Sharif Digital Repository

In the present study, first, Fe3O4nanoparticles were functionalized using glutaric acid and then composited with CQDs. Doxorubicin (DOX) drug was loaded to evaluate the performance of the nanocomposite for targeted drug delivery applications. The XRD pattern confirmed the presence of characteristic peaks of CQDs and Fe3O4. In the FTIR spectrum, the presence of carboxyl functional groups on Fe3O4/CQDs was observed; DOX (positive charge) is loaded onto Fe3O4/CQDs (negative charge) by electrostatic absorption. FESEM and AFM images showed that the particle sizes of Fe3O4and CQDs were 23-75 and 1-3 nm, respectively. The hysteresis curves showed superparamagnetic properties for Fe3O4and Fe3O4/CQDs... 

Binding of the SARS-CoV-2 S-glycoprotein to cell receptors is vital for the entry of the virus into cells and subsequent infection. ACE2 is the main cell receptor for SARS-CoV-2, which can attach to the C-terminal receptor-binding domain (RBD) of the SARS-CoV-2 S-glycoprotein. The GRP78 receptor plays an anchoring role, which attaches to the RBD and increases the chance of other RBDs binding to ACE2. Although high levels of reactive oxygen and nitrogen species (RONS) are produced during viral infections, it is not clear how they affect the RBD structure and its binding to ACE2 and GRP78. In this research, we apply molecular dynamics simulations to study the effect of oxidation of the highly... 

Hypothesis: It is now being increasingly accepted that cells in their native tissue show different morphologies than those grown on a culture plate. Culturing cells on the conventional two-dimensional (2D) culture plates does not closely resemble the in vivo three-dimensional (3D) structure of cells which in turn seems to affect cellular function. This is one of the reasons, among many others, that nanoparticles uptake and toxicology data from 2D culture plates and in vivo environments are not correlated with one another. In this study, we offer a novel platform technology for producing more in vivo-like models of in vitro cell culture. Experiments: The normal fibroblast cells (HU02) were... 

High rates of mortality and morbidity stemming from cardiovascular diseases unveil extreme limitations in current therapies despite enormous advances in medical and pharmaceutical sciences. Following myocardial infarction (MI), parts of myocardium undergo irreversible remodeling and is substituted by a scar tissue which eventually leads to heart failure (HF). To address this issue, cardiac patches have been utilized to initiate myocardial regeneration. In this study, a porous cardiac patch is fabricated using a mixture of decellularized myocardium extracellular matrix (ECM) and chitosan (CS). Results of rheological measurements, SEM, biodegradation test, and MTT assay showed that the... 

Retinal pigment epithelial (RPE) cells are indispensable for eye organogenesis and vision. To realize the therapeutic potential of in vitro-generated RPE cells for cell-replacement therapy of RPE-related retinopathies, molecular mechanisms of RPE specification and maturation need to be investigated. So far, many attempts have been made to decipher the regulatory networks involved in the differentiation of human pluripotent stem cells into RPE cells. Here, we exploited a highly-efficient RPE differentiation protocol to determine global expression patterns of microRNAs (miRNAs) during human embryonic stem cell (hESC) differentiation into RPE using small RNA sequencing. Our results revealed a... 

In the present study, the applicability and accuracy of a cell-vertex finite volume method developed are assessed in simulating 2D fluid–structure interaction in inviscid compressible flows where the nonlinear phenomena exist in both the unsteady transonic fluid flows and the large nonlinear deformation of solid structures. The unsteady Euler equations are considered as the governing equations of the fluid flow in the arbitrary Lagrangian–Eulerian form and the large nonlinear deformation of the solid structure is considered to be governed by the Cauchy equations in the total Lagrangian form. Both the domains are discretized by a second-order central-difference cell-vertex finite volume... 

With current memory scalability challenges, Phase-Change Memory (PCM) is viewed as an attractive replacement to DRAM. The preliminary concern for PCM applicability is its limited write endurance that results in fast wear-out of memory cells. Worse, process variation in the deep-nanometer regime increases the variation in cell lifetime, resulting in an early and sudden reduction in main memory capacity due to the wear-out of a few cells. Recent studies have proposed redirection or correction schemes to alleviate this problem, but all suffer poor throughput or latency. In this article, we show that one of the inefficiency sources in current schemes, even when wear-leveling algorithms are used,... 

Although phase change memory with multi-bit storage capability (known as MLC PCM) offers a good combination of high bit-density and non-volatility, its performance is severely impacted by the increased read/write latency. Regarding read operation, access latency increases almost linearly with respect to cell density (the number of bits stored in a cell). Since reads are latency critical, they can seriously impact system performance. This paper alleviates the problem of slow reads in the MLC PCM by exploiting a fundamental property of MLC devices: the Most-Significant Bit (MSB) of MLC cells can be read as fast as SLC cells, while reading the Least-Significant Bits (LSBs) is slower. We propose... 

Bioinspired materials can mimic the stem cell environment and modulate stem cell differentiation and proliferation. In this study, biomimetic micro/nanoenvironments were fabricated by cell-imprinted substrates based on mature human keratinocyte morphological templates. The data obtained from atomic force microscopy and field emission scanning electron microscopy revealed that the keratinocyte-cell-imprinted poly(dimethylsiloxane) casting procedure could imitate the surface morphology of the plasma membrane, ranging from the nanoscale to the macroscale, which may provide the required topographical cell fingerprints to induce differentiation. Gene expression levels of the genes analyzed... 

In this paper, a two-dimensional, two-phase, non-isothermal model is presented to predict the electrochemical, mass transfer and heat transfer behaviors in a direct methanol fuel cell (DMFC). Governing equations including the momentum, continuity, heat transfer, proton and electron transport, species transport for water, methanol, and all the gas species (carbon dioxide, methanol vapor, water vapor, oxygen, and nitrogen) and the auxiliary equations are coupled to studying the various phenomena in DMFC. The modeling results agree well with the four different experimental data in an extensive range of operation conditions. A parametric study is also performed to examine the effects of the cell... 

During any microbial enhanced oil recovery process, both cells and the metabolic products of bacteria govern the tertiary oil recovery efficiency. However, very accurate examination is needed to find the functionality of these tiny creatures at different reservoir conditions. In this regard, the effect of cell structure on ultimate microbial recovery efficiency which is the most dominant mechanism based on the microorganism types (gram-negative or gram-positive) was systematically investigated. At the first stage, possible different active mechanisms using Bacillus stearothermophilus SUCPM#14 strain were tested using specially designed injection protocol, in situ and ex situ core flooding... 

TOR is one of the most famous anonymity networks. TOR works correctly when at least one honest relay exists along an established circuit. However, many attacks reveal anonymity of TOR communications by watermarking traffics, changing timings, counting cells per packets, and recently, introducing errors in cells. This paper focuses on protocol-level attacks which can de-anonymize users by changing a cell, and provides a solution for this attack by changing the way integrities of cells are checked. The proposed design allows all relays, not just the exit node, to check the integrity of cells, independently. In addition, this paper proposes a novel method, based on the concept of... 

A fast statistical method for the analysis of the Read SNM of a 6 T SRAM cell in near/subthreshold region is proposed. The method is based on the nonlinear behavior of the cell. DIBL and body effects are thoroughly considered in the derivation of an accurate closed form solution for the Read Static Noise Margin (SNM) of the near/subthreshold SRAM cell. This method uses the state space equation to derive the Read SNM of the cell as a function of threshold voltage of cell transistors. This function shows the dependency of the Read SNM on sizing, VDD, temperature, and threshold voltage variations. It provides a fast reliability analysis for a cell array of a given size and a supply voltage. It... 

Using density functional theory combined with non-equilibrium Green's function method, we have investigated the electronic and transport properties of graphenes defected by one and two carbon ad-dimers (CADs), placed parallel to the graphene lattice. Addition of these CADs to graphenes creates 3D paired pentagon-heptagon defects (3D-PPHDs). The band structure, density of states (DOS), quantum conductance, projected DOS, as well as the current-voltage characteristic per graphene super-cells containing each type of 3D-PPHD are calculated. The local strain introduced to graphene by 3D-PPHDs forces the C-bonds in the dimers to hybridize in sp 3-like rather than sp 2-like orbitals, creating... 

This brief introduces a differential eight-transistor static random access memory (SRAM) cell for subthreshold SRAM applications. The symmetric topology offers a smaller area overhead compared with other symmetric cells for the same stability in the read operation. Two transistors isolate the cell storage nodes from the read operation path to maintain the data stability of the cell. This topology improves the data stability at the expense of read operation delay. Thorough postlayout Monte Carlo worst corner simulations in 45-nm CMOS technology are conducted. The proposed cell operates down to 0.35 V with a read noise margin of 74 mV and a write noise margin of 92 mV. Under this condition,... 

Graphene nanogrids (crossed graphene nanoribbons synthesized by the oxidative unzipping of multi-walled carbon nanotubes) on a SiO2 matrix containing TiO2 nanoparticles (NPs) were applied as a photocatalytic stimulator in the accelerated differentiation of human neural stem cells (hNSCs) into two-dimensional neural networks. The hydrophilic graphene nanogrids exhibited patterned proliferations of hNSCs (consistent with patterns of the nanogrids), in contrast with the usual random growths occurring on quartz substrates. The number of cell nuclei differentiated on reduced graphene oxide nanoribbon (rGONR) grid/TiO2 NPs/SiO2 increased ∼5.9 and 26.8 fold compared to the number of cells on quartz... 

For the application of human neural stem cells (hNSCs) in neural regeneration and brain repair, it is necessary to stimulate hNSC differentiation towards neurons rather than glia. Due to the unique properties of graphene in stem cell differentiation, here we introduce reduced graphene oxide (rGO)/TiO2 heterojunction film as a biocompatible flash photo stimulator for effective differentiation of hNSCs into neurons. Using the stimulation, the number of cell nuclei on rGO/TiO2 increased by a factor of ∼1.5, while on GO/TiO2 and TiO2 it increased only ∼48 and 24%, respectively. Moreover, under optimum conditions of flash photo stimulation (10 mW cm-2 flash intensity and 15.0 mM ascorbic acid in... 

Escherichia coli is widely used host for the intracellular expression of many proteins. However, in some cases also secretion of protein from periplasm was observed. Improvement of both intracellular and extracellular production of recombinant protein in E. coli is an attractive goal in order to reduce production cost and increase process efficiency and economics. Since heat shock proteins in E. coli were reported to be helpful for protein refolding and hindering aggregation, in this work different types of single and periodic heat shocks were tested on lab scale to enhance intracellular and extracellular protein production. A single heat shock prior to induction and different oscillatory... 

Controlling topographic features at all length scales is of great importance for the interaction of cells with tissue regenerative materials. We utilized an indirect three-dimensional printing method to fabricate polymeric scaffolds with pre-defined and controlled external and internal architecture that had an interconnected structure with macro- (400-500 μm) and micro- (∼25 μm) porosity. Polycaprolactone (PCL) was used as model system to study the kinetics of tissue growth within porous scaffolds. The surface of the scaffolds was decorated with TiO2 and bioactive glass (BG) nanoparticles to the better match to nanoarchitecture of extracellular matrix (ECM). Micrometric BG particles were... 

As technology scales the area constraint is becoming less restrictive, but soft error rate and leakage current are drastically increased with technology down scaling. Therefore, in nano-scaled CMOS technology, the reduction of soft error rate and leakage current is the most important challenge in designing field programmable gate arrays (FPGA). To overcome these difficulties, based on the observations that most configuration bit-streams of FPGA are zeros across different designs and that configuration memory cells are not directly involved with signal propagation delays in FPGA, this paper presents a new family of configuration memory cells for FPGAs in nano-scaled CMOS technology. When...