique was utilized to study the progressive deformation of the scaffold models. Different nodal...